FFCP PHASE1:Mm9::chr15:85501904..85501941,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:85501904..85501941,+|id=chr15:85501904..85501941,+|ontology_enrichment_celltype=CL:0000221!3.52e-13!44;CL:0000133!3.52e-13!44;CL:0002319!6.64e-13!43;CL:0000117!5.09e-12!23;CL:0000337!5.09e-12!23;CL:0000540!8.46e-12!33;CL:0000047!8.46e-12!33;CL:0000031!8.46e-12!33;CL:0000404!8.46e-12!33;CL:0000055!1.56e-09!50;CL:0000393!7.72e-09!39;CL:0000211!7.72e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.50e-17,23;CL:0000337,1.50e-17,23;CL:0000221,5.30e-17,44;CL:0000133,5.30e-17,44;CL:0002319,1.38e-16,43;CL:0000540,6.80e-15,33;CL:0000047,6.80e-15,33;CL:0000031,6.80e-15,33;CL:0000404,6.80e-15,33;CL:0000393,3.61e-11,39;CL:0000211,3.61e-11,39;CL:0002321,1.89e-08,70;CL:0002609,5.99e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.88e-25!73;UBERON:0005743!4.88e-25!73;UBERON:0000073!5.60e-25!75;UBERON:0001016!5.60e-25!75;UBERON:0004121!5.87e-23!102;UBERON:0000924!5.87e-23!102;UBERON:0006601!5.87e-23!102;UBERON:0001049!2.21e-20!52;UBERON:0005068!2.21e-20!52;UBERON:0006241!2.21e-20!52;UBERON:0007135!2.21e-20!52;UBERON:0000955!7.79e-19!50;UBERON:0006238!7.79e-19!50;UBERON:0002346!1.48e-18!71;UBERON:0003075!1.48e-18!71;UBERON:0007284!1.48e-18!71;UBERON:0002616!2.48e-18!49;UBERON:0002020!8.25e-17!34;UBERON:0000033!1.34e-16!63;UBERON:0003080!5.97e-16!40;UBERON:0002780!2.27e-15!39;UBERON:0001890!2.27e-15!39;UBERON:0006240!2.27e-15!39;UBERON:0002791!1.54e-14!29;UBERON:0003528!1.54e-14!29;UBERON:0001893!1.54e-14!29;UBERON:0003056!2.86e-13!49;UBERON:0000956!1.19e-10!21;UBERON:0001869!1.19e-10!21;UBERON:0000203!1.19e-10!21;UBERON:0007811!1.13e-08!86;UBERON:0002619!2.84e-08!17;UBERON:0000153!5.50e-08!94;UBERON:0004111!6.35e-08!122;UBERON:0000025!2.21e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.29e-34,73;UBERON:0001016,2.19e-32,75;UBERON:0000073,4.21e-29,54;UBERON:0001049,1.62e-28,52;UBERON:0005068,1.62e-28,52;UBERON:0006241,1.62e-28,52;UBERON:0007135,1.62e-28,52;UBERON:0004121,1.49e-25,95;UBERON:0000924,1.49e-25,95;UBERON:0006601,1.49e-25,95;UBERON:0000955,9.36e-25,47;UBERON:0006238,9.36e-25,47;UBERON:0002616,5.28e-24,46;UBERON:0002346,5.80e-24,64;UBERON:0003075,5.80e-24,64;UBERON:0007284,5.80e-24,64;UBERON:0010371,1.03e-23,73;UBERON:0002020,8.64e-23,34;UBERON:0003080,4.17e-21,40;UBERON:0002780,3.05e-20,39;UBERON:0001890,3.05e-20,39;UBERON:0006240,3.05e-20,39;UBERON:0003528,2.47e-19,29;UBERON:0002791,2.47e-19,29;UBERON:0001893,2.47e-19,29;UBERON:0003056,4.68e-16,49;UBERON:0010314,1.93e-15,92;UBERON:0000956,1.86e-13,21;UBERON:0001869,1.86e-13,21;UBERON:0000203,1.86e-13,21;UBERON:0002619,6.11e-10,17;UBERON:0000025,9.51e-10,114;UBERON:0004111,1.00e-09,122;UBERON:0000489,7.02e-09,21;UBERON:0003076,7.90e-08,12;UBERON:0003057,7.90e-08,12;UBERON:0002420,4.19e-07,8;UBERON:0007245,4.19e-07,8;UBERON:0010009,4.19e-07,8;UBERON:0010011,4.19e-07,8;UBERON:0000454,4.19e-07,8|phase1_expression=3.36312578920067,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0.42438965179803,1.53077922271926,0.297872853602656,1.04479915655574,0.159992422793407,0.45881856213434,0,0.430761996159075,0.646413698057667,0,0.252030129759931,0,0,0,0,0,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0,11.3373081317832,2.19686182734472,1.74986909166855,3.07970127575798,0,0,0,0,0.257259436035947,0,0,3.43937983461316,2.11596391708813,3.80298842103708,0.338844532069132,0,0,0,0,2.69640099466564,3.45796474789399,4.35496371695606,4.99521971827255,4.6271491497304,3.14216082844184,1.54607978666129,2.20483438586917,2.87536413054709,8.27296907949019,2.20231761998777,1.27687338085188,1.22885226604995,2.63772575460388,2.92760459527711,1.56274011167028,1.67509799400829,3.37657566019008,2.59757021220577,1.47314292736834,3.55929201997757,2.60959224155421,0.908714319998209,0.529000920747499,1.44932244350839,0,0,0,1.29955283489534,0.896053774194671,0.280888840263504,0,0.779358013808606,0,1.40843419776681,0,2.54805239706646,0,0,0.253359865475099,0,0.79928715803342,0,1.03909497345377,0.867426633830679,1.52232739156071,0.691846491768175,0.150722640552623,0.940709657085638,0.251333182659351,0,1.01219549843938,0,1.45590164952668,0.220841518460394,0,0,1.17112318804619,2.93225389538837,0.766371165625774,0.11981512450592,0,0,3.2953940669061,4.57500602818627,2.89005009859588,2.25971616249959,2.04572365864264,3.53239675751252,3.73154905055843,0.305518091550949,1.24406970610093,5.55990068554084,1.89397670297827,0,0.229902104433473,0,0.452114453507145,0.612328492361951,0.768682321709099,0.655912071918102,0.517406741478031,0.215567992932842,0.756424320671277,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0.536546802799238,0.467061369468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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:85501904..85501941,+ | |||
|description=CAGE_peak_at_chr15:85501904..85501941,+ | |||
|id=chr15:85501904..85501941,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.52e-13!44;CL:0000133!3.52e-13!44;CL:0002319!6.64e-13!43;CL:0000117!5.09e-12!23;CL:0000337!5.09e-12!23;CL:0000540!8.46e-12!33;CL:0000047!8.46e-12!33;CL:0000031!8.46e-12!33;CL:0000404!8.46e-12!33;CL:0000055!1.56e-09!50;CL:0000393!7.72e-09!39;CL:0000211!7.72e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.50e-17,23;CL:0000337,1.50e-17,23;CL:0000221,5.30e-17,44;CL:0000133,5.30e-17,44;CL:0002319,1.38e-16,43;CL:0000540,6.80e-15,33;CL:0000047,6.80e-15,33;CL:0000031,6.80e-15,33;CL:0000404,6.80e-15,33;CL:0000393,3.61e-11,39;CL:0000211,3.61e-11,39;CL:0002321,1.89e-08,70;CL:0002609,5.99e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.88e-25!73;UBERON:0005743!4.88e-25!73;UBERON:0000073!5.60e-25!75;UBERON:0001016!5.60e-25!75;UBERON:0004121!5.87e-23!102;UBERON:0000924!5.87e-23!102;UBERON:0006601!5.87e-23!102;UBERON:0001049!2.21e-20!52;UBERON:0005068!2.21e-20!52;UBERON:0006241!2.21e-20!52;UBERON:0007135!2.21e-20!52;UBERON:0000955!7.79e-19!50;UBERON:0006238!7.79e-19!50;UBERON:0002346!1.48e-18!71;UBERON:0003075!1.48e-18!71;UBERON:0007284!1.48e-18!71;UBERON:0002616!2.48e-18!49;UBERON:0002020!8.25e-17!34;UBERON:0000033!1.34e-16!63;UBERON:0003080!5.97e-16!40;UBERON:0002780!2.27e-15!39;UBERON:0001890!2.27e-15!39;UBERON:0006240!2.27e-15!39;UBERON:0002791!1.54e-14!29;UBERON:0003528!1.54e-14!29;UBERON:0001893!1.54e-14!29;UBERON:0003056!2.86e-13!49;UBERON:0000956!1.19e-10!21;UBERON:0001869!1.19e-10!21;UBERON:0000203!1.19e-10!21;UBERON:0007811!1.13e-08!86;UBERON:0002619!2.84e-08!17;UBERON:0000153!5.50e-08!94;UBERON:0004111!6.35e-08!122;UBERON:0000025!2.21e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.29e-34,73;UBERON:0001016,2.19e-32,75;UBERON:0000073,4.21e-29,54;UBERON:0001049,1.62e-28,52;UBERON:0005068,1.62e-28,52;UBERON:0006241,1.62e-28,52;UBERON:0007135,1.62e-28,52;UBERON:0004121,1.49e-25,95;UBERON:0000924,1.49e-25,95;UBERON:0006601,1.49e-25,95;UBERON:0000955,9.36e-25,47;UBERON:0006238,9.36e-25,47;UBERON:0002616,5.28e-24,46;UBERON:0002346,5.80e-24,64;UBERON:0003075,5.80e-24,64;UBERON:0007284,5.80e-24,64;UBERON:0010371,1.03e-23,73;UBERON:0002020,8.64e-23,34;UBERON:0003080,4.17e-21,40;UBERON:0002780,3.05e-20,39;UBERON:0001890,3.05e-20,39;UBERON:0006240,3.05e-20,39;UBERON:0003528,2.47e-19,29;UBERON:0002791,2.47e-19,29;UBERON:0001893,2.47e-19,29;UBERON:0003056,4.68e-16,49;UBERON:0010314,1.93e-15,92;UBERON:0000956,1.86e-13,21;UBERON:0001869,1.86e-13,21;UBERON:0000203,1.86e-13,21;UBERON:0002619,6.11e-10,17;UBERON:0000025,9.51e-10,114;UBERON:0004111,1.00e-09,122;UBERON:0000489,7.02e-09,21;UBERON:0003076,7.90e-08,12;UBERON:0003057,7.90e-08,12;UBERON:0002420,4.19e-07,8;UBERON:0007245,4.19e-07,8;UBERON:0010009,4.19e-07,8;UBERON:0010011,4.19e-07,8;UBERON:0000454,4.19e-07,8 | |||
|phase1_expression=3.36312578920067,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0.42438965179803,1.53077922271926,0.297872853602656,1.04479915655574,0.159992422793407,0.45881856213434,0,0.430761996159075,0.646413698057667,0,0.252030129759931,0,0,0,0,0,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0,11.3373081317832,2.19686182734472,1.74986909166855,3.07970127575798,0,0,0,0,0.257259436035947,0,0,3.43937983461316,2.11596391708813,3.80298842103708,0.338844532069132,0,0,0,0,2.69640099466564,3.45796474789399,4.35496371695606,4.99521971827255,4.6271491497304,3.14216082844184,1.54607978666129,2.20483438586917,2.87536413054709,8.27296907949019,2.20231761998777,1.27687338085188,1.22885226604995,2.63772575460388,2.92760459527711,1.56274011167028,1.67509799400829,3.37657566019008,2.59757021220577,1.47314292736834,3.55929201997757,2.60959224155421,0.908714319998209,0.529000920747499,1.44932244350839,0,0,0,1.29955283489534,0.896053774194671,0.280888840263504,0,0.779358013808606,0,1.40843419776681,0,2.54805239706646,0,0,0.253359865475099,0,0.79928715803342,0,1.03909497345377,0.867426633830679,1.52232739156071,0.691846491768175,0.150722640552623,0.940709657085638,0.251333182659351,0,1.01219549843938,0,1.45590164952668,0.220841518460394,0,0,1.17112318804619,2.93225389538837,0.766371165625774,0.11981512450592,0,0,3.2953940669061,4.57500602818627,2.89005009859588,2.25971616249959,2.04572365864264,3.53239675751252,3.73154905055843,0.305518091550949,1.24406970610093,5.55990068554084,1.89397670297827,0,0.229902104433473,0,0.452114453507145,0.612328492361951,0.768682321709099,0.655912071918102,0.517406741478031,0.215567992932842,0.756424320671277,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0.536546802799238,0.467061369468678,0.329119699826961,1.64167464079095,0.972825714550269,0.877199924551994,0.658650345873152,0.536825675041487,0.841159794256509,6.27718135513635,0,0.528901133327089,0,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.58489226135736,0.898819408654221,0.216138049874694,0.199141273254367,0,1.25673363870702,0,2.03651327845314,2.13347735884388,1.8936671370386,3.66771915320692,3.83786384746966,4.39596437955849,2.71473760627961,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0.757736633841335,0.179397413521912,0.964887042726734,1.10851914099963,0,0.488894929326078,0.509235257325564,1.17345124144251,0.502518772325447,0.238043640886014,0.585400943573396,0.157635144106191,0.221464689648775,0.956728611944923,0.81931657357869,0.690739927463582,1.15719246865209,0,0,0.491764273019036,0.275936746304732,3.21101179975584,2.10981035865966,0,0.504941854408746,1.89304931649754,0.780877488593277,3.66219776145758,0.716906393857656,0.445597348164788,0.566153061577665,0,0.584511715822624,1.58115111178609,2.57057053137446,0.99358059645788,0.178065603667255,0.488660878060728,0.494910368917606,2.65490276679926,0.971122544619926,0,0.754420319023592,1.18120757152309,0,0.516856586336442,1.09060118843252,0.712994756769443,1.58018378967908,2.10837217149998,0,10.5536277783674,0,0.129358683782755,0.643011105094777,0.709360934569094,1.42695054081656,1.48094118541909,2.74018454203139,0.23467170806371,0,0.441056796109924,3.46261131177108,0.807322133479528,0.844380948994182,1.79058516004705,0.984845398470368,0.291480836629851,2.96680483216816,0,0.206386867963223,0.370389054739423,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0.418176592028937,0,0.269728692769641,0.41326727862668,0.523511883968059,0.648074866458964,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.506868376472335,0.234714477291508,0.911430693907651,0.524296722128554,0,0.288030006257865,0.948033361884535,0.608175645870493,0.718976700153791,0,0.537080087002444,0.198681354781265,0.600977247599844,0,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,0.226730383615211,0,0,0,0.579568782096571,0.93841237725591,0.36630324853453,0.428736758158132,1.00314420807073,3.3885110557024,2.30162618253588,3.43737308063638,1.3748254587495,2.05524755931193,2.2661816921691,1.35004500046361,0.900642406448441,2.71885445390523,5.69536342927002,0,2.79317411380722,1.70733605754134,0.972426868273176,0.628839487883947,0.183843508450014,2.00022055021454,1.23621034343337,0.320919209591815,0.758091635291392,0.760437899670719,0.565879024158229,0.749132059759059,1.60062881012173,1.37845125493472,0.952587382566147,0.811190281613988,0.77163688185482,0,1.32479028120958,2.05721551431249,1.59728225543404,0.715308569841963,1.30811774969096,0.470546902076653,0.592302255241736,0.365855945745545,0.526139422875686,0.950628796921032,0,1.06771516311757,1.47756723563345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| |||
|short_description=p@chr15:85501904..85501941,+ | |||
}} |
Latest revision as of 19:02, 5 August 2015
Short description: | p@chr15:85501904..85501941, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:85501904..85501941, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.50e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.50e-17 | 23 |
ectodermal cell | 5.30e-17 | 44 |
neurectodermal cell | 5.30e-17 | 44 |
neural cell | 1.38e-16 | 43 |
neuron | 6.80e-15 | 33 |
neuronal stem cell | 6.80e-15 | 33 |
neuroblast | 6.80e-15 | 33 |
electrically signaling cell | 6.80e-15 | 33 |
electrically responsive cell | 3.61e-11 | 39 |
electrically active cell | 3.61e-11 | 39 |
embryonic cell | 1.89e-08 | 70 |
neuron of cerebral cortex | 5.99e-07 | 6 |