FFCP PHASE1:Hg19::chr20:45318230..45318303,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112858 | |EntrezGene=112858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16197 | |HGNC=16197 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S44 | |UniProt=Q96S44 | ||
|association_with_transcript=0bp_to_NM_033550,uc002xsk.2_5end | |association_with_transcript=0bp_to_NM_033550,uc002xsk.2_5end | ||
|cluster_id=chr20:45318230..45318303,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_TP53RK_5end | |description=CAGE_peak_2_at_TP53RK_5end | ||
|id=chr20:45318230..45318303,- | |id=chr20:45318230..45318303,- | ||
|ontology_enrichment_celltype=CL:0000542!3.80e-25!53;CL:0000051!3.80e-25!53;CL:0000838!9.30e-25!52;CL:0000037!2.40e-14!172;CL:0000566!2.40e-14!172;CL:0000988!3.84e-14!182;CL:0000738!4.51e-13!140;CL:0002032!1.46e-12!165;CL:0000837!1.46e-12!165;CL:0000945!1.76e-12!24;CL:0000826!1.76e-12!24;CL:0000084!2.01e-12!25;CL:0000827!2.01e-12!25;CL:0002031!5.25e-11!124;CL:0000791!2.09e-10!18;CL:0000789!2.09e-10!18;CL:0002420!2.09e-10!18;CL:0002419!2.09e-10!18;CL:0000790!2.09e-10!18;CL:0002087!3.88e-10!119;CL:0000236!1.51e-08!14;CL:0000625!1.53e-07!11 | |ontology_enrichment_celltype=CL:0000542!3.80e-25!53;CL:0000051!3.80e-25!53;CL:0000838!9.30e-25!52;CL:0000037!2.40e-14!172;CL:0000566!2.40e-14!172;CL:0000988!3.84e-14!182;CL:0000738!4.51e-13!140;CL:0002032!1.46e-12!165;CL:0000837!1.46e-12!165;CL:0000945!1.76e-12!24;CL:0000826!1.76e-12!24;CL:0000084!2.01e-12!25;CL:0000827!2.01e-12!25;CL:0002031!5.25e-11!124;CL:0000791!2.09e-10!18;CL:0000789!2.09e-10!18;CL:0002420!2.09e-10!18;CL:0002419!2.09e-10!18;CL:0000790!2.09e-10!18;CL:0002087!3.88e-10!119;CL:0000236!1.51e-08!14;CL:0000625!1.53e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;6.44e-17;53!CL:0000945;3.11e-14;24!CL:0000084;5.40e-14;25!CL:0000791;1.13e-11;18!CL:0000789;1.13e-11;18!CL:0002419;1.13e-11;18!CL:0000236;2.90e-09;13!CL:0000625;2.03e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.53e-28,53;CL:0000051,1.53e-28,53;CL:0000838,4.27e-28,52;CL:0000037,1.85e-16,168;CL:0000738,4.86e-16,136;CL:0000988,9.92e-16,177;CL:0002032,2.16e-14,161;CL:0000837,2.16e-14,161;CL:0000945,4.78e-14,24;CL:0000826,4.78e-14,24;CL:0000084,5.57e-14,25;CL:0000827,5.57e-14,25;CL:0002031,2.15e-13,120;CL:0002087,2.61e-12,115;CL:0000791,1.13e-11,18;CL:0000789,1.13e-11,18;CL:0002420,1.13e-11,18;CL:0002419,1.13e-11,18;CL:0000790,1.13e-11,18;CL:0000236,1.50e-09,14;CL:0000625,2.10e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;6.44e-17;53!CL:0000790;1.13e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.34e-29!115;UBERON:0001049!1.04e-14!57;UBERON:0005068!1.04e-14!57;UBERON:0006241!1.04e-14!57;UBERON:0007135!1.04e-14!57;UBERON:0002616!3.63e-12!59;UBERON:0003080!5.01e-11!42;UBERON:0002780!8.56e-11!41;UBERON:0001890!8.56e-11!41;UBERON:0006240!8.56e-11!41;UBERON:0005743!1.80e-10!86;UBERON:0002346!4.48e-10!90;UBERON:0001017!5.36e-10!82;UBERON:0000073!1.05e-09!94;UBERON:0001016!1.05e-09!94;UBERON:0003075!1.08e-09!86;UBERON:0007284!1.08e-09!86;UBERON:0000955!3.18e-09!69;UBERON:0006238!3.18e-09!69;UBERON:0003056!5.33e-08!61;UBERON:0001893!5.52e-08!34;UBERON:0002020!6.12e-08!34;UBERON:0003528!6.12e-08!34;UBERON:0002791!8.10e-08!33;UBERON:0001869!4.05e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!6.34e-29!115;UBERON:0001049!1.04e-14!57;UBERON:0005068!1.04e-14!57;UBERON:0006241!1.04e-14!57;UBERON:0007135!1.04e-14!57;UBERON:0002616!3.63e-12!59;UBERON:0003080!5.01e-11!42;UBERON:0002780!8.56e-11!41;UBERON:0001890!8.56e-11!41;UBERON:0006240!8.56e-11!41;UBERON:0005743!1.80e-10!86;UBERON:0002346!4.48e-10!90;UBERON:0001017!5.36e-10!82;UBERON:0000073!1.05e-09!94;UBERON:0001016!1.05e-09!94;UBERON:0003075!1.08e-09!86;UBERON:0007284!1.08e-09!86;UBERON:0000955!3.18e-09!69;UBERON:0006238!3.18e-09!69;UBERON:0003056!5.33e-08!61;UBERON:0001893!5.52e-08!34;UBERON:0002020!6.12e-08!34;UBERON:0003528!6.12e-08!34;UBERON:0002791!8.10e-08!33;UBERON:0001869!4.05e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.72e-08;53!UBERON:0002616;1.72e-08;53!UBERON:0007023;2.34e-08;114!UBERON:0002780;8.59e-08;41!UBERON:0001890;8.59e-08;41!UBERON:0000178;3.16e-07;15!UBERON:0000179;3.16e-07;15!UBERON:0000463;3.16e-07;15 | |||
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| ||
|short_description=p2@TP53RK | |short_description=p2@TP53RK | ||
}} | }} |
Latest revision as of 15:14, 16 September 2015
Short description: | p2@TP53RK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TP53RK_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_NM_033550, uc002xsk.2_5end |
EntrezGene: | TP53RK |
HGNC: | 16197 |
UniProt: | Q96S44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.53e-28 | 53 |
common lymphoid progenitor | 1.53e-28 | 53 |
lymphoid lineage restricted progenitor cell | 4.27e-28 | 52 |
hematopoietic stem cell | 1.85e-16 | 168 |
leukocyte | 4.86e-16 | 136 |
hematopoietic cell | 9.92e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.16e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-14 | 161 |
lymphocyte of B lineage | 4.78e-14 | 24 |
pro-B cell | 4.78e-14 | 24 |
T cell | 5.57e-14 | 25 |
pro-T cell | 5.57e-14 | 25 |
hematopoietic lineage restricted progenitor cell | 2.15e-13 | 120 |
nongranular leukocyte | 2.61e-12 | 115 |
mature alpha-beta T cell | 1.13e-11 | 18 |
alpha-beta T cell | 1.13e-11 | 18 |
immature T cell | 1.13e-11 | 18 |
mature T cell | 1.13e-11 | 18 |
immature alpha-beta T cell | 1.13e-11 | 18 |
B cell | 1.50e-09 | 14 |
CD8-positive, alpha-beta T cell | 2.10e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.52e-31 | 114 |
neural tube | 2.32e-14 | 56 |
neural rod | 2.32e-14 | 56 |
future spinal cord | 2.32e-14 | 56 |
neural keel | 2.32e-14 | 56 |
regional part of nervous system | 2.63e-13 | 53 |
regional part of brain | 2.63e-13 | 53 |
neurectoderm | 6.54e-11 | 86 |
regional part of forebrain | 1.26e-10 | 41 |
forebrain | 1.26e-10 | 41 |
anterior neural tube | 1.26e-10 | 41 |
future forebrain | 1.26e-10 | 41 |
neural plate | 1.60e-10 | 82 |
presumptive neural plate | 1.60e-10 | 82 |
central nervous system | 3.30e-09 | 81 |
brain | 3.74e-09 | 68 |
future brain | 3.74e-09 | 68 |
nervous system | 7.19e-09 | 89 |
pre-chordal neural plate | 1.30e-07 | 61 |
telencephalon | 1.47e-07 | 34 |
brain grey matter | 1.64e-07 | 34 |
gray matter | 1.64e-07 | 34 |
blood | 2.99e-07 | 15 |
haemolymphatic fluid | 2.99e-07 | 15 |
organism substance | 2.99e-07 | 15 |
regional part of telencephalon | 6.74e-07 | 32 |