FFCP PHASE1:Mm9::chr1:16510148..16510176,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=29819|HGNC=|MCL_coexpression_id=13|UniProt=E2QRQ3,D3Z461|association_with_transcript=0bp_to_ENSMUST00000131257,ENSMUST00000153966_5end|description=CAGE_peak_3_at_Stau2_5end|id=chr1:16510148..16510176,-|ontology_enrichment_celltype=CL:0000117!1.54e-12!23;CL:0000337!1.54e-12!23;CL:0000540!7.36e-11!33;CL:0000047!7.36e-11!33;CL:0000031!7.36e-11!33;CL:0000404!7.36e-11!33;CL:0000393!2.47e-07!39;CL:0000211!2.47e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.56e-16,23;CL:0000337,1.56e-16,23;CL:0000540,7.64e-12,33;CL:0000047,7.64e-12,33;CL:0000031,7.64e-12,33;CL:0000404,7.64e-12,33;CL:0000393,1.14e-08,39;CL:0000211,1.14e-08,39;CL:0002319,4.17e-07,43;CL:0000221,9.09e-07,44;CL:0000133,9.09e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.24e-23!63;UBERON:0002346!2.00e-22!71;UBERON:0003075!2.00e-22!71;UBERON:0007284!2.00e-22!71;UBERON:0001049!4.00e-22!52;UBERON:0005068!4.00e-22!52;UBERON:0006241!4.00e-22!52;UBERON:0007135!4.00e-22!52;UBERON:0001017!5.67e-21!73;UBERON:0005743!5.67e-21!73;UBERON:0000955!1.39e-20!50;UBERON:0006238!1.39e-20!50;UBERON:0002616!5.14e-20!49;UBERON:0004121!1.17e-19!102;UBERON:0000924!1.17e-19!102;UBERON:0006601!1.17e-19!102;UBERON:0000073!1.42e-19!75;UBERON:0001016!1.42e-19!75;UBERON:0003056!1.07e-18!49;UBERON:0002020!1.57e-16!34;UBERON:0003080!2.95e-16!40;UBERON:0002780!1.50e-15!39;UBERON:0001890!1.50e-15!39;UBERON:0006240!1.50e-15!39;UBERON:0000153!8.90e-15!94;UBERON:0002791!2.42e-13!29;UBERON:0003528!2.42e-13!29;UBERON:0001893!2.42e-13!29;UBERON:0007811!7.18e-13!86;UBERON:0000956!8.18e-09!21;UBERON:0001869!8.18e-09!21;UBERON:0000203!8.18e-09!21;UBERON:0000468!9.65e-08!333;UBERON:0002619!2.38e-07!17;UBERON:0002021!5.19e-07!10;UBERON:0000411!5.19e-07!10;UBERON:0001950!5.19e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.08e-31,54;UBERON:0002346,6.66e-30,64;UBERON:0003075,6.66e-30,64;UBERON:0007284,6.66e-30,64;UBERON:0001049,4.55e-29,52;UBERON:0005068,4.55e-29,52;UBERON:0006241,4.55e-29,52;UBERON:0007135,4.55e-29,52;UBERON:0001017,1.47e-26,73;UBERON:0001016,2.79e-25,75;UBERON:0010371,8.50e-25,73;UBERON:0003056,9.17e-25,49;UBERON:0000955,3.47e-24,47;UBERON:0006238,3.47e-24,47;UBERON:0002020,1.58e-23,34;UBERON:0002616,2.12e-23,46;UBERON:0004121,6.14e-23,95;UBERON:0000924,6.14e-23,95;UBERON:0006601,6.14e-23,95;UBERON:0003080,1.07e-21,40;UBERON:0002780,1.07e-20,39;UBERON:0001890,1.07e-20,39;UBERON:0006240,1.07e-20,39;UBERON:0003528,6.24e-19,29;UBERON:0002791,6.24e-19,29;UBERON:0001893,6.24e-19,29;UBERON:0010314,4.54e-17,92;UBERON:0000956,2.08e-12,21;UBERON:0001869,2.08e-12,21;UBERON:0000203,2.08e-12,21;UBERON:0002619,2.58e-10,17;UBERON:0002021,2.28e-09,10;UBERON:0000411,2.28e-09,10;UBERON:0001950,2.28e-09,10;UBERON:0002420,6.95e-08,8;UBERON:0007245,6.95e-08,8;UBERON:0010009,6.95e-08,8;UBERON:0010011,6.95e-08,8;UBERON:0000454,6.95e-08,8;UBERON:0003076,9.10e-08,12;UBERON:0003057,9.10e-08,12;UBERON:0000025,6.27e-07,114;UBERON:0002240,8.21e-07,6;UBERON:0005174,8.21e-07,6;UBERON:0001137,8.21e-07,6|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0,0,0,0.70219357896598,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,3.84401275633236,5.81890077199236,0.633831403506179,0,0,0.449949858640699,0,0,0,0,2.07379224616955,1.4850653216486,1.89292465216244,3.99911378165325,4.63823935998388,3.30725157880376,2.68367318851062,2.75765635983006,4.40463523997555,4.46905683298157,5.22262213071228,4.08847491963601,5.39777097254217,3.64639359389732,3.90856198601933,3.37657566019008,3.20876320331301,6.18720029494702,6.69146899755784,5.03278503728312,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0,0.29688427812965,0.693941307064543,1.52232739156071,0,0.150722640552623,0.587943535678524,0.251333182659351,0.494389935468748,0.289198713839823,0,0.485300549842228,0,0.969750506270444,0,7.02673912827713,2.30391377494801,0,0.11981512450592,0,0.127070227073065,7.33974133083631,6.8625090422794,7.79056983099759,3.65031072403781,6.64860189058859,4.77912502486988,4.05603157669394,1.2220723662038,0.373220911830279,0.505445516867349,0.420883711772948,1.04096354370163,1.37941262660084,2.70093194708024,1.65775299619287,2.31324097114515,1.92170580427275,1.59292931751539,2.06962696591213,4.31135985865684,4.9167580843633,4.39877810409872,1.09597866213787,1.39023624612799,1.74126083261083,0.823128545631774,0.796137067273973,0,0,0.284163499395593,0,0.703578179943289,0.36012412292203,1.18372367792605,0,0.154267112887378,0.465067889500816,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0.402619256281115,2.52347938276953,3.2929475961371,0,0,1.06644125267617,0.696710015581316,0.515469845288373,1.00841762311671,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,1.51734320762465,1.94222471436539,1.1270773567308,1.4255592949172,0.969762435838129,1.1221731182451,0.379419222745544,0.147610147979602,0.31399745568275,0.370191491765402,0,0.667380422864376,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0.505157755894224,0,0,0,1.32643988239339,1.14075483509418,1.01847051465113,0.938760993154008,1.17254380209271,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0.983528546038072,0.275936746304732,5.29816946959713,5.15731421005694,0.327869890753351,0.504941854408746,0.94652465824877,0.780877488593277,0.646270193198397,0,0.668396022247182,1.13230612315533,0,0.876767573733936,1.97643888973262,3.85585579706168,0.425820255624806,1.42452482933804,1.79175655288934,0.659880491890142,0,1.21390318077491,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,1.36175842301515,1.44048875225048,0.646793418913773,1.28602221018955,1.41872186913819,1.24858172321449,0.658196082408484,1.522324745573,0.23467170806371,0.63549621259146,0.441056796109924,0.49465875882444,0.484393280087717,0.301564624640779,0.238744688006273,0.328281799490123,0.291480836629851,5.56275906031529,0,0.619160603889667,0.555583582109135,0,0,0,0.169978429993855,0.979660166265606,0.414599921413271,0,2.37251995185852,1.21991680276109,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,1.04661582230785,0.66183396182839,0.388902376688095,0.516639293910924,0.844780627453891,0.704143431874524,0.781226309063701,1.04859344425711,0.724752362478018,0.864090018773596,0.316011120628178,0.202725215290164,0.924398614483445,0.649604114888975,0.716106782669926,0.198681354781265,0.600977247599844,0.295379054349154,0.100966449948148,0.0762068066549998,0.302478555410522,0,0.192423683280659,0.233753804363138,0.226730383615211,0.221985953374065,0.717710852875806,0.671538465456314,0.19318959403219,0,0.36630324853453,0.214368379079066,0,3.95326289831947,3.22227665555024,8.02053718815155,4.46818274093588,4.11049511862385,5.2877572817279,4.05013500139084,4.05289082901798,5.43770890781046,2.5888015587591,2.90604573235695,3.19219898720825,2.90247129782028,1.70174701947806,1.46729213839588,1.47074806760011,0.888986911206461,2.06035057238894,1.28367683836726,0.758091635291392,1.2673964994512,1.32038438970253,0.749132059759059,0.960377286073039,1.32101578597911,2.38146845641537,1.50649623728312,0.964546102318525,0.824171801606613,1.17759136107518,0.685738504770831,1.06485483695602,1.66905332963125,0.872078499793971,1.59985946706062,1.35383372626682,1.46342378298218,2.36762740294059,0.679020569229309,2.80571135828869,1.66089025373844,1.87158516513571,1.22769312950907,1.08455788830176,1.15743966588685,2.74791635731741,1.63752125911786,1.50409737833809,0.57386499620653,0.661774257358546,0.695603506861264|short_description=p3@Stau2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:29819 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E2QRQ3,uniprot:D3Z461 | |||
|association_with_transcript=0bp_to_ENSMUST00000131257,ENSMUST00000153966_5end | |||
|cluster_id=chr1:16510148..16510176,- | |||
|description=CAGE_peak_3_at_Stau2_5end | |||
|id=chr1:16510148..16510176,- | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-12!23;CL:0000337!1.54e-12!23;CL:0000540!7.36e-11!33;CL:0000047!7.36e-11!33;CL:0000031!7.36e-11!33;CL:0000404!7.36e-11!33;CL:0000393!2.47e-07!39;CL:0000211!2.47e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.56e-16,23;CL:0000337,1.56e-16,23;CL:0000540,7.64e-12,33;CL:0000047,7.64e-12,33;CL:0000031,7.64e-12,33;CL:0000404,7.64e-12,33;CL:0000393,1.14e-08,39;CL:0000211,1.14e-08,39;CL:0002319,4.17e-07,43;CL:0000221,9.09e-07,44;CL:0000133,9.09e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.24e-23!63;UBERON:0002346!2.00e-22!71;UBERON:0003075!2.00e-22!71;UBERON:0007284!2.00e-22!71;UBERON:0001049!4.00e-22!52;UBERON:0005068!4.00e-22!52;UBERON:0006241!4.00e-22!52;UBERON:0007135!4.00e-22!52;UBERON:0001017!5.67e-21!73;UBERON:0005743!5.67e-21!73;UBERON:0000955!1.39e-20!50;UBERON:0006238!1.39e-20!50;UBERON:0002616!5.14e-20!49;UBERON:0004121!1.17e-19!102;UBERON:0000924!1.17e-19!102;UBERON:0006601!1.17e-19!102;UBERON:0000073!1.42e-19!75;UBERON:0001016!1.42e-19!75;UBERON:0003056!1.07e-18!49;UBERON:0002020!1.57e-16!34;UBERON:0003080!2.95e-16!40;UBERON:0002780!1.50e-15!39;UBERON:0001890!1.50e-15!39;UBERON:0006240!1.50e-15!39;UBERON:0000153!8.90e-15!94;UBERON:0002791!2.42e-13!29;UBERON:0003528!2.42e-13!29;UBERON:0001893!2.42e-13!29;UBERON:0007811!7.18e-13!86;UBERON:0000956!8.18e-09!21;UBERON:0001869!8.18e-09!21;UBERON:0000203!8.18e-09!21;UBERON:0000468!9.65e-08!333;UBERON:0002619!2.38e-07!17;UBERON:0002021!5.19e-07!10;UBERON:0000411!5.19e-07!10;UBERON:0001950!5.19e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.08e-31,54;UBERON:0002346,6.66e-30,64;UBERON:0003075,6.66e-30,64;UBERON:0007284,6.66e-30,64;UBERON:0001049,4.55e-29,52;UBERON:0005068,4.55e-29,52;UBERON:0006241,4.55e-29,52;UBERON:0007135,4.55e-29,52;UBERON:0001017,1.47e-26,73;UBERON:0001016,2.79e-25,75;UBERON:0010371,8.50e-25,73;UBERON:0003056,9.17e-25,49;UBERON:0000955,3.47e-24,47;UBERON:0006238,3.47e-24,47;UBERON:0002020,1.58e-23,34;UBERON:0002616,2.12e-23,46;UBERON:0004121,6.14e-23,95;UBERON:0000924,6.14e-23,95;UBERON:0006601,6.14e-23,95;UBERON:0003080,1.07e-21,40;UBERON:0002780,1.07e-20,39;UBERON:0001890,1.07e-20,39;UBERON:0006240,1.07e-20,39;UBERON:0003528,6.24e-19,29;UBERON:0002791,6.24e-19,29;UBERON:0001893,6.24e-19,29;UBERON:0010314,4.54e-17,92;UBERON:0000956,2.08e-12,21;UBERON:0001869,2.08e-12,21;UBERON:0000203,2.08e-12,21;UBERON:0002619,2.58e-10,17;UBERON:0002021,2.28e-09,10;UBERON:0000411,2.28e-09,10;UBERON:0001950,2.28e-09,10;UBERON:0002420,6.95e-08,8;UBERON:0007245,6.95e-08,8;UBERON:0010009,6.95e-08,8;UBERON:0010011,6.95e-08,8;UBERON:0000454,6.95e-08,8;UBERON:0003076,9.10e-08,12;UBERON:0003057,9.10e-08,12;UBERON:0000025,6.27e-07,114;UBERON:0002240,8.21e-07,6;UBERON:0005174,8.21e-07,6;UBERON:0001137,8.21e-07,6 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0,0,0,0.70219357896598,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,3.84401275633236,5.81890077199236,0.633831403506179,0,0,0.449949858640699,0,0,0,0,2.07379224616955,1.4850653216486,1.89292465216244,3.99911378165325,4.63823935998388,3.30725157880376,2.68367318851062,2.75765635983006,4.40463523997555,4.46905683298157,5.22262213071228,4.08847491963601,5.39777097254217,3.64639359389732,3.90856198601933,3.37657566019008,3.20876320331301,6.18720029494702,6.69146899755784,5.03278503728312,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0,0.29688427812965,0.693941307064543,1.52232739156071,0,0.150722640552623,0.587943535678524,0.251333182659351,0.494389935468748,0.289198713839823,0,0.485300549842228,0,0.969750506270444,0,7.02673912827713,2.30391377494801,0,0.11981512450592,0,0.127070227073065,7.33974133083631,6.8625090422794,7.79056983099759,3.65031072403781,6.64860189058859,4.77912502486988,4.05603157669394,1.2220723662038,0.373220911830279,0.505445516867349,0.420883711772948,1.04096354370163,1.37941262660084,2.70093194708024,1.65775299619287,2.31324097114515,1.92170580427275,1.59292931751539,2.06962696591213,4.31135985865684,4.9167580843633,4.39877810409872,1.09597866213787,1.39023624612799,1.74126083261083,0.823128545631774,0.796137067273973,0,0,0.284163499395593,0,0.703578179943289,0.36012412292203,1.18372367792605,0,0.154267112887378,0.465067889500816,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0.402619256281115,2.52347938276953,3.2929475961371,0,0,1.06644125267617,0.696710015581316,0.515469845288373,1.00841762311671,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,1.51734320762465,1.94222471436539,1.1270773567308,1.4255592949172,0.969762435838129,1.1221731182451,0.379419222745544,0.147610147979602,0.31399745568275,0.370191491765402,0,0.667380422864376,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0.505157755894224,0,0,0,1.32643988239339,1.14075483509418,1.01847051465113,0.938760993154008,1.17254380209271,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0,0,0.144649058581512,0,0,0.983528546038072,0.275936746304732,5.29816946959713,5.15731421005694,0.327869890753351,0.504941854408746,0.94652465824877,0.780877488593277,0.646270193198397,0,0.668396022247182,1.13230612315533,0,0.876767573733936,1.97643888973262,3.85585579706168,0.425820255624806,1.42452482933804,1.79175655288934,0.659880491890142,0,1.21390318077491,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,1.36175842301515,1.44048875225048,0.646793418913773,1.28602221018955,1.41872186913819,1.24858172321449,0.658196082408484,1.522324745573,0.23467170806371,0.63549621259146,0.441056796109924,0.49465875882444,0.484393280087717,0.301564624640779,0.238744688006273,0.328281799490123,0.291480836629851,5.56275906031529,0,0.619160603889667,0.555583582109135,0,0,0,0.169978429993855,0.979660166265606,0.414599921413271,0,2.37251995185852,1.21991680276109,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,1.04661582230785,0.66183396182839,0.388902376688095,0.516639293910924,0.844780627453891,0.704143431874524,0.781226309063701,1.04859344425711,0.724752362478018,0.864090018773596,0.316011120628178,0.202725215290164,0.924398614483445,0.649604114888975,0.716106782669926,0.198681354781265,0.600977247599844,0.295379054349154,0.100966449948148,0.0762068066549998,0.302478555410522,0,0.192423683280659,0.233753804363138,0.226730383615211,0.221985953374065,0.717710852875806,0.671538465456314,0.19318959403219,0,0.36630324853453,0.214368379079066,0,3.95326289831947,3.22227665555024,8.02053718815155,4.46818274093588,4.11049511862385,5.2877572817279,4.05013500139084,4.05289082901798,5.43770890781046,2.5888015587591,2.90604573235695,3.19219898720825,2.90247129782028,1.70174701947806,1.46729213839588,1.47074806760011,0.888986911206461,2.06035057238894,1.28367683836726,0.758091635291392,1.2673964994512,1.32038438970253,0.749132059759059,0.960377286073039,1.32101578597911,2.38146845641537,1.50649623728312,0.964546102318525,0.824171801606613,1.17759136107518,0.685738504770831,1.06485483695602,1.66905332963125,0.872078499793971,1.59985946706062,1.35383372626682,1.46342378298218,2.36762740294059,0.679020569229309,2.80571135828869,1.66089025373844,1.87158516513571,1.22769312950907,1.08455788830176,1.15743966588685,2.74791635731741,1.63752125911786,1.50409737833809,0.57386499620653,0.661774257358546,0.695603506861264 | |||
|short_description=p3@Stau2 | |||
}} |
Revision as of 03:27, 5 August 2015
Short description: | p3@Stau2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Stau2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000131257, ENSMUST00000153966_5end |
EntrezGene: | 29819 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.56e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.56e-16 | 23 |
neuron | 7.64e-12 | 33 |
neuronal stem cell | 7.64e-12 | 33 |
neuroblast | 7.64e-12 | 33 |
electrically signaling cell | 7.64e-12 | 33 |
electrically responsive cell | 1.14e-08 | 39 |
electrically active cell | 1.14e-08 | 39 |
neural cell | 4.17e-07 | 43 |
ectodermal cell | 9.09e-07 | 44 |
neurectodermal cell | 9.09e-07 | 44 |