FFCP PHASE1:Hg19::chr20:44540784..44540804,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5360 | |EntrezGene=5360 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9093 | |HGNC=9093 | ||
|TSSclassifier=strong | |||
|UniProt=P55058,E7EV16 | |UniProt=P55058,E7EV16 | ||
|association_with_transcript=0bp_to_ENST00000354050,ENST00000372431,ENST00000420868,uc002xqn.1,uc002xqo.1,uc002xqp.1,uc002xqq.1,uc010ghj.1,uc010zxj.1_5end | |association_with_transcript=0bp_to_ENST00000354050,ENST00000372431,ENST00000420868,uc002xqn.1,uc002xqo.1,uc002xqp.1,uc002xqq.1,uc010ghj.1,uc010zxj.1_5end | ||
|cluster_id=chr20:44540784..44540804,- | |||
|description=CAGE_peak_1_at_PLTP_5end | |description=CAGE_peak_1_at_PLTP_5end | ||
|id=chr20:44540784..44540804,- | |id=chr20:44540784..44540804,- | ||
|ontology_enrichment_celltype=CL:0002321!1.57e-07!248;CL:0000220!2.85e-07!246;CL:0000325!3.34e-07!39;CL:0000183!7.78e-07!59 | |ontology_enrichment_celltype=CL:0002321!1.57e-07!248;CL:0000220!2.85e-07!246;CL:0000325!3.34e-07!39;CL:0000183!7.78e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.67e-07,250;CL:0000393,9.54e-07,61;CL:0000211,9.54e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.98e-18!659;UBERON:0000922!1.18e-17!612;UBERON:0000119!3.03e-17!312;UBERON:0000483!5.17e-17!309;UBERON:0000481!9.19e-17!347;UBERON:0007023!6.07e-16!115;UBERON:0002050!6.48e-16!605;UBERON:0005423!6.48e-16!605;UBERON:0000923!1.03e-15!604;UBERON:0005291!1.03e-15!604;UBERON:0006598!1.03e-15!604;UBERON:0002532!1.03e-15!604;UBERON:0000475!4.26e-15!365;UBERON:0000480!6.48e-13!626;UBERON:0000467!7.51e-13!625;UBERON:0000477!1.24e-11!286;UBERON:0004111!3.39e-11!241;UBERON:0000025!7.44e-11!194;UBERON:0002346!2.89e-10!90;UBERON:0005743!3.46e-10!86;UBERON:0003075!1.16e-09!86;UBERON:0007284!1.16e-09!86;UBERON:0000153!2.16e-09!129;UBERON:0007811!2.16e-09!129;UBERON:0000073!2.60e-09!94;UBERON:0001016!2.60e-09!94;UBERON:0000033!2.60e-09!123;UBERON:0001017!7.32e-09!82;UBERON:0000924!8.09e-09!173;UBERON:0006601!8.09e-09!173;UBERON:0000062!2.19e-08!511;UBERON:0004121!2.71e-08!169;UBERON:0003103!7.50e-08!69;UBERON:0000464!9.68e-08!104;UBERON:0002616!2.54e-07!59;UBERON:0007100!3.06e-07!27;UBERON:0001048!4.08e-07!168;UBERON:0000466!4.58e-07!126;UBERON:0003056!7.79e-07!61;UBERON:0000955!9.54e-07!69;UBERON:0006238!9.54e-07!69 | |ontology_enrichment_uberon=UBERON:0000468!3.98e-18!659;UBERON:0000922!1.18e-17!612;UBERON:0000119!3.03e-17!312;UBERON:0000483!5.17e-17!309;UBERON:0000481!9.19e-17!347;UBERON:0007023!6.07e-16!115;UBERON:0002050!6.48e-16!605;UBERON:0005423!6.48e-16!605;UBERON:0000923!1.03e-15!604;UBERON:0005291!1.03e-15!604;UBERON:0006598!1.03e-15!604;UBERON:0002532!1.03e-15!604;UBERON:0000475!4.26e-15!365;UBERON:0000480!6.48e-13!626;UBERON:0000467!7.51e-13!625;UBERON:0000477!1.24e-11!286;UBERON:0004111!3.39e-11!241;UBERON:0000025!7.44e-11!194;UBERON:0002346!2.89e-10!90;UBERON:0005743!3.46e-10!86;UBERON:0003075!1.16e-09!86;UBERON:0007284!1.16e-09!86;UBERON:0000153!2.16e-09!129;UBERON:0007811!2.16e-09!129;UBERON:0000073!2.60e-09!94;UBERON:0001016!2.60e-09!94;UBERON:0000033!2.60e-09!123;UBERON:0001017!7.32e-09!82;UBERON:0000924!8.09e-09!173;UBERON:0006601!8.09e-09!173;UBERON:0000062!2.19e-08!511;UBERON:0004121!2.71e-08!169;UBERON:0003103!7.50e-08!69;UBERON:0000464!9.68e-08!104;UBERON:0002616!2.54e-07!59;UBERON:0007100!3.06e-07!27;UBERON:0001048!4.08e-07!168;UBERON:0000466!4.58e-07!126;UBERON:0003056!7.79e-07!61;UBERON:0000955!9.54e-07!69;UBERON:0006238!9.54e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.31e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0007100;4.31e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.96e-17,309;UBERON:0000483,3.36e-17,306;UBERON:0007023,6.72e-16,114;UBERON:0000922,4.09e-14,592;UBERON:0005423,2.80e-13,581;UBERON:0002050,4.35e-13,564;UBERON:0000923,3.44e-12,560;UBERON:0010316,3.44e-12,560;UBERON:0005291,3.44e-12,560;UBERON:0006598,3.44e-12,560;UBERON:0010317,3.44e-12,560;UBERON:0002532,3.44e-12,560;UBERON:0011216,1.39e-11,223;UBERON:0004111,1.08e-10,240;UBERON:0002346,1.09e-10,86;UBERON:0000025,2.92e-10,192;UBERON:0010314,3.25e-10,132;UBERON:0003075,4.47e-10,82;UBERON:0007284,4.47e-10,82;UBERON:0004121,1.36e-09,171;UBERON:0000924,1.36e-09,171;UBERON:0006601,1.36e-09,171;UBERON:0001017,1.08e-08,81;UBERON:0010371,3.76e-08,104;UBERON:0001016,6.52e-08,89;UBERON:0001048,1.25e-07,160;UBERON:0003103,1.82e-07,68;UBERON:0007100,2.70e-07,27;UBERON:0003104,7.83e-07,160;UBERON:0009142,7.83e-07,160 | |||
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| ||
|short_description=p1@PLTP | |short_description=p1@PLTP | ||
}} | }} |
Latest revision as of 13:14, 16 September 2015
Short description: | p1@PLTP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLTP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354050, ENST00000372431, ENST00000420868, uc002xqn.1, uc002xqo.1, uc002xqp.1, uc002xqq.1, uc010ghj.1, uc010zxj.1_5end |
EntrezGene: | PLTP |
HGNC: | 9093 |
UniProt: | P55058E7EV16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.67e-07 | 250 |
electrically responsive cell | 9.54e-07 | 61 |
electrically active cell | 9.54e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.96e-17 | 309 |
epithelium | 3.36e-17 | 306 |
adult organism | 6.72e-16 | 114 |
embryo | 4.09e-14 | 592 |
developing anatomical structure | 2.80e-13 | 581 |
embryonic structure | 4.35e-13 | 564 |
germ layer | 3.44e-12 | 560 |
germ layer / neural crest | 3.44e-12 | 560 |
embryonic tissue | 3.44e-12 | 560 |
presumptive structure | 3.44e-12 | 560 |
germ layer / neural crest derived structure | 3.44e-12 | 560 |
epiblast (generic) | 3.44e-12 | 560 |
organ system subdivision | 1.39e-11 | 223 |
anatomical conduit | 1.08e-10 | 240 |
neurectoderm | 1.09e-10 | 86 |
tube | 2.92e-10 | 192 |
structure with developmental contribution from neural crest | 3.25e-10 | 132 |
neural plate | 4.47e-10 | 82 |
presumptive neural plate | 4.47e-10 | 82 |
ectoderm-derived structure | 1.36e-09 | 171 |
ectoderm | 1.36e-09 | 171 |
presumptive ectoderm | 1.36e-09 | 171 |
central nervous system | 1.08e-08 | 81 |
ecto-epithelium | 3.76e-08 | 104 |
nervous system | 6.52e-08 | 89 |
primordium | 1.25e-07 | 160 |
compound organ | 1.82e-07 | 68 |
primary circulatory organ | 2.70e-07 | 27 |
mesenchyme | 7.83e-07 | 160 |
entire embryonic mesenchyme | 7.83e-07 | 160 |