FFCP PHASE1:Mm9::chr7:31411164..31411183,-: Difference between revisions
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{{FFCP|EntrezGene=110323|HGNC=|UniProt=P56391|association_with_transcript=0bp_to_ENSMUST00000075738,NM_025628,uc009gfl.1_5end|description=CAGE_peak_3_at_Cox6b1_5end|id=chr7:31411164..31411183,-|ontology_enrichment_celltype=CL:0000117!3.36e-10!23;CL:0000337!3.36e-10!23;CL:0002319!5.02e-08!43;CL:0000221!5.36e-08!44;CL:0000133!5.36e-08!44;CL:0000055!3.45e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.36e-10,23;CL:0000337,3.36e-10,23;CL:0002319,5.02e-08,43;CL:0000221,5.36e-08,44;CL:0000133,5.36e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.37e-17!73;UBERON:0005743!4.37e-17!73;UBERON:0000073!4.55e-16!75;UBERON:0001016!4.55e-16!75;UBERON:0001049!4.95e-16!52;UBERON:0005068!4.95e-16!52;UBERON:0006241!4.95e-16!52;UBERON:0007135!4.95e-16!52;UBERON:0002020!2.62e-15!34;UBERON:0000955!7.84e-15!50;UBERON:0006238!7.84e-15!50;UBERON:0002616!2.02e-14!49;UBERON:0002791!1.16e-12!29;UBERON:0003528!1.16e-12!29;UBERON:0001893!1.16e-12!29;UBERON:0002346!1.31e-12!71;UBERON:0003075!1.31e-12!71;UBERON:0007284!1.31e-12!71;UBERON:0004121!3.00e-12!102;UBERON:0000924!3.00e-12!102;UBERON:0006601!3.00e-12!102;UBERON:0000033!9.45e-12!63;UBERON:0004111!1.63e-11!122;UBERON:0000025!1.97e-11!114;UBERON:0003080!2.72e-11!40;UBERON:0003103!3.53e-11!43;UBERON:0002780!5.09e-11!39;UBERON:0001890!5.09e-11!39;UBERON:0006240!5.09e-11!39;UBERON:0000956!2.96e-10!21;UBERON:0001869!2.96e-10!21;UBERON:0000203!2.96e-10!21;UBERON:0007100!3.38e-09!18;UBERON:0000948!3.38e-09!18;UBERON:0005498!3.38e-09!18;UBERON:0004140!3.38e-09!18;UBERON:0009881!3.38e-09!18;UBERON:0004141!3.38e-09!18;UBERON:0003084!3.38e-09!18;UBERON:0007005!3.38e-09!18;UBERON:0004139!3.38e-09!18;UBERON:0004291!3.38e-09!18;UBERON:0002619!5.10e-09!17;UBERON:0003056!1.74e-08!49;UBERON:0002021!8.29e-07!10;UBERON:0000411!8.29e-07!10;UBERON:0001950!8.29e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.36e-21,92;UBERON:0001017,4.37e-17,73;UBERON:0000073,4.59e-17,54;UBERON:0001016,4.55e-16,75;UBERON:0001049,4.95e-16,52;UBERON:0005068,4.95e-16,52;UBERON:0006241,4.95e-16,52;UBERON:0007135,4.95e-16,52;UBERON:0002020,2.62e-15,34;UBERON:0000955,2.62e-13,47;UBERON:0006238,2.62e-13,47;UBERON:0002616,6.61e-13,46;UBERON:0003528,1.16e-12,29;UBERON:0002791,1.16e-12,29;UBERON:0001893,1.16e-12,29;UBERON:0002346,1.43e-12,64;UBERON:0003075,1.43e-12,64;UBERON:0007284,1.43e-12,64;UBERON:0004121,6.01e-12,95;UBERON:0000924,6.01e-12,95;UBERON:0006601,6.01e-12,95;UBERON:0004111,1.63e-11,122;UBERON:0000025,1.97e-11,114;UBERON:0003080,2.72e-11,40;UBERON:0003103,3.53e-11,43;UBERON:0002780,5.09e-11,39;UBERON:0001890,5.09e-11,39;UBERON:0006240,5.09e-11,39;UBERON:0010371,1.27e-10,73;UBERON:0000956,2.96e-10,21;UBERON:0001869,2.96e-10,21;UBERON:0000203,2.96e-10,21;UBERON:0007100,3.38e-09,18;UBERON:0000948,3.38e-09,18;UBERON:0005498,3.38e-09,18;UBERON:0004140,3.38e-09,18;UBERON:0009881,3.38e-09,18;UBERON:0004141,3.38e-09,18;UBERON:0003084,3.38e-09,18;UBERON:0007005,3.38e-09,18;UBERON:0004139,3.38e-09,18;UBERON:0004291,3.38e-09,18;UBERON:0002619,5.10e-09,17;UBERON:0003056,1.74e-08,49;UBERON:0002021,8.29e-07,10;UBERON:0000411,8.29e-07,10;UBERON:0001950,8.29e-07,10|phase1_expression=20.0186058880992,16.7508195666893,12.2849794635175,6.35174843744343,6.01074875935617,11.0800319461847,11.6806320297763,9.29687928779349,7.46180227403834,5.85161315804984,8.04724450659873,3.90883579077148,8.38883576662908,7.25589340077678,15.3230490435205,12.755941845559,22.3859801001007,9.93705820878449,7.67840828192137,11.0341309467488,14.2022294552287,15.4893883873381,15.9331871374751,16.3192271249275,17.4351053611049,26.988902313406,20.2458138194765,11.635446565038,24.3229976904159,27.9753444033523,21.7295900442199,24.131165591466,14.7615549020297,0,25.7077941578634,29.4235322284531,30.0128953705683,16.3227335987394,21.0960543021426,13.088093599345,10.5881667845583,12.294818729252,14.0798002379035,12.5896817975577,12.5707394712198,16.152114190228,57.1145681374069,31.3956225187843,27.460772841809,23.7204476870626,30.0970806494529,37.3756667348926,9.56360854529097,13.0565185562042,15.1242209614109,31.9001700684574,28.0802771139982,30.9403255366465,21.8501777728366,36.5003775697703,46.2696924559511,49.4713016820933,54.2469825627795,26.5470416598013,33.6214563272771,32.6820852875206,32.0572118254693,38.4218305321555,24.7818173417262,46.4420427861016,32.1797190867615,57.7014988495683,49.2536846322098,38.7070925519255,28.9453322475074,74.4567217154117,36.3382407297983,51.8410592625862,34.2542569161423,25.190280956467,25.2505896342651,21.8783615633839,70.9124817463508,56.276261003168,35.9075882275504,32.9984015730508,40.4335573469452,33.1791013569035,16.2054053733014,15.1898835814639,4.05810284182349,19.7897491705719,24.478968013479,39.3983329895607,32.4888208723835,25.5375325645481,15.0275529540974,12.1005529030421,15.0675882669664,13.4269038313929,21.8307300653855,1.28326477414318,2.54805239706646,0,29.4427815775251,23.5624674891842,20.2209778005913,12.4460428893775,6.73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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110323 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P56391 | |||
|association_with_transcript=0bp_to_ENSMUST00000075738,NM_025628,uc009gfl.1_5end | |||
|cluster_id=chr7:31411164..31411183,- | |||
|description=CAGE_peak_3_at_Cox6b1_5end | |||
|id=chr7:31411164..31411183,- | |||
|ontology_enrichment_celltype=CL:0000117!3.36e-10!23;CL:0000337!3.36e-10!23;CL:0002319!5.02e-08!43;CL:0000221!5.36e-08!44;CL:0000133!5.36e-08!44;CL:0000055!3.45e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.36e-10,23;CL:0000337,3.36e-10,23;CL:0002319,5.02e-08,43;CL:0000221,5.36e-08,44;CL:0000133,5.36e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.37e-17!73;UBERON:0005743!4.37e-17!73;UBERON:0000073!4.55e-16!75;UBERON:0001016!4.55e-16!75;UBERON:0001049!4.95e-16!52;UBERON:0005068!4.95e-16!52;UBERON:0006241!4.95e-16!52;UBERON:0007135!4.95e-16!52;UBERON:0002020!2.62e-15!34;UBERON:0000955!7.84e-15!50;UBERON:0006238!7.84e-15!50;UBERON:0002616!2.02e-14!49;UBERON:0002791!1.16e-12!29;UBERON:0003528!1.16e-12!29;UBERON:0001893!1.16e-12!29;UBERON:0002346!1.31e-12!71;UBERON:0003075!1.31e-12!71;UBERON:0007284!1.31e-12!71;UBERON:0004121!3.00e-12!102;UBERON:0000924!3.00e-12!102;UBERON:0006601!3.00e-12!102;UBERON:0000033!9.45e-12!63;UBERON:0004111!1.63e-11!122;UBERON:0000025!1.97e-11!114;UBERON:0003080!2.72e-11!40;UBERON:0003103!3.53e-11!43;UBERON:0002780!5.09e-11!39;UBERON:0001890!5.09e-11!39;UBERON:0006240!5.09e-11!39;UBERON:0000956!2.96e-10!21;UBERON:0001869!2.96e-10!21;UBERON:0000203!2.96e-10!21;UBERON:0007100!3.38e-09!18;UBERON:0000948!3.38e-09!18;UBERON:0005498!3.38e-09!18;UBERON:0004140!3.38e-09!18;UBERON:0009881!3.38e-09!18;UBERON:0004141!3.38e-09!18;UBERON:0003084!3.38e-09!18;UBERON:0007005!3.38e-09!18;UBERON:0004139!3.38e-09!18;UBERON:0004291!3.38e-09!18;UBERON:0002619!5.10e-09!17;UBERON:0003056!1.74e-08!49;UBERON:0002021!8.29e-07!10;UBERON:0000411!8.29e-07!10;UBERON:0001950!8.29e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.36e-21,92;UBERON:0001017,4.37e-17,73;UBERON:0000073,4.59e-17,54;UBERON:0001016,4.55e-16,75;UBERON:0001049,4.95e-16,52;UBERON:0005068,4.95e-16,52;UBERON:0006241,4.95e-16,52;UBERON:0007135,4.95e-16,52;UBERON:0002020,2.62e-15,34;UBERON:0000955,2.62e-13,47;UBERON:0006238,2.62e-13,47;UBERON:0002616,6.61e-13,46;UBERON:0003528,1.16e-12,29;UBERON:0002791,1.16e-12,29;UBERON:0001893,1.16e-12,29;UBERON:0002346,1.43e-12,64;UBERON:0003075,1.43e-12,64;UBERON:0007284,1.43e-12,64;UBERON:0004121,6.01e-12,95;UBERON:0000924,6.01e-12,95;UBERON:0006601,6.01e-12,95;UBERON:0004111,1.63e-11,122;UBERON:0000025,1.97e-11,114;UBERON:0003080,2.72e-11,40;UBERON:0003103,3.53e-11,43;UBERON:0002780,5.09e-11,39;UBERON:0001890,5.09e-11,39;UBERON:0006240,5.09e-11,39;UBERON:0010371,1.27e-10,73;UBERON:0000956,2.96e-10,21;UBERON:0001869,2.96e-10,21;UBERON:0000203,2.96e-10,21;UBERON:0007100,3.38e-09,18;UBERON:0000948,3.38e-09,18;UBERON:0005498,3.38e-09,18;UBERON:0004140,3.38e-09,18;UBERON:0009881,3.38e-09,18;UBERON:0004141,3.38e-09,18;UBERON:0003084,3.38e-09,18;UBERON:0007005,3.38e-09,18;UBERON:0004139,3.38e-09,18;UBERON:0004291,3.38e-09,18;UBERON:0002619,5.10e-09,17;UBERON:0003056,1.74e-08,49;UBERON:0002021,8.29e-07,10;UBERON:0000411,8.29e-07,10;UBERON:0001950,8.29e-07,10 | |||
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| |||
|short_description=p3@Cox6b1 | |||
}} |
Revision as of 01:32, 5 August 2015
Short description: | p3@Cox6b1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cox6b1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000075738, NM_025628, uc009gfl.1_5end |
EntrezGene: | 110323 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.36e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.36e-10 | 23 |
neural cell | 5.02e-08 | 43 |
ectodermal cell | 5.36e-08 | 44 |
neurectodermal cell | 5.36e-08 | 44 |