FFCP PHASE1:Hg19::chr5:146889532..146889549,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |EntrezGene=1809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |HGNC=3015 | ||
|TSSclassifier=strong | |||
|UniProt=B3SXQ8,Q14195,Q6DEN2 | |UniProt=B3SXQ8,Q14195,Q6DEN2 | ||
|association_with_transcript=69bp_to_ENST00000343218,NM_001197294_5end | |association_with_transcript=69bp_to_ENST00000343218,NM_001197294_5end | ||
|cluster_id=chr5:146889532..146889549,- | |||
|coexpression_cluster_id=C1527 | |||
|description=CAGE_peak_6_at_DPYSL3_5end | |description=CAGE_peak_6_at_DPYSL3_5end | ||
|id=chr5:146889532..146889549,- | |id=chr5:146889532..146889549,- | ||
|ontology_enrichment_celltype=CL:0000055!6.97e-31!180;CL:0000393!4.16e-14!60;CL:0000211!4.16e-14!60;CL:0002321!3.55e-13!248;CL:0000222!5.39e-13!119;CL:0000192!6.27e-13!42;CL:0000514!6.27e-13!42;CL:0000220!1.72e-12!246;CL:0000359!5.31e-12!32;CL:0000183!5.99e-12!59;CL:0000187!1.39e-11!54;CL:0000133!2.33e-11!59;CL:0002319!2.76e-11!25;CL:0000057!4.93e-11!75;CL:0000680!2.80e-10!57;CL:0000056!2.80e-10!57;CL:0000355!2.80e-10!57;CL:0000333!1.46e-08!41;CL:0000095!2.81e-08!17;CL:0000123!2.81e-08!17;CL:0000221!4.12e-08!71;CL:0000243!4.97e-08!15;CL:0000125!4.97e-08!15;CL:0000030!4.97e-08!15;CL:0000339!4.97e-08!15 | |ontology_enrichment_celltype=CL:0000055!6.97e-31!180;CL:0000393!4.16e-14!60;CL:0000211!4.16e-14!60;CL:0002321!3.55e-13!248;CL:0000222!5.39e-13!119;CL:0000192!6.27e-13!42;CL:0000514!6.27e-13!42;CL:0000220!1.72e-12!246;CL:0000359!5.31e-12!32;CL:0000183!5.99e-12!59;CL:0000187!1.39e-11!54;CL:0000133!2.33e-11!59;CL:0002319!2.76e-11!25;CL:0000057!4.93e-11!75;CL:0000680!2.80e-10!57;CL:0000056!2.80e-10!57;CL:0000355!2.80e-10!57;CL:0000333!1.46e-08!41;CL:0000095!2.81e-08!17;CL:0000123!2.81e-08!17;CL:0000221!4.12e-08!71;CL:0000243!4.97e-08!15;CL:0000125!4.97e-08!15;CL:0000030!4.97e-08!15;CL:0000339!4.97e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.84e-12;25!CL:0000359;3.12e-12;32!CL:0000192;1.15e-09;43!CL:0000095;7.34e-09;17!CL:0000243;2.12e-08;15!CL:0000125;2.12e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.39e-13,32;CL:0000393,3.83e-13,61;CL:0000211,3.83e-13,61;CL:0000192,4.60e-13,43;CL:0000514,4.60e-13,43;CL:0002319,1.18e-12,25;CL:0000133,1.02e-11,59;CL:0000187,2.34e-10,55;CL:0002321,4.98e-10,250;CL:0000222,1.96e-09,121;CL:0000333,2.98e-09,41;CL:0000057,3.13e-09,76;CL:0000680,4.16e-09,58;CL:0000056,4.16e-09,58;CL:0000355,4.16e-09,58;CL:0000095,4.94e-09,17;CL:0000123,4.94e-09,17;CL:0000243,1.04e-08,15;CL:0000125,1.04e-08,15;CL:0000030,1.04e-08,15;CL:0000339,1.04e-08,15;CL:0000221,1.44e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;1.15e-09;43!CL:0000339;2.12e-08;15!CL:0000133;7.25e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.78e-21!84;UBERON:0001981!1.36e-20!60;UBERON:0007500!1.36e-20!60;UBERON:0004537!1.36e-20!60;UBERON:0006965!1.36e-20!60;UBERON:0002049!1.02e-19!79;UBERON:0007798!1.02e-19!79;UBERON:0000119!7.71e-19!312;UBERON:0000483!1.09e-18!309;UBERON:0000468!2.06e-18!659;UBERON:0000055!3.23e-17!69;UBERON:0003914!1.05e-16!118;UBERON:0001637!3.42e-16!42;UBERON:0003509!3.42e-16!42;UBERON:0004572!3.42e-16!42;UBERON:0000922!8.44e-16!612;UBERON:0000481!1.62e-15!347;UBERON:0000477!1.68e-15!286;UBERON:0004111!3.37e-15!241;UBERON:0000475!6.76e-15!365;UBERON:0000025!7.34e-15!194;UBERON:0004535!1.16e-14!110;UBERON:0000467!1.82e-14!625;UBERON:0000480!3.16e-14!626;UBERON:0001009!8.37e-14!113;UBERON:0002050!3.62e-13!605;UBERON:0005423!3.62e-13!605;UBERON:0004573!5.02e-13!33;UBERON:0004571!5.02e-13!33;UBERON:0005256!7.48e-13!143;UBERON:0000923!9.35e-13!604;UBERON:0005291!9.35e-13!604;UBERON:0006598!9.35e-13!604;UBERON:0002532!9.35e-13!604;UBERON:0000914!3.62e-12!83;UBERON:0002329!3.62e-12!83;UBERON:0003077!3.62e-12!83;UBERON:0003059!3.62e-12!83;UBERON:0007282!3.62e-12!83;UBERON:0009618!3.62e-12!83;UBERON:0007285!3.62e-12!83;UBERON:0004290!4.24e-12!70;UBERON:0002385!1.22e-11!63;UBERON:0001015!1.22e-11!63;UBERON:0000383!1.22e-11!63;UBERON:0001134!4.24e-11!61;UBERON:0002036!4.24e-11!61;UBERON:0003082!4.24e-11!61;UBERON:0000490!4.83e-11!138;UBERON:0004121!1.90e-09!169;UBERON:0000486!2.38e-09!82;UBERON:0000924!6.31e-09!173;UBERON:0006601!6.31e-09!173;UBERON:0000947!9.77e-09!21;UBERON:0010191!9.77e-09!21;UBERON:0002100!1.23e-08!216;UBERON:0003104!9.29e-08!238;UBERON:0009142!9.29e-08!238;UBERON:0000064!3.96e-07!219;UBERON:0003103!8.94e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.03e-12;42!UBERON:0003509;1.03e-12;42!UBERON:0004572;1.03e-12;42!UBERON:0004573;1.52e-12;33!UBERON:0004571;1.52e-12;33!UBERON:0007500;1.62e-10;56!UBERON:0001981;1.62e-10;56!UBERON:0004537;1.62e-10;56!UBERON:0000947;9.17e-09;21!UBERON:0010191;9.17e-09;21!UBERON:0003914;1.94e-08;74!UBERON:0000055;2.55e-07;65!UBERON:0002049;8.11e-07;75!UBERON:0007798;8.11e-07;75 | |||
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| ||
|short_description=p6@DPYSL3 | |short_description=p6@DPYSL3 | ||
}} | }} |
Latest revision as of 22:16, 15 September 2015
Short description: | p6@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DPYSL3_5end |
Coexpression cluster: | C1527_glioblastoma_Lens_mesothelioma_mesenchymal_granulosa_Ciliary_Smooth |
Association with transcript: | 69bp_to_ENST00000343218, NM_001197294_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | B3SXQ8Q14195Q6DEN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.39e-13 | 32 |
electrically responsive cell | 3.83e-13 | 61 |
electrically active cell | 3.83e-13 | 61 |
smooth muscle cell | 4.60e-13 | 43 |
smooth muscle myoblast | 4.60e-13 | 43 |
neural cell | 1.18e-12 | 25 |
neurectodermal cell | 1.02e-11 | 59 |
muscle cell | 2.34e-10 | 55 |
embryonic cell | 4.98e-10 | 250 |
mesodermal cell | 1.96e-09 | 121 |
migratory neural crest cell | 2.98e-09 | 41 |
fibroblast | 3.13e-09 | 76 |
muscle precursor cell | 4.16e-09 | 58 |
myoblast | 4.16e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.16e-09 | 58 |
neuron associated cell | 4.94e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 4.94e-09 | 17 |
glial cell (sensu Vertebrata) | 1.04e-08 | 15 |
glial cell | 1.04e-08 | 15 |
glioblast | 1.04e-08 | 15 |
glioblast (sensu Vertebrata) | 1.04e-08 | 15 |
ectodermal cell | 1.44e-07 | 72 |