FFCP PHASE1:Mm9::chr13:54398153..54398169,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:54398153..54398169,+ | |||
|description=CAGE_peak_at_chr13:54398153..54398169,+ | |description=CAGE_peak_at_chr13:54398153..54398169,+ | ||
|id=chr13:54398153..54398169,+ | |id=chr13:54398153..54398169,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.22e-11!23;CL:0000337!2.22e-11!23;CL:0000540!5.00e-09!33;CL:0000047!5.00e-09!33;CL:0000031!5.00e-09!33;CL:0000404!5.00e-09!33;CL:0002319!9.60e-08!43;CL:0000221!1.66e-07!44;CL:0000133!1.66e-07!44;CL:0000393!7.79e-07!39;CL:0000211!7.79e-07!39 | |ontology_enrichment_celltype=CL:0000117!2.22e-11!23;CL:0000337!2.22e-11!23;CL:0000540!5.00e-09!33;CL:0000047!5.00e-09!33;CL:0000031!5.00e-09!33;CL:0000404!5.00e-09!33;CL:0002319!9.60e-08!43;CL:0000221!1.66e-07!44;CL:0000133!1.66e-07!44;CL:0000393!7.79e-07!39;CL:0000211!7.79e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.78e-16,23;CL:0000337,3.78e-16,23;CL:0000540,7.26e-10,33;CL:0000047,7.26e-10,33;CL:0000031,7.26e-10,33;CL:0000404,7.26e-10,33;CL:0000393,3.04e-07,39;CL:0000211,3.04e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.61e-25!71;UBERON:0003075!3.61e-25!71;UBERON:0007284!3.61e-25!71;UBERON:0001017!4.16e-23!73;UBERON:0005743!4.16e-23!73;UBERON:0000033!1.52e-22!63;UBERON:0001049!1.88e-22!52;UBERON:0005068!1.88e-22!52;UBERON:0006241!1.88e-22!52;UBERON:0007135!1.88e-22!52;UBERON:0000073!1.90e-22!75;UBERON:0001016!1.90e-22!75;UBERON:0000955!1.39e-21!50;UBERON:0006238!1.39e-21!50;UBERON:0003056!4.86e-21!49;UBERON:0002616!5.18e-21!49;UBERON:0004121!8.13e-21!102;UBERON:0000924!8.13e-21!102;UBERON:0006601!8.13e-21!102;UBERON:0002020!1.64e-18!34;UBERON:0003080!9.04e-18!40;UBERON:0002780!3.40e-17!39;UBERON:0001890!3.40e-17!39;UBERON:0006240!3.40e-17!39;UBERON:0002791!6.07e-16!29;UBERON:0003528!6.07e-16!29;UBERON:0001893!6.07e-16!29;UBERON:0000956!1.28e-11!21;UBERON:0001869!1.28e-11!21;UBERON:0000203!1.28e-11!21;UBERON:0002619!1.05e-09!17;UBERON:0000153!1.76e-08!94;UBERON:0007811!4.58e-08!86;UBERON:0000025!8.14e-08!114;UBERON:0002021!8.58e-08!10;UBERON:0000411!8.58e-08!10;UBERON:0001950!8.58e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.25e-31,64;UBERON:0003075,1.25e-31,64;UBERON:0007284,1.25e-31,64;UBERON:0000073,5.91e-31,54;UBERON:0001049,5.50e-29,52;UBERON:0005068,5.50e-29,52;UBERON:0006241,5.50e-29,52;UBERON:0007135,5.50e-29,52;UBERON:0010371,1.81e-26,73;UBERON:0002020,4.11e-26,34;UBERON:0001017,1.05e-25,73;UBERON:0003056,1.61e-25,49;UBERON:0000955,5.58e-25,47;UBERON:0006238,5.58e-25,47;UBERON:0001016,1.65e-24,75;UBERON:0002616,3.81e-24,46;UBERON:0004121,8.94e-24,95;UBERON:0000924,8.94e-24,95;UBERON:0006601,8.94e-24,95;UBERON:0003528,3.81e-22,29;UBERON:0002791,3.81e-22,29;UBERON:0001893,3.81e-22,29;UBERON:0003080,4.81e-22,40;UBERON:0010314,8.79e-22,92;UBERON:0002780,3.45e-21,39;UBERON:0001890,3.45e-21,39;UBERON:0006240,3.45e-21,39;UBERON:0000956,1.69e-15,21;UBERON:0001869,1.69e-15,21;UBERON:0000203,1.69e-15,21;UBERON:0002619,1.48e-12,17;UBERON:0002021,3.29e-11,10;UBERON:0000411,3.29e-11,10;UBERON:0001950,3.29e-11,10;UBERON:0000025,3.45e-09,114;UBERON:0002420,8.32e-08,8;UBERON:0007245,8.32e-08,8;UBERON:0010009,8.32e-08,8;UBERON:0010011,8.32e-08,8;UBERON:0000454,8.32e-08,8;UBERON:0004111,1.34e-07,122;UBERON:0003076,2.36e-07,12;UBERON:0003057,2.36e-07,12 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0.548457734422955,1.69755860719212,3.48677489619386,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.734187008646726,0,0.872100625521786,0.878744730937887,0.58328969722285,0.979904951377538,2.87505128729943,0.167782606057736,0,0,0.257259436035947,0,0,2.22548106945558,2.64495489636016,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,2.17748185847803,4.05017814995072,2.10324961351382,5.71301968807607,2.20868540951614,2.32732518508413,2.58782771749238,2.75765635983006,4.40463523997555,7.15049093277051,5.52983519722476,1.97829431595291,3.84248103130121,3.64639359389732,9.77140496504833,3.37657566019008,7.18151764551008,3.53554302568401,6.12198227436143,2.42319279572891,0.605809546665472,0.302286240427142,1.15945795480671,0.860423876981386,0,0,0,0,0.842666520790511,0.511290967734173,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0.505524445014783,1.02765491747154,0.258937883647172,1.92974780784272,0.693941307064543,0.304465478312141,1.15307748628029,0.753613202763113,1.76383060703557,0.376999773989026,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0.484875253135222,0,22.8369021669007,19.2690970268379,0,0.11981512450592,0.599902730993408,0,5.09288173976397,12.8100168789215,5.52879149296603,12.5153510538439,12.7857728665165,6.2336413367868,10.2211995732687,1.73126918545538,0.497627882440372,0,0.631325567659422,1.04096354370163,0.919608417733892,2.52086981727489,4.06903008156431,8.09634339900802,8.19927809823039,10.7756983243688,1.29351685369508,0.646703978798527,0.945530400839096,0.703804496655795,0.876782929710299,1.11218899690239,0.696504333044333,0.823128545631774,1.39323986772945,0,0,0,0,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,0.617068451549513,1.39520366850245,1.60964040839772,1.28441876603886,0.16455984991348,0.656669856316381,0.486412857275134,0.438599962275997,0.219550115291051,0.134206418760372,21.449574753541,6.07137213037778,0,0,0.426576501070468,0.696710015581316,0.77320476793256,1.61346819698674,0.22237804384487,0.760902504450237,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.779856348476481,0,0.216138049874694,0.597423819763102,0.189667900953082,0.685491075658373,0,0.203651327845314,1.35766741017338,0.911765658574141,1.20149420536089,1.03327103585722,0.941992367048249,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0.25462585178142,0,0.324270453550071,0.823684239564244,0,0,0,0.252578877947112,0.358794827043824,0,0.554259570499814,0.947457058852424,0.651859905768103,1.35796068620151,2.11221223459652,0.167506257441816,0.476087281772027,0.975668239288994,1.10344600874334,0.221464689648775,0.797273843287435,0.655453258862952,0.345369963731791,0.433947175744535,0,0.54390568381871,0,0,4.65596710964597,4.68846746368813,0.327869890753351,0.252470927204373,0.315508219416257,0.390438744296638,1.29254038639679,0.716906393857656,0.445597348164788,0.566153061577665,0.809621403349789,0.876767573733936,0,4.4984984299053,0.425820255624806,0.534196811001766,0.81443479676788,0.989820737835213,0,0.728341908464944,0.604647113929502,0.754420319023592,0.885905678642318,0.922305443831782,0.516856586336442,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,2.06271086496374,4.76615448055303,0.900305470156551,0.776152102696527,0.643011105094777,1.77340233642274,2.14042581122485,0.658196082408484,0.304464949114599,0.23467170806371,0,0.441056796109924,0.32977250588296,1.29171541356724,0.180938774784468,0.477489376012546,0.164140899745061,0.291480836629851,3.15223013417866,0,1.23832120777933,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,1.35982743995084,0.69975726161829,0.690999869022119,0,1.42351197111511,1.01659733563424,0.432021363287205,0,0.436725127492355,0.674321731924103,0.661227645802687,0.523511883968059,0.518459893167171,0,0,0.747582730219894,0.66183396182839,0.583353565032143,0.774958940866387,0.844780627453891,1.5256441023948,0.911430693907651,0.314578033277133,0.241584120826006,0,0,0,0.616265742988964,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0.579568782096571,0.563047426353546,0.73260649706906,0.428736758158132,0,10.1655331671072,5.06357760157895,9.16632821503035,9.79563139359019,13.7016503954128,9.82012066606611,15.5255175053315,16.6618845192962,12.6879874515577,10.3552062350364,0.93408612825759,0,1.19513524027894,0.243106717068294,1.04806581313991,1.65459157605013,0.44449345560323,1.03017528619447,0.64183841918363,1.01078884705519,1.2673964994512,0.754505365544305,1.12369808963859,1.15245274328765,0.516919220600519,0.952587382566147,1.15884325944855,0.77163688185482,2.88460130562315,1.03039244094078,0.685738504770831,0.532427418478012,1.90748951957857,0.872078499793971,1.03520318456864,1.18460451048347,0.548783918618318,1.57841826862706,0.950628796921032,1.12228454331548,1.30498519936592,1.0835493061312,0.818462086339379,1.08455788830176,1.15743966588685,1.24905288968973,0.701794825336225,1.71896843238639,0.765153328275374,0.441182838239031,0.463735671240843 | |phase1_expression=0.960893082628764,0.348975407639361,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0.548457734422955,1.69755860719212,3.48677489619386,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.734187008646726,0,0.872100625521786,0.878744730937887,0.58328969722285,0.979904951377538,2.87505128729943,0.167782606057736,0,0,0.257259436035947,0,0,2.22548106945558,2.64495489636016,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,2.17748185847803,4.05017814995072,2.10324961351382,5.71301968807607,2.20868540951614,2.32732518508413,2.58782771749238,2.75765635983006,4.40463523997555,7.15049093277051,5.52983519722476,1.97829431595291,3.84248103130121,3.64639359389732,9.77140496504833,3.37657566019008,7.18151764551008,3.53554302568401,6.12198227436143,2.42319279572891,0.605809546665472,0.302286240427142,1.15945795480671,0.860423876981386,0,0,0,0,0.842666520790511,0.511290967734173,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0.505524445014783,1.02765491747154,0.258937883647172,1.92974780784272,0.693941307064543,0.304465478312141,1.15307748628029,0.753613202763113,1.76383060703557,0.376999773989026,0,0.289198713839823,0,0.485300549842228,0.441683036920787,0.484875253135222,0,22.8369021669007,19.2690970268379,0,0.11981512450592,0.599902730993408,0,5.09288173976397,12.8100168789215,5.52879149296603,12.5153510538439,12.7857728665165,6.2336413367868,10.2211995732687,1.73126918545538,0.497627882440372,0,0.631325567659422,1.04096354370163,0.919608417733892,2.52086981727489,4.06903008156431,8.09634339900802,8.19927809823039,10.7756983243688,1.29351685369508,0.646703978798527,0.945530400839096,0.703804496655795,0.876782929710299,1.11218899690239,0.696504333044333,0.823128545631774,1.39323986772945,0,0,0,0,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,0.617068451549513,1.39520366850245,1.60964040839772,1.28441876603886,0.16455984991348,0.656669856316381,0.486412857275134,0.438599962275997,0.219550115291051,0.134206418760372,21.449574753541,6.07137213037778,0,0,0.426576501070468,0.696710015581316,0.77320476793256,1.61346819698674,0.22237804384487,0.760902504450237,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.779856348476481,0,0.216138049874694,0.597423819763102,0.189667900953082,0.685491075658373,0,0.203651327845314,1.35766741017338,0.911765658574141,1.20149420536089,1.03327103585722,0.941992367048249,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0.25462585178142,0,0.324270453550071,0.823684239564244,0,0,0,0.252578877947112,0.358794827043824,0,0.554259570499814,0.947457058852424,0.651859905768103,1.35796068620151,2.11221223459652,0.167506257441816,0.476087281772027,0.975668239288994,1.10344600874334,0.221464689648775,0.797273843287435,0.655453258862952,0.345369963731791,0.433947175744535,0,0.54390568381871,0,0,4.65596710964597,4.68846746368813,0.327869890753351,0.252470927204373,0.315508219416257,0.390438744296638,1.29254038639679,0.716906393857656,0.445597348164788,0.566153061577665,0.809621403349789,0.876767573733936,0,4.4984984299053,0.425820255624806,0.534196811001766,0.81443479676788,0.989820737835213,0,0.728341908464944,0.604647113929502,0.754420319023592,0.885905678642318,0.922305443831782,0.516856586336442,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,2.06271086496374,4.76615448055303,0.900305470156551,0.776152102696527,0.643011105094777,1.77340233642274,2.14042581122485,0.658196082408484,0.304464949114599,0.23467170806371,0,0.441056796109924,0.32977250588296,1.29171541356724,0.180938774784468,0.477489376012546,0.164140899745061,0.291480836629851,3.15223013417866,0,1.23832120777933,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,1.35982743995084,0.69975726161829,0.690999869022119,0,1.42351197111511,1.01659733563424,0.432021363287205,0,0.436725127492355,0.674321731924103,0.661227645802687,0.523511883968059,0.518459893167171,0,0,0.747582730219894,0.66183396182839,0.583353565032143,0.774958940866387,0.844780627453891,1.5256441023948,0.911430693907651,0.314578033277133,0.241584120826006,0,0,0,0.616265742988964,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0.579568782096571,0.563047426353546,0.73260649706906,0.428736758158132,0,10.1655331671072,5.06357760157895,9.16632821503035,9.79563139359019,13.7016503954128,9.82012066606611,15.5255175053315,16.6618845192962,12.6879874515577,10.3552062350364,0.93408612825759,0,1.19513524027894,0.243106717068294,1.04806581313991,1.65459157605013,0.44449345560323,1.03017528619447,0.64183841918363,1.01078884705519,1.2673964994512,0.754505365544305,1.12369808963859,1.15245274328765,0.516919220600519,0.952587382566147,1.15884325944855,0.77163688185482,2.88460130562315,1.03039244094078,0.685738504770831,0.532427418478012,1.90748951957857,0.872078499793971,1.03520318456864,1.18460451048347,0.548783918618318,1.57841826862706,0.950628796921032,1.12228454331548,1.30498519936592,1.0835493061312,0.818462086339379,1.08455788830176,1.15743966588685,1.24905288968973,0.701794825336225,1.71896843238639,0.765153328275374,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr13:54398153..54398169,+ | |short_description=p@chr13:54398153..54398169,+ | ||
}} | }} |
Latest revision as of 03:01, 6 August 2015
Short description: | p@chr13:54398153..54398169, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54398153..54398169, + |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.78e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.78e-16 | 23 |
neuron | 7.26e-10 | 33 |
neuronal stem cell | 7.26e-10 | 33 |
neuroblast | 7.26e-10 | 33 |
electrically signaling cell | 7.26e-10 | 33 |
electrically responsive cell | 3.04e-07 | 39 |
electrically active cell | 3.04e-07 | 39 |