FFCP PHASE1:Hg19::chr16:31483451..31483507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7041 | |EntrezGene=7041 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11767 | |HGNC=11767 | ||
|TSSclassifier=strong | |||
|UniProt=O43294 | |UniProt=O43294 | ||
|association_with_transcript=0bp_to_NM_001042454,uc002ecd.1_5end | |association_with_transcript=0bp_to_NM_001042454,uc002ecd.1_5end | ||
|cluster_id=chr16:31483451..31483507,+ | |||
|coexpression_cluster_id=C345 | |coexpression_cluster_id=C345 | ||
|description=CAGE_peak_1_at_TGFB1I1_5end | |description=CAGE_peak_1_at_TGFB1I1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.34e-39!180;CL:0000222!3.68e-24!119;CL:0000183!1.70e-22!59;CL:0000187!6.16e-20!54;CL:0000680!2.15e-19!57;CL:0000056!2.15e-19!57;CL:0000355!2.15e-19!57;CL:0000220!2.88e-19!246;CL:0002321!7.97e-19!248;CL:0000192!7.43e-18!42;CL:0000514!7.43e-18!42;CL:0000393!3.80e-17!60;CL:0000211!3.80e-17!60;CL:0000057!2.34e-16!75;CL:0000359!4.14e-14!32;CL:0002620!2.69e-07!23;CL:0002371!5.78e-07!591;CL:0002078!7.25e-07!44 | |ontology_enrichment_celltype=CL:0000055!3.34e-39!180;CL:0000222!3.68e-24!119;CL:0000183!1.70e-22!59;CL:0000187!6.16e-20!54;CL:0000680!2.15e-19!57;CL:0000056!2.15e-19!57;CL:0000355!2.15e-19!57;CL:0000220!2.88e-19!246;CL:0002321!7.97e-19!248;CL:0000192!7.43e-18!42;CL:0000514!7.43e-18!42;CL:0000393!3.80e-17!60;CL:0000211!3.80e-17!60;CL:0000057!2.34e-16!75;CL:0000359!4.14e-14!32;CL:0002620!2.69e-07!23;CL:0002371!5.78e-07!591;CL:0002078!7.25e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.23e-13;32!CL:0000192;5.70e-13;43!CL:0000187;3.67e-11;55!CL:0000393;2.72e-09;61!CL:0000211;2.72e-09;61!CL:0000057;9.73e-08;73!CL:0002620;2.56e-07;23 | |ontology_enrichment_celltype_v019=CL:0000359;2.23e-13;32!CL:0000192;5.70e-13;43!CL:0000187;3.67e-11;55!CL:0000393;2.72e-09;61!CL:0000211;2.72e-09;61!CL:0000057;9.73e-08;73!CL:0002620;2.56e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.62e-25,121;CL:0000187,2.91e-20,55;CL:0000680,1.01e-19,58;CL:0000056,1.01e-19,58;CL:0000355,1.01e-19,58;CL:0002321,1.56e-19,250;CL:0000192,3.79e-18,43;CL:0000514,3.79e-18,43;CL:0000393,1.82e-17,61;CL:0000211,1.82e-17,61;CL:0000057,6.65e-17,76;CL:0000359,3.39e-14,32;CL:0002620,2.45e-07,23;CL:0002078,4.70e-07,45;CL:0000115,7.83e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;5.70e-13;43!CL:0000355;1.27e-10;58!CL:0000222;5.63e-07;121 | |ontology_enrichment_development_v019=CL:0000514;5.70e-13;43!CL:0000355;1.27e-10;58!CL:0000222;5.63e-07;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@TGFB1I1 | |short_description=p1@TGFB1I1 | ||
}} | }} |
Latest revision as of 12:44, 16 September 2015
Short description: | p1@TGFB1I1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TGFB1I1_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_NM_001042454, uc002ecd.1_5end |
EntrezGene: | TGFB1I1 |
HGNC: | 11767 |
UniProt: | O43294 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.62e-25 | 121 |
muscle cell | 2.91e-20 | 55 |
muscle precursor cell | 1.01e-19 | 58 |
myoblast | 1.01e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-19 | 58 |
embryonic cell | 1.56e-19 | 250 |
smooth muscle cell | 3.79e-18 | 43 |
smooth muscle myoblast | 3.79e-18 | 43 |
electrically responsive cell | 1.82e-17 | 61 |
electrically active cell | 1.82e-17 | 61 |
fibroblast | 6.65e-17 | 76 |
vascular associated smooth muscle cell | 3.39e-14 | 32 |
skin fibroblast | 2.45e-07 | 23 |
meso-epithelial cell | 4.70e-07 | 45 |
endothelial cell | 7.83e-07 | 36 |