FFCP PHASE1:Hg19::chr3:16306114..16306133,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285381 | |EntrezGene=285381 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27717 | |HGNC=27717 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000462982_5end | |association_with_transcript=-20bp_to_ENST00000462982_5end | ||
|cluster_id=chr3:16306114..16306133,- | |||
|coexpression_cluster_id=C4300 | |||
|description=CAGE_peak_5_at_DPH3_5end | |description=CAGE_peak_5_at_DPH3_5end | ||
|id=chr3:16306114..16306133,- | |id=chr3:16306114..16306133,- | ||
|ontology_enrichment_celltype=CL:0000738!1.43e-29!140;CL:0000988!3.07e-27!182;CL:0000037!3.18e-27!172;CL:0000566!3.18e-27!172;CL:0000766!6.27e-25!76;CL:0002032!3.01e-24!165;CL:0000837!3.01e-24!165;CL:0002057!3.16e-24!42;CL:0000860!1.85e-23!45;CL:0000763!1.67e-22!112;CL:0000049!1.67e-22!112;CL:0000557!2.93e-22!71;CL:0002031!7.63e-22!124;CL:0000839!6.21e-20!70;CL:0002087!8.60e-20!119;CL:0002009!4.07e-19!65;CL:0002194!1.05e-17!63;CL:0000576!1.05e-17!63;CL:0000040!1.05e-17!63;CL:0000559!1.05e-17!63;CL:0002320!5.66e-14!365;CL:0000134!2.59e-13!358;CL:0000048!2.40e-11!430;CL:0000034!5.81e-11!444;CL:0000723!1.50e-10!436;CL:0000219!2.02e-10!390;CL:0002393!9.51e-09!9;CL:0002397!9.51e-09!9 | |ontology_enrichment_celltype=CL:0000738!1.43e-29!140;CL:0000988!3.07e-27!182;CL:0000037!3.18e-27!172;CL:0000566!3.18e-27!172;CL:0000766!6.27e-25!76;CL:0002032!3.01e-24!165;CL:0000837!3.01e-24!165;CL:0002057!3.16e-24!42;CL:0000860!1.85e-23!45;CL:0000763!1.67e-22!112;CL:0000049!1.67e-22!112;CL:0000557!2.93e-22!71;CL:0002031!7.63e-22!124;CL:0000839!6.21e-20!70;CL:0002087!8.60e-20!119;CL:0002009!4.07e-19!65;CL:0002194!1.05e-17!63;CL:0000576!1.05e-17!63;CL:0000040!1.05e-17!63;CL:0000559!1.05e-17!63;CL:0002320!5.66e-14!365;CL:0000134!2.59e-13!358;CL:0000048!2.40e-11!430;CL:0000034!5.81e-11!444;CL:0000723!1.50e-10!436;CL:0000219!2.02e-10!390;CL:0002393!9.51e-09!9;CL:0002397!9.51e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.63e-20;8!CL:0000081;5.84e-19;11!CL:0000766;7.51e-19;69!CL:0000860;4.43e-17;33!CL:0002057;4.43e-17;33!CL:0000576;1.35e-15;48!CL:0000624;5.79e-14;6!CL:0000097;1.77e-11;5!CL:0000623;2.73e-11;3!CL:0000767;4.11e-11;3!CL:0000791;5.62e-11;18!CL:0000789;5.62e-11;18!CL:0002419;5.62e-11;18!CL:0000473;6.53e-11;39!CL:0000234;6.53e-11;39!CL:0002393;8.17e-10;6!CL:0002397;8.17e-10;6!CL:0002087;2.46e-09;104!CL:0000763;4.77e-09;100!CL:0000738;8.55e-09;136!CL:0000771;2.59e-08;2!CL:0000084;1.64e-07;25!CL:0001014;1.92e-07;2!CL:0001016;1.92e-07;2!CL:0000988;2.21e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.81e-48,136;CL:0000988,1.48e-39,177;CL:0000766,5.30e-39,72;CL:0000037,1.54e-38,168;CL:0002032,3.79e-35,161;CL:0000837,3.79e-35,161;CL:0002031,1.44e-32,120;CL:0000557,6.61e-31,67;CL:0000763,9.21e-29,108;CL:0000049,9.21e-29,108;CL:0002087,2.37e-26,115;CL:0000860,2.40e-26,42;CL:0002057,2.40e-26,42;CL:0000839,1.74e-24,66;CL:0000473,2.12e-22,48;CL:0000234,2.12e-22,48;CL:0002009,4.46e-22,61;CL:0000094,9.28e-21,8;CL:0000081,4.25e-19,11;CL:0002194,9.34e-19,59;CL:0000576,9.34e-19,59;CL:0000040,9.34e-19,59;CL:0000559,9.34e-19,59;CL:0000134,8.04e-14,354;CL:0000624,8.40e-14,6;CL:0002320,2.52e-13,361;CL:0000219,1.41e-11,386;CL:0000097,1.45e-11,5;CL:0002028,1.45e-11,5;CL:0000623,2.02e-11,3;CL:0000825,2.02e-11,3;CL:0000767,3.37e-11,3;CL:0000791,7.13e-11,18;CL:0000789,7.13e-11,18;CL:0002420,7.13e-11,18;CL:0002419,7.13e-11,18;CL:0000790,7.13e-11,18;CL:0000048,3.99e-10,427;CL:0000723,8.05e-10,433;CL:0002393,1.76e-09,9;CL:0002397,1.76e-09,9;CL:0000034,2.00e-09,441;CL:0000771,2.22e-08,2;CL:0001014,1.41e-07,2;CL:0001016,1.41e-07,2;CL:0000084,1.93e-07,25;CL:0000827,1.93e-07,25;CL:0000838,6.84e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;3.32e-19;42!CL:0000790;5.62e-11;18!CL:0000049;1.53e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.92e-21!80;UBERON:0001474!5.59e-20!86;UBERON:0002390!6.46e-20!102;UBERON:0003061!6.46e-20!102;UBERON:0004765!1.78e-17!101;UBERON:0001434!1.78e-17!101;UBERON:0002193!1.93e-17!112;UBERON:0002384!4.43e-13!375;UBERON:0002405!8.47e-13!115;UBERON:0002204!1.46e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.07e-27,98;UBERON:0003061,1.07e-27,98;UBERON:0002371,1.98e-26,76;UBERON:0001474,6.99e-26,82;UBERON:0002193,2.24e-24,108;UBERON:0004765,6.08e-23,90;UBERON:0002405,5.44e-22,93;UBERON:0001434,6.25e-20,100;UBERON:0002384,1.20e-12,371;UBERON:0003081,4.40e-10,203;UBERON:0002204,3.77e-09,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.157421562627358,7.08055698328027,1.53531759238885,4.4896675761662,0,0,0,0.154934401160603,0,0.293600439334847,6.09394949385065,4.8130667392834,5.64228263861215,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0,2.58923153089935,1.7931249457037,2.36482229888585,2.75796544589295,0.645484683583826,1.35426486594342,0,0.272906150057846,0.449446968890169,0.306083892370903,1.92557416245656,1.27867425159808,0.659702600373432,1.19678194572979,1.27867425159808,0.580418477257168,0,0,3.51748131359441,2.60741459210101,3.25783267057675,1.21079900526674,2.20966581592539,1.58231193720442,0.633765858935825,2.76385589954557,0.838634582033504,0.561643155732475,0.750884464207532,0.803627933485401,1.14005097496499,0.99458338599545,0.730656615058536,0,0,0,0,0,0,0,0.954053754535364,0,2.34894875748376,0.764546456250458,0,0.560508562981536,0.263384084775077,3.14735632182133,3.14408610199332,4.72883447698871,0,1.30368906653436,0.473447805734733,0,0,0.294605907474837,0,0.270803863765016,0.25618263945135,0.260118695119756,0.164437904603676,0.276350017785848,0,0.741432815810302,0.535081656179426,0,0.113309342697566,1.14966148080576,1.37450978193052,0,0.318565414324097,0,0,0.451725357233318,0,0,0,0,5.24177532384304,3.4767225451856,3.18613688542158,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.263504357079378,0,0,0,0.324547393654683,0.696518949197069,0,0.715471872916026,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,19.3890132074163,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0,0,0,1.71697232418975,0,0,0,0,0,0.283550194484773,0.179117045405697,0.290633938513962,0,11.8239177095026,0,2.69526550203004,3.60299883542404,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,6.30498432646167,2.80315847317372,3.7219480521127,0,1.30139853857622,0,0.167516265334349,0,1.49801404789436,0,3.72973962092432,0.12269149171914,0.500170521059677,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,1.03384013061444,4.09856981555372,0.960548020230999,0,0,0,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.183138929636687,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0.255679882248303,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0,0,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0.614481528616916,0,1.16794399198336,0.781552381608161,0,0,0,0,0,0.18714054040822,0,0,0,0.568272293612826,0.23874448473769,0,0,0,0.422008249231538,0,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0.174919999992391,0,0,0,0,0,0,0.173624994933292,0,1.68835014075571,0,0,0.295547618953547,0.219385397153973,0.21787692703798,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0.332423363800313,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0,0,0,0,2.07564790076435,0.617819694732514,1.14864144456001,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0.442306057399416,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.329663433524666,0.13480708770837,0,0.169346664131569,0,0.272406812223151,0,0.275078873194468,0,2.69968669861801,1.5476039091159,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.410462603746695,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0.395223263795889,0,0,1.08803560673895,0,0,0.983617892129413,0,2.65820453990096,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0.13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|short_description=p5@DPH3 | |short_description=p5@DPH3 | ||
}} | }} |
Latest revision as of 11:52, 16 September 2015
Short description: | p5@DPH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DPH3_5end |
Coexpression cluster: | C4300_Basophils_Eosinophils_Mast_CD14_CD34_CD4_CD8 |
Association with transcript: | -20bp_to_ENST00000462982_5end |
EntrezGene: | DPH3 |
HGNC: | 27717 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-27 | 98 |
blood island | 1.07e-27 | 98 |
bone marrow | 1.98e-26 | 76 |
bone element | 6.99e-26 | 82 |
hemolymphoid system | 2.24e-24 | 108 |
skeletal element | 6.08e-23 | 90 |
immune system | 5.44e-22 | 93 |
skeletal system | 6.25e-20 | 100 |
connective tissue | 1.20e-12 | 371 |
lateral plate mesoderm | 4.40e-10 | 203 |
musculoskeletal system | 3.77e-09 | 167 |