FFCP PHASE1:Hg19::chr12:108523105..108523125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9671 | |EntrezGene=9671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29117 | |HGNC=29117 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-122bp_to_ENST00000547525_5end | |association_with_transcript=-122bp_to_ENST00000547525_5end | ||
|cluster_id=chr12:108523105..108523125,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_5_at_WSCD2_5end | |description=CAGE_peak_5_at_WSCD2_5end | ||
|id=chr12:108523105..108523125,+ | |id=chr12:108523105..108523125,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.66e-10!5;CL:0000457!2.66e-10!5;CL:0002191!2.66e-10!5;CL:0000097!2.66e-10!5;CL:0000831!2.66e-10!5;CL:0002028!2.66e-10!5;CL:0002322!5.41e-08!5 | |ontology_enrichment_celltype=CL:0002274!2.66e-10!5;CL:0000457!2.66e-10!5;CL:0002191!2.66e-10!5;CL:0000097!2.66e-10!5;CL:0000831!2.66e-10!5;CL:0002028!2.66e-10!5;CL:0002322!5.41e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.49e-15;5!CL:0000163;1.47e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.50e-15,5;CL:0002028,6.50e-15,5;CL:0000163,1.61e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.77e-26;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@WSCD2 | |short_description=p5@WSCD2 | ||
}} | }} |
Latest revision as of 04:02, 16 September 2015
Short description: | p5@WSCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WSCD2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -122bp_to_ENST00000547525_5end |
EntrezGene: | WSCD2 |
HGNC: | 29117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.50e-15 | 5 |
basophil mast progenitor cell | 6.50e-15 | 5 |
endocrine cell | 1.61e-08 | 9 |