FFCP PHASE1:Hg19::chr2:102759199..102759265,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:102759199..102759265,+ to FFCP PHASE1:Hg19::chr2:102759199..102759265,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3554 | |EntrezGene=3554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5993 | |HGNC=5993 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZ73,P14778 | |UniProt=B8ZZ73,P14778 | ||
|association_with_transcript=0bp_to_ENST00000409288,ENST00000410023,uc002tbp.2,uc002tbq.2_5end | |||
|cluster_id=chr2:102759199..102759265,+ | |||
|description=CAGE_peak_1_at_IL1R1_5end | |||
|id=chr2:102759199..102759265,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.13e-14!180;CL:0000057!6.10e-14!75;CL:0000048!3.03e-10!430;CL:0000723!2.23e-09!436;CL:0000680!7.45e-09!57;CL:0000056!7.45e-09!57;CL:0000355!7.45e-09!57;CL:0000187!1.71e-08!54;CL:0000183!2.93e-08!59;CL:0000136!4.22e-08!15;CL:0000034!5.20e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.79e-09;33!CL:0002057;2.79e-09;33!CL:0000136;1.40e-07;13!CL:0000473;8.43e-07;39!CL:0000234;8.43e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.70e-14,76;CL:0000048,2.44e-12,427;CL:0000723,1.96e-11,433;CL:0000034,8.84e-10,441;CL:0000680,2.05e-09,58;CL:0000056,2.05e-09,58;CL:0000355,2.05e-09,58;CL:0000187,4.78e-09,55;CL:0000136,3.43e-08,15;CL:0002320,2.24e-07,361;CL:0000393,5.43e-07,61;CL:0000211,5.43e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.81e-19!659;UBERON:0000467!5.90e-18!625;UBERON:0000480!1.37e-17!626;UBERON:0000926!4.80e-17!448;UBERON:0004120!4.80e-17!448;UBERON:0006603!4.80e-17!448;UBERON:0002204!6.49e-15!167;UBERON:0000062!1.01e-14!511;UBERON:0005256!1.67e-13!143;UBERON:0000914!2.19e-13!83;UBERON:0002329!2.19e-13!83;UBERON:0003077!2.19e-13!83;UBERON:0003059!2.19e-13!83;UBERON:0007282!2.19e-13!83;UBERON:0009618!2.19e-13!83;UBERON:0007285!2.19e-13!83;UBERON:0002050!7.38e-13!605;UBERON:0005423!7.38e-13!605;UBERON:0000923!1.22e-12!604;UBERON:0005291!1.22e-12!604;UBERON:0006598!1.22e-12!604;UBERON:0002532!1.22e-12!604;UBERON:0000922!4.21e-12!612;UBERON:0004290!2.29e-11!70;UBERON:0002100!2.72e-11!216;UBERON:0000486!9.38e-10!82;UBERON:0000479!1.21e-09!787;UBERON:0002385!2.25e-09!63;UBERON:0001015!2.25e-09!63;UBERON:0000383!2.25e-09!63;UBERON:0001134!3.26e-09!61;UBERON:0002036!3.26e-09!61;UBERON:0003082!3.26e-09!61;UBERON:0000475!6.84e-09!365;UBERON:0007100!1.05e-08!27;UBERON:0000481!3.47e-08!347;UBERON:0000948!3.50e-08!24;UBERON:0005498!3.50e-08!24;UBERON:0004140!3.50e-08!24;UBERON:0009881!3.50e-08!24;UBERON:0004141!3.50e-08!24;UBERON:0003084!3.50e-08!24;UBERON:0007005!3.50e-08!24;UBERON:0004139!3.50e-08!24;UBERON:0004291!3.50e-08!24;UBERON:0003081!1.11e-07!216;UBERON:0004872!1.52e-07!84;UBERON:0003914!4.31e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.17e-08;25!UBERON:0000948;1.82e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.08e-19,315;UBERON:0004120,2.08e-19,315;UBERON:0006603,2.08e-19,315;UBERON:0002204,3.36e-17,167;UBERON:0005256,8.45e-13,122;UBERON:0002050,4.66e-12,564;UBERON:0002329,5.57e-12,71;UBERON:0003059,5.57e-12,71;UBERON:0007282,5.57e-12,71;UBERON:0004290,5.57e-12,71;UBERON:0009618,5.57e-12,71;UBERON:0000923,7.93e-12,560;UBERON:0010316,7.93e-12,560;UBERON:0005291,7.93e-12,560;UBERON:0006598,7.93e-12,560;UBERON:0010317,7.93e-12,560;UBERON:0002532,7.93e-12,560;UBERON:0003104,1.17e-11,160;UBERON:0009142,1.17e-11,160;UBERON:0003077,1.43e-11,72;UBERON:0007285,1.43e-11,72;UBERON:0007524,1.60e-11,73;UBERON:0007503,2.79e-11,78;UBERON:0005423,6.89e-11,581;UBERON:0000479,7.47e-11,773;UBERON:0000486,2.37e-10,83;UBERON:0002385,6.13e-10,64;UBERON:0001015,6.13e-10,64;UBERON:0000383,6.13e-10,64;UBERON:0001134,8.91e-10,62;UBERON:0002036,8.91e-10,62;UBERON:0003082,8.91e-10,62;UBERON:0000922,1.70e-09,592;UBERON:0002100,4.36e-09,199;UBERON:0007100,8.33e-09,27;UBERON:0003081,1.68e-08,203;UBERON:0000948,2.84e-08,24;UBERON:0005498,2.84e-08,24;UBERON:0004140,2.84e-08,24;UBERON:0009881,2.84e-08,24;UBERON:0004141,2.84e-08,24;UBERON:0003084,2.84e-08,24;UBERON:0007005,2.84e-08,24;UBERON:0004139,2.84e-08,24;UBERON:0004291,2.84e-08,24;UBERON:0004923,5.87e-08,66;UBERON:0004872,2.32e-07,83;UBERON:0002384,5.11e-07,371;UBERON:0001434,5.78e-07,100;UBERON:0000490,7.82e-07,148 | |||
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| ||
|short_description=p1@IL1R1 | |||
}} | }} |
Latest revision as of 01:37, 16 September 2015
Short description: | p1@IL1R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL1R1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409288, ENST00000410023, uc002tbp.2, uc002tbq.2_5end |
EntrezGene: | IL1R1 |
HGNC: | 5993 |
UniProt: | B8ZZ73P14778 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.70e-14 | 76 |
multi fate stem cell | 2.44e-12 | 427 |
somatic stem cell | 1.96e-11 | 433 |
stem cell | 8.84e-10 | 441 |
muscle precursor cell | 2.05e-09 | 58 |
myoblast | 2.05e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.05e-09 | 58 |
muscle cell | 4.78e-09 | 55 |
fat cell | 3.43e-08 | 15 |
connective tissue cell | 2.24e-07 | 361 |
electrically responsive cell | 5.43e-07 | 61 |
electrically active cell | 5.43e-07 | 61 |