FFCP PHASE1:Hg19::chr16:31483451..31483507,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:31483451..31483507,+
|short_description=p1@TGFB1I1
|description=CAGE_peak_1_at_TGFB1I1_5end
|association_with_transcript=0bp_to_NM_001042454,uc002ecd.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7041 | |EntrezGene=7041 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11767 | |HGNC=11767 | ||
|TSSclassifier=strong | |||
|UniProt=O43294 | |UniProt=O43294 | ||
|association_with_transcript=0bp_to_NM_001042454,uc002ecd.1_5end | |||
|cluster_id=chr16:31483451..31483507,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_TGFB1I1_5end | |||
|id=chr16:31483451..31483507,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.34e-39!180;CL:0000222!3.68e-24!119;CL:0000183!1.70e-22!59;CL:0000187!6.16e-20!54;CL:0000680!2.15e-19!57;CL:0000056!2.15e-19!57;CL:0000355!2.15e-19!57;CL:0000220!2.88e-19!246;CL:0002321!7.97e-19!248;CL:0000192!7.43e-18!42;CL:0000514!7.43e-18!42;CL:0000393!3.80e-17!60;CL:0000211!3.80e-17!60;CL:0000057!2.34e-16!75;CL:0000359!4.14e-14!32;CL:0002620!2.69e-07!23;CL:0002371!5.78e-07!591;CL:0002078!7.25e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.23e-13;32!CL:0000192;5.70e-13;43!CL:0000187;3.67e-11;55!CL:0000393;2.72e-09;61!CL:0000211;2.72e-09;61!CL:0000057;9.73e-08;73!CL:0002620;2.56e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.62e-25,121;CL:0000187,2.91e-20,55;CL:0000680,1.01e-19,58;CL:0000056,1.01e-19,58;CL:0000355,1.01e-19,58;CL:0002321,1.56e-19,250;CL:0000192,3.79e-18,43;CL:0000514,3.79e-18,43;CL:0000393,1.82e-17,61;CL:0000211,1.82e-17,61;CL:0000057,6.65e-17,76;CL:0000359,3.39e-14,32;CL:0002620,2.45e-07,23;CL:0002078,4.70e-07,45;CL:0000115,7.83e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;5.70e-13;43!CL:0000355;1.27e-10;58!CL:0000222;5.63e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!9.10e-24!143;UBERON:0002049!1.85e-23!79;UBERON:0007798!1.85e-23!79;UBERON:0000914!1.62e-22!83;UBERON:0002329!1.62e-22!83;UBERON:0003077!1.62e-22!83;UBERON:0003059!1.62e-22!83;UBERON:0007282!1.62e-22!83;UBERON:0009618!1.62e-22!83;UBERON:0007285!1.62e-22!83;UBERON:0004872!5.31e-22!84;UBERON:0003914!1.96e-21!118;UBERON:0004290!6.79e-21!70;UBERON:0000486!9.82e-21!82;UBERON:0004535!2.93e-20!110;UBERON:0001009!9.23e-20!113;UBERON:0002385!1.86e-19!63;UBERON:0001015!1.86e-19!63;UBERON:0000383!1.86e-19!63;UBERON:0000055!2.54e-19!69;UBERON:0001981!4.33e-19!60;UBERON:0007500!4.33e-19!60;UBERON:0004537!4.33e-19!60;UBERON:0006965!4.33e-19!60;UBERON:0001134!5.45e-19!61;UBERON:0002036!5.45e-19!61;UBERON:0003082!5.45e-19!61;UBERON:0002100!1.37e-18!216;UBERON:0000490!5.57e-17!138;UBERON:0000475!7.19e-17!365;UBERON:0000119!4.58e-16!312;UBERON:0001637!9.40e-16!42;UBERON:0003509!9.40e-16!42;UBERON:0004572!9.40e-16!42;UBERON:0000468!1.03e-15!659;UBERON:0000481!1.81e-15!347;UBERON:0000483!4.37e-15!309;UBERON:0003104!8.25e-15!238;UBERON:0009142!8.25e-15!238;UBERON:0000477!1.27e-12!286;UBERON:0004573!3.95e-12!33;UBERON:0004571!3.95e-12!33;UBERON:0000467!4.70e-12!625;UBERON:0000480!9.41e-12!626;UBERON:0004111!2.00e-10!241;UBERON:0002050!6.06e-09!605;UBERON:0005423!6.06e-09!605;UBERON:0003102!1.15e-08!95;UBERON:0000923!1.15e-08!604;UBERON:0005291!1.15e-08!604;UBERON:0006598!1.15e-08!604;UBERON:0002532!1.15e-08!604;UBERON:0000922!1.24e-08!612;UBERON:0000926!1.57e-08!448;UBERON:0004120!1.57e-08!448;UBERON:0006603!1.57e-08!448;UBERON:0000025!4.00e-08!194;UBERON:0000947!8.25e-08!21;UBERON:0010191!8.25e-08!21;UBERON:0003103!4.04e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.02e-11;42!UBERON:0003509;2.02e-11;42!UBERON:0004572;2.02e-11;42!UBERON:0004573;3.24e-11;33!UBERON:0004571;3.24e-11;33!UBERON:0007500;8.33e-11;56!UBERON:0001981;8.33e-11;56!UBERON:0004537;8.33e-11;56!UBERON:0003914;7.23e-10;74!UBERON:0000055;2.21e-09;65!UBERON:0002049;2.69e-09;75!UBERON:0007798;2.69e-09;75!UBERON:0000947;7.39e-08;21!UBERON:0010191;7.39e-08;21!UBERON:0002385;3.32e-07;31!UBERON:0001015;3.32e-07;31!UBERON:0000383;3.32e-07;31 | |||
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| ||
|short_description=p1@TGFB1I1 | |||
}} | }} |
Latest revision as of 12:44, 16 September 2015
Short description: | p1@TGFB1I1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TGFB1I1_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_NM_001042454, uc002ecd.1_5end |
EntrezGene: | TGFB1I1 |
HGNC: | 11767 |
UniProt: | O43294 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.62e-25 | 121 |
muscle cell | 2.91e-20 | 55 |
muscle precursor cell | 1.01e-19 | 58 |
myoblast | 1.01e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-19 | 58 |
embryonic cell | 1.56e-19 | 250 |
smooth muscle cell | 3.79e-18 | 43 |
smooth muscle myoblast | 3.79e-18 | 43 |
electrically responsive cell | 1.82e-17 | 61 |
electrically active cell | 1.82e-17 | 61 |
fibroblast | 6.65e-17 | 76 |
vascular associated smooth muscle cell | 3.39e-14 | 32 |
skin fibroblast | 2.45e-07 | 23 |
meso-epithelial cell | 4.70e-07 | 45 |
endothelial cell | 7.83e-07 | 36 |