FFCP PHASE1:Hg19::chr3:171178228..171178242,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23043 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30765 | |||
|TSSclassifier=strong | |||
|UniProt=F5H865,Q9UKE5,F5H5M9 | |||
|association_with_transcript=-31bp_to_ENST00000341852,ENST00000369326,ENST00000436636,ENST00000538048,NM_001161560,NM_001161561,NM_001161562,NM_001161563,NM_001161564,NM_001161565,NM_001161566,NM_015028,NR_027767,uc003fhh.2,uc003fhi.2,uc003fhj.2,uc003fhk.2,uc003fhl.2,uc003fhm.2,uc003 | |||
|cluster_id=chr3:171178228..171178242,- | |||
|coexpression_cluster_id=C4306 | |||
|description=CAGE_peak_4_at_TNIK_5end | |||
|id=chr3:171178228..171178242,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.59e-28!115;UBERON:0001049!1.70e-23!57;UBERON:0005068!1.70e-23!57;UBERON:0006241!1.70e-23!57;UBERON:0007135!1.70e-23!57;UBERON:0005743!6.00e-21!86;UBERON:0000073!6.10e-21!94;UBERON:0001016!6.10e-21!94;UBERON:0002616!2.43e-20!59;UBERON:0001017!4.53e-20!82;UBERON:0002780!5.16e-20!41;UBERON:0001890!5.16e-20!41;UBERON:0006240!5.16e-20!41;UBERON:0000955!3.22e-19!69;UBERON:0006238!3.22e-19!69;UBERON:0003080!6.89e-19!42;UBERON:0001893!9.49e-17!34;UBERON:0002020!1.04e-16!34;UBERON:0003528!1.04e-16!34;UBERON:0002791!3.84e-16!33;UBERON:0003075!9.41e-16!86;UBERON:0007284!9.41e-16!86;UBERON:0001869!1.59e-15!32;UBERON:0002346!1.06e-13!90;UBERON:0002619!5.78e-13!22;UBERON:0003056!2.05e-12!61;UBERON:0001950!7.30e-12!20;UBERON:0000956!1.68e-11!25;UBERON:0000203!1.68e-11!25;UBERON:0000025!2.73e-09!194;UBERON:0004111!7.39e-09!241;UBERON:0000153!9.03e-09!129;UBERON:0007811!9.03e-09!129;UBERON:0000033!7.47e-08!123;UBERON:0002308!7.79e-07!9;UBERON:0000125!7.79e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.25e-19;41!UBERON:0001890;1.25e-19;41!UBERON:0001893;2.80e-19;34!UBERON:0003528;4.93e-19;34!UBERON:0002020;4.93e-19;34!UBERON:0001869;8.71e-19;32!UBERON:0002791;8.84e-19;32!UBERON:0000073;1.09e-17;53!UBERON:0002616;1.09e-17;53!UBERON:0002619;1.53e-17;22!UBERON:0001950;5.40e-16;20!UBERON:0000956;1.43e-15;25!UBERON:0000203;1.43e-15;25!UBERON:0000955;4.60e-11;68!UBERON:0001017;2.68e-10;75!UBERON:0001016;2.20e-09;83!UBERON:0000125;1.32e-08;9!UBERON:0002308;1.32e-08;9!UBERON:0007023;3.13e-08;114!UBERON:0002420;4.75e-08;9!UBERON:0007245;4.75e-08;9!UBERON:0010009;4.75e-08;9!UBERON:0010011;4.75e-08;9!UBERON:0000454;4.75e-08;9!UBERON:0009663;5.90e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.15e-32,56;UBERON:0005068,7.15e-32,56;UBERON:0006241,7.15e-32,56;UBERON:0007135,7.15e-32,56;UBERON:0000073,5.29e-30,53;UBERON:0002616,5.29e-30,53;UBERON:0007023,1.25e-27,114;UBERON:0002780,1.43e-27,41;UBERON:0001890,1.43e-27,41;UBERON:0003080,1.43e-27,41;UBERON:0006240,1.43e-27,41;UBERON:0000955,1.17e-23,68;UBERON:0006238,1.17e-23,68;UBERON:0001017,1.67e-23,81;UBERON:0001016,4.39e-23,89;UBERON:0001893,4.72e-23,34;UBERON:0003528,5.36e-23,34;UBERON:0002020,5.36e-23,34;UBERON:0001869,2.35e-21,32;UBERON:0002791,2.46e-21,32;UBERON:0003075,2.15e-20,82;UBERON:0007284,2.15e-20,82;UBERON:0002346,1.94e-18,86;UBERON:0002619,7.57e-18,22;UBERON:0003056,3.20e-17,61;UBERON:0001950,2.53e-16,20;UBERON:0000956,8.96e-16,25;UBERON:0000203,8.96e-16,25;UBERON:0010371,4.19e-15,104;UBERON:0010314,2.56e-11,132;UBERON:0011216,1.05e-10,223;UBERON:0000025,4.86e-10,192;UBERON:0000125,7.68e-09,9;UBERON:0002308,7.68e-09,9;UBERON:0002420,1.58e-08,9;UBERON:0007245,1.58e-08,9;UBERON:0010009,1.58e-08,9;UBERON:0010011,1.58e-08,9;UBERON:0000454,1.58e-08,9;UBERON:0004111,2.77e-08,240;UBERON:0004121,8.51e-08,171;UBERON:0000924,8.51e-08,171;UBERON:0006601,8.51e-08,171;UBERON:0009663,3.46e-07,7 | |||
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| |||
|short_description=p4@TNIK | |||
}} |
Latest revision as of 17:19, 16 September 2015
Short description: | p4@TNIK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNIK_5end |
Coexpression cluster: | C4306_Mast_hippocampus_amygdala_occipital_caudate_putamen_parietal |
Association with transcript: | -31bp_to_ENST00000341852, ENST00000369326, ENST00000436636, ENST00000538048, NM_001161560, NM_001161561, NM_001161562, NM_001161563, NM_001161564, NM_001161565, NM_001161566, NM_015028, NR_027767, uc003fhh.2, uc003fhi.2, uc003fhj.2, uc003fhk.2, uc003fhl.2, uc003fhm.2, uc003 |
EntrezGene: | TNIK |
HGNC: | 30765 |
UniProt: | F5H865Q9UKE5F5H5M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data