FFCP PHASE1:Hg19::chr4:15004067..15004113,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:15004067..15004113,+
|short_description=p1@CPEB2
|description=CAGE_peak_1_at_CPEB2_5end
|association_with_transcript=-184bp_to_ENST00000442003,ENST00000538...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=132864 | |EntrezGene=132864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21745 | |HGNC=21745 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPM3,F5H160,F5H659,Q7Z5Q1 | |UniProt=E7EPM3,F5H160,F5H659,Q7Z5Q1 | ||
|association_with_transcript=-184bp_to_ENST00000442003,ENST00000538197,ENST00000541112,NM_001177381,NM_001177382,NM_001177383,NM_001177384,NM_182485,NM_182646_5end | |||
|cluster_id=chr4:15004067..15004113,+ | |||
|coexpression_cluster_id=C1808 | |||
|description=CAGE_peak_1_at_CPEB2_5end | |||
|id=chr4:15004067..15004113,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.30e-24!42;CL:0000860!9.34e-23!45;CL:0000738!1.66e-21!140;CL:0000766!1.92e-21!76;CL:0000557!2.52e-18!71;CL:0002009!8.04e-18!65;CL:0002194!8.33e-17!63;CL:0000576!8.33e-17!63;CL:0000040!8.33e-17!63;CL:0000559!8.33e-17!63;CL:0000839!4.82e-16!70;CL:0002087!1.03e-15!119;CL:0002031!1.60e-15!124;CL:0000037!4.97e-11!172;CL:0000566!4.97e-11!172;CL:0002032!1.67e-09!165;CL:0000837!1.67e-09!165;CL:0000988!2.47e-09!182;CL:0000763!9.49e-09!112;CL:0000049!9.49e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-18;33!CL:0002057;1.11e-18;33!CL:0000576;5.45e-15;48!CL:0000473;8.53e-14;39!CL:0000234;8.53e-14;39!CL:0000766;5.66e-12;69!CL:0002087;7.81e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.45e-24,42;CL:0002057,2.45e-24,42;CL:0000766,2.08e-22,72;CL:0000473,1.51e-21,48;CL:0000234,1.51e-21,48;CL:0000738,1.70e-21,136;CL:0000557,3.51e-19,67;CL:0002009,1.02e-18,61;CL:0002194,1.15e-17,59;CL:0000576,1.15e-17,59;CL:0000040,1.15e-17,59;CL:0000559,1.15e-17,59;CL:0000839,7.54e-17,66;CL:0002087,1.22e-15,115;CL:0002031,1.70e-15,120;CL:0000037,3.33e-11,168;CL:0002032,1.20e-09,161;CL:0000837,1.20e-09,161;CL:0000988,1.50e-09,177;CL:0000763,2.66e-09,108;CL:0000049,2.66e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.96e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.06e-19!102;UBERON:0003061!8.06e-19!102;UBERON:0002371!1.84e-18!80;UBERON:0002193!8.79e-18!112;UBERON:0001474!2.81e-17!86;UBERON:0001049!1.29e-16!57;UBERON:0005068!1.29e-16!57;UBERON:0006241!1.29e-16!57;UBERON:0007135!1.29e-16!57;UBERON:0002616!2.03e-15!59;UBERON:0007023!7.16e-15!115;UBERON:0004765!9.85e-15!101;UBERON:0001434!9.85e-15!101;UBERON:0003080!2.15e-13!42;UBERON:0002780!3.96e-13!41;UBERON:0001890!3.96e-13!41;UBERON:0006240!3.96e-13!41;UBERON:0000955!2.72e-12!69;UBERON:0006238!2.72e-12!69;UBERON:0001017!2.76e-12!82;UBERON:0002405!6.74e-12!115;UBERON:0000073!7.54e-12!94;UBERON:0001016!7.54e-12!94;UBERON:0005743!1.25e-11!86;UBERON:0002020!3.05e-11!34;UBERON:0003528!3.05e-11!34;UBERON:0001893!4.06e-11!34;UBERON:0002791!8.16e-11!33;UBERON:0002346!3.43e-10!90;UBERON:0001869!4.20e-10!32;UBERON:0003075!6.27e-09!86;UBERON:0007284!6.27e-09!86;UBERON:0002619!5.28e-08!22;UBERON:0002204!1.65e-07!167;UBERON:0000956!2.87e-07!25;UBERON:0000203!2.87e-07!25;UBERON:0001950!2.93e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.63e-10;41!UBERON:0001890;4.63e-10;41!UBERON:0001893;6.59e-10;34!UBERON:0003528;7.02e-10;34!UBERON:0002020;7.02e-10;34!UBERON:0002791;1.22e-09;32!UBERON:0000073;1.83e-09;53!UBERON:0002616;1.83e-09;53!UBERON:0001869;2.38e-09;32!UBERON:0002619;2.98e-08;22!UBERON:0000956;1.69e-07;25!UBERON:0000203;1.69e-07;25!UBERON:0001950;1.78e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.86e-19,98;UBERON:0003061,1.86e-19,98;UBERON:0002371,3.69e-19,76;UBERON:0002193,4.03e-18,108;UBERON:0001474,5.94e-18,82;UBERON:0002405,1.14e-16,93;UBERON:0001049,2.26e-16,56;UBERON:0005068,2.26e-16,56;UBERON:0006241,2.26e-16,56;UBERON:0007135,2.26e-16,56;UBERON:0004765,2.46e-16,90;UBERON:0001434,1.74e-15,100;UBERON:0000073,3.07e-15,53;UBERON:0002616,3.07e-15,53;UBERON:0007023,1.08e-14,114;UBERON:0002780,2.97e-13,41;UBERON:0001890,2.97e-13,41;UBERON:0003080,2.97e-13,41;UBERON:0006240,2.97e-13,41;UBERON:0001016,4.00e-12,89;UBERON:0000955,5.52e-12,68;UBERON:0006238,5.52e-12,68;UBERON:0001017,6.14e-12,81;UBERON:0002346,1.39e-11,86;UBERON:0003528,2.40e-11,34;UBERON:0002020,2.40e-11,34;UBERON:0001893,3.20e-11,34;UBERON:0002791,1.90e-10,32;UBERON:0003075,3.16e-10,82;UBERON:0007284,3.16e-10,82;UBERON:0001869,3.39e-10,32;UBERON:0002204,4.47e-08,167;UBERON:0002619,4.50e-08,22;UBERON:0000956,2.49e-07,25;UBERON:0000203,2.49e-07,25;UBERON:0001950,2.54e-07,20;UBERON:0003081,2.84e-07,203;UBERON:0003056,5.07e-07,61;UBERON:0010371,6.24e-07,104 | |||
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| ||
|short_description=p1@CPEB2 | |||
}} | }} |
Latest revision as of 00:54, 16 September 2015
Short description: | p1@CPEB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPEB2_5end |
Coexpression cluster: | C1808_thalamus_substantia_Eosinophils_globus_CD14_optic_Neutrophils |
Association with transcript: | -184bp_to_ENST00000442003, ENST00000538197, ENST00000541112, NM_001177381, NM_001177382, NM_001177383, NM_001177384, NM_182485, NM_182646_5end |
EntrezGene: | CPEB2 |
HGNC: | 21745 |
UniProt: | E7EPM3F5H160F5H659Q7Z5Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.45e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-24 | 42 |
myeloid leukocyte | 2.08e-22 | 72 |
defensive cell | 1.51e-21 | 48 |
phagocyte | 1.51e-21 | 48 |
leukocyte | 1.70e-21 | 136 |
granulocyte monocyte progenitor cell | 3.51e-19 | 67 |
macrophage dendritic cell progenitor | 1.02e-18 | 61 |
monopoietic cell | 1.15e-17 | 59 |
monocyte | 1.15e-17 | 59 |
monoblast | 1.15e-17 | 59 |
promonocyte | 1.15e-17 | 59 |
myeloid lineage restricted progenitor cell | 7.54e-17 | 66 |
nongranular leukocyte | 1.22e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.70e-15 | 120 |
hematopoietic stem cell | 3.33e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.20e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-09 | 161 |
hematopoietic cell | 1.50e-09 | 177 |
myeloid cell | 2.66e-09 | 108 |
common myeloid progenitor | 2.66e-09 | 108 |