FFCP PHASE1:Mm9::chr7:31845114..31845162,+: Difference between revisions
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{{FFCP|EntrezGene=243914|HGNC=|MCL_coexpression_id=3489|UniProt=|association_with_transcript=-423bp_to_ENSMUST00000169785_5end|description=CAGE_peak_3_at_Lgi4_5end|id=chr7:31845114..31845162,+|ontology_enrichment_celltype=CL:0000221!1.12e-11!44;CL:0000133!1.12e-11!44;CL:0002319!4.09e-11!43;CL:0000540!6.02e-09!33;CL:0000047!6.02e-09!33;CL:0000031!6.02e-09!33;CL:0000404!6.02e-09!33;CL:0000055!1.00e-08!50;CL:0000107!1.14e-08!9;CL:0000393!4.88e-07!39;CL:0000211!4.88e-07!39|ontology_enrichment_celltype_v019_2=CL:0000221,3.42e-20,44;CL:0000133,3.42e-20,44;CL:0002319,4.73e-19,43;CL:0000540,4.51e-17,33;CL:0000047,4.51e-17,33;CL:0000031,4.51e-17,33;CL:0000404,4.51e-17,33;CL:0000107,1.20e-16,9;CL:0000393,1.46e-13,39;CL:0000211,1.46e-13,39;CL:0002321,4.87e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.00e-22!102;UBERON:0000924!3.00e-22!102;UBERON:0006601!3.00e-22!102;UBERON:0000073!7.34e-21!75;UBERON:0001016!7.34e-21!75;UBERON:0001017!1.06e-19!73;UBERON:0005743!1.06e-19!73;UBERON:0002346!5.87e-12!71;UBERON:0003075!5.87e-12!71;UBERON:0007284!5.87e-12!71;UBERON:0000010!1.14e-09!11;UBERON:0000033!2.33e-09!63;UBERON:0001049!2.83e-09!52;UBERON:0005068!2.83e-09!52;UBERON:0006241!2.83e-09!52;UBERON:0007135!2.83e-09!52;UBERON:0000955!7.83e-09!50;UBERON:0006238!7.83e-09!50;UBERON:0002410!1.14e-08!9;UBERON:0002616!2.48e-08!49;UBERON:0002020!5.66e-08!34;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10;UBERON:0003076!9.52e-07!12;UBERON:0003057!9.52e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.44e-41,75;UBERON:0001017,9.73e-39,73;UBERON:0004121,1.15e-31,95;UBERON:0000924,1.15e-31,95;UBERON:0006601,1.15e-31,95;UBERON:0000073,9.20e-21,54;UBERON:0000010,9.10e-19,11;UBERON:0001049,2.51e-18,52;UBERON:0005068,2.51e-18,52;UBERON:0006241,2.51e-18,52;UBERON:0007135,2.51e-18,52;UBERON:0002346,9.25e-18,64;UBERON:0003075,9.25e-18,64;UBERON:0007284,9.25e-18,64;UBERON:0010371,5.99e-17,73;UBERON:0002410,1.20e-16,9;UBERON:0000955,7.85e-15,47;UBERON:0006238,7.85e-15,47;UBERON:0002020,3.37e-14,34;UBERON:0002021,5.14e-14,10;UBERON:0000411,5.14e-14,10;UBERON:0001950,5.14e-14,10;UBERON:0002616,8.13e-14,46;UBERON:0010314,2.04e-13,92;UBERON:0011216,4.95e-13,194;UBERON:0003528,6.01e-11,29;UBERON:0002791,6.01e-11,29;UBERON:0001893,6.01e-11,29;UBERON:0003080,1.80e-10,40;UBERON:0003076,9.14e-10,12;UBERON:0003057,9.14e-10,12;UBERON:0002780,1.67e-09,39;UBERON:0001890,1.67e-09,39;UBERON:0006240,1.67e-09,39;UBERON:0002619,3.60e-09,17;UBERON:0000956,1.84e-08,21;UBERON:0001869,1.84e-08,21;UBERON:0000203,1.84e-08,21;UBERON:0002950,7.01e-08,4;UBERON:0001891,7.01e-08,4;UBERON:0009616,7.01e-08,4;UBERON:0010286,7.01e-08,4;UBERON:0003056,1.15e-07,49;UBERON:0000011,6.23e-07,3|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0,0.194429899074283,0.55994568650145,2.87505128729943,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,3.59520132622086,4.2264013585371,0,0,0,5.42736870367227,2.65042249141936,0.122490799214954,0.0958454710182364,0,19.82085857989,14.300981865541,15.2070467923681,0,0.0914876436024097,0,15.355064945076,16.8828783009504,15.4326230254578,1.76777151284201,2.70506193518296,0.372798891650601,1.59025005999687,5.06329452715463,0,0,0,0,0,0,0.702222100658759,0,0,0,7.60554466794075,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.346970653532272,0,0.691846491768175,0.452167921657868,1.17588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,1.86391761218122,16.9812862266697,11.7290155815535,0,0,0,0,13.6309481858389,13.2675174817402,0.753926112677186,10.081810571152,5.11430914660661,15.1685272528479,7.78758062725237,0.101839363850316,0.373220911830279,0,0.420883711772948,0,0,0,0,0.272145996605311,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0.584799949701329,0.219550115291051,0.268412837520744,14.930586348053,0,0,0.528901133327089,0.213288250535234,0.232236671860439,0.515469845288373,0,0.22237804384487,0.190225626112559,0,0.329397909448022,1.25667604400135,0.397912944082302,0,0,0,0.597423819763102,0,0.228497025219458,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.318909537314974,0.163863314715738,0.690739927463582,0,0,0,0,0,14.4495530989013,10.5490517932983,0,0.504941854408746,10.7272794601527,14.4462335389756,25.2045375347375,28.6762557543062,28.0726329343817,30.2891887944051,21.0501564870945,22.503701059171,15.8115111178609,8.35435422696698,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0.98931751764888,0.161464426695906,0.120625849856312,0.477489376012546,0.656563598980245,0.582961673259701,20.5822085231666,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.836353184057875,1.52853794622324,1.61837215661785,1.23980183588004,0.523511883968059,0.388844919875379,0,0.56369293868419,0,0,0.194451188344048,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0.965947970160952,0,0,0.428736758158132,0,5.0827665835536,5.06357760157895,2.29158205375759,6.35856774671644,8.90607275701835,3.0215755895588,8.10027000278167,9.00642406448441,10.4222754066367,4.14208249401456,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0.505394423527595,0,0,0.0936415074698824,0.256100609619477,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0.238436189947321,0.581385666529314,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.407412341537585,0,0.474540072496697,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.57386499620653,0.661774257358546,0.927471342481686|short_description=p3@Lgi4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:243914 | |||
|HGNC= | |||
|MCL_coexpression_id=3489 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-423bp_to_ENSMUST00000169785_5end | |||
|cluster_id=chr7:31845114..31845162,+ | |||
|description=CAGE_peak_3_at_Lgi4_5end | |||
|id=chr7:31845114..31845162,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.12e-11!44;CL:0000133!1.12e-11!44;CL:0002319!4.09e-11!43;CL:0000540!6.02e-09!33;CL:0000047!6.02e-09!33;CL:0000031!6.02e-09!33;CL:0000404!6.02e-09!33;CL:0000055!1.00e-08!50;CL:0000107!1.14e-08!9;CL:0000393!4.88e-07!39;CL:0000211!4.88e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.42e-20,44;CL:0000133,3.42e-20,44;CL:0002319,4.73e-19,43;CL:0000540,4.51e-17,33;CL:0000047,4.51e-17,33;CL:0000031,4.51e-17,33;CL:0000404,4.51e-17,33;CL:0000107,1.20e-16,9;CL:0000393,1.46e-13,39;CL:0000211,1.46e-13,39;CL:0002321,4.87e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.00e-22!102;UBERON:0000924!3.00e-22!102;UBERON:0006601!3.00e-22!102;UBERON:0000073!7.34e-21!75;UBERON:0001016!7.34e-21!75;UBERON:0001017!1.06e-19!73;UBERON:0005743!1.06e-19!73;UBERON:0002346!5.87e-12!71;UBERON:0003075!5.87e-12!71;UBERON:0007284!5.87e-12!71;UBERON:0000010!1.14e-09!11;UBERON:0000033!2.33e-09!63;UBERON:0001049!2.83e-09!52;UBERON:0005068!2.83e-09!52;UBERON:0006241!2.83e-09!52;UBERON:0007135!2.83e-09!52;UBERON:0000955!7.83e-09!50;UBERON:0006238!7.83e-09!50;UBERON:0002410!1.14e-08!9;UBERON:0002616!2.48e-08!49;UBERON:0002020!5.66e-08!34;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10;UBERON:0003076!9.52e-07!12;UBERON:0003057!9.52e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.44e-41,75;UBERON:0001017,9.73e-39,73;UBERON:0004121,1.15e-31,95;UBERON:0000924,1.15e-31,95;UBERON:0006601,1.15e-31,95;UBERON:0000073,9.20e-21,54;UBERON:0000010,9.10e-19,11;UBERON:0001049,2.51e-18,52;UBERON:0005068,2.51e-18,52;UBERON:0006241,2.51e-18,52;UBERON:0007135,2.51e-18,52;UBERON:0002346,9.25e-18,64;UBERON:0003075,9.25e-18,64;UBERON:0007284,9.25e-18,64;UBERON:0010371,5.99e-17,73;UBERON:0002410,1.20e-16,9;UBERON:0000955,7.85e-15,47;UBERON:0006238,7.85e-15,47;UBERON:0002020,3.37e-14,34;UBERON:0002021,5.14e-14,10;UBERON:0000411,5.14e-14,10;UBERON:0001950,5.14e-14,10;UBERON:0002616,8.13e-14,46;UBERON:0010314,2.04e-13,92;UBERON:0011216,4.95e-13,194;UBERON:0003528,6.01e-11,29;UBERON:0002791,6.01e-11,29;UBERON:0001893,6.01e-11,29;UBERON:0003080,1.80e-10,40;UBERON:0003076,9.14e-10,12;UBERON:0003057,9.14e-10,12;UBERON:0002780,1.67e-09,39;UBERON:0001890,1.67e-09,39;UBERON:0006240,1.67e-09,39;UBERON:0002619,3.60e-09,17;UBERON:0000956,1.84e-08,21;UBERON:0001869,1.84e-08,21;UBERON:0000203,1.84e-08,21;UBERON:0002950,7.01e-08,4;UBERON:0001891,7.01e-08,4;UBERON:0009616,7.01e-08,4;UBERON:0010286,7.01e-08,4;UBERON:0003056,1.15e-07,49;UBERON:0000011,6.23e-07,3 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0,0.194429899074283,0.55994568650145,2.87505128729943,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,3.59520132622086,4.2264013585371,0,0,0,5.42736870367227,2.65042249141936,0.122490799214954,0.0958454710182364,0,19.82085857989,14.300981865541,15.2070467923681,0,0.0914876436024097,0,15.355064945076,16.8828783009504,15.4326230254578,1.76777151284201,2.70506193518296,0.372798891650601,1.59025005999687,5.06329452715463,0,0,0,0,0,0,0.702222100658759,0,0,0,7.60554466794075,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.346970653532272,0,0.691846491768175,0.452167921657868,1.17588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,1.86391761218122,16.9812862266697,11.7290155815535,0,0,0,0,13.6309481858389,13.2675174817402,0.753926112677186,10.081810571152,5.11430914660661,15.1685272528479,7.78758062725237,0.101839363850316,0.373220911830279,0,0.420883711772948,0,0,0,0,0.272145996605311,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0.584799949701329,0.219550115291051,0.268412837520744,14.930586348053,0,0,0.528901133327089,0.213288250535234,0.232236671860439,0.515469845288373,0,0.22237804384487,0.190225626112559,0,0.329397909448022,1.25667604400135,0.397912944082302,0,0,0,0.597423819763102,0,0.228497025219458,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.318909537314974,0.163863314715738,0.690739927463582,0,0,0,0,0,14.4495530989013,10.5490517932983,0,0.504941854408746,10.7272794601527,14.4462335389756,25.2045375347375,28.6762557543062,28.0726329343817,30.2891887944051,21.0501564870945,22.503701059171,15.8115111178609,8.35435422696698,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0.98931751764888,0.161464426695906,0.120625849856312,0.477489376012546,0.656563598980245,0.582961673259701,20.5822085231666,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.836353184057875,1.52853794622324,1.61837215661785,1.23980183588004,0.523511883968059,0.388844919875379,0,0.56369293868419,0,0,0.194451188344048,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0.965947970160952,0,0,0.428736758158132,0,5.0827665835536,5.06357760157895,2.29158205375759,6.35856774671644,8.90607275701835,3.0215755895588,8.10027000278167,9.00642406448441,10.4222754066367,4.14208249401456,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0.505394423527595,0,0,0.0936415074698824,0.256100609619477,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0.238436189947321,0.581385666529314,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.407412341537585,0,0.474540072496697,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.57386499620653,0.661774257358546,0.927471342481686 | |||
|short_description=p3@Lgi4 | |||
}} |
Revision as of 02:07, 5 August 2015
Short description: | p3@Lgi4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lgi4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3489 |
Association with transcript: | -423bp_to_ENSMUST00000169785_5end |
EntrezGene: | 243914 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.42e-20 | 44 |
neurectodermal cell | 3.42e-20 | 44 |
neural cell | 4.73e-19 | 43 |
neuron | 4.51e-17 | 33 |
neuronal stem cell | 4.51e-17 | 33 |
neuroblast | 4.51e-17 | 33 |
electrically signaling cell | 4.51e-17 | 33 |
autonomic neuron | 1.20e-16 | 9 |
electrically responsive cell | 1.46e-13 | 39 |
electrically active cell | 1.46e-13 | 39 |
embryonic cell | 4.87e-10 | 70 |