FFCP PHASE1:Hg19::chr11:13690200..13690244,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84188 | |EntrezGene=84188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26222 | |HGNC=26222 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVX9 | |UniProt=Q8WVX9 | ||
|association_with_transcript=0bp_to_ENST00000354817,NM_032228,uc001mld.2,uc009ygp.2_5end | |association_with_transcript=0bp_to_ENST00000354817,NM_032228,uc001mld.2,uc009ygp.2_5end | ||
|cluster_id=chr11:13690200..13690244,+ | |||
|description=CAGE_peak_1_at_FAR1_5end | |description=CAGE_peak_1_at_FAR1_5end | ||
|id=chr11:13690200..13690244,+ | |id=chr11:13690200..13690244,+ | ||
|ontology_enrichment_celltype=CL:0000557!3.54e-27!71;CL:0000839!2.17e-26!70;CL:0000766!6.47e-26!76;CL:0000763!4.40e-25!112;CL:0000049!4.40e-25!112;CL:0002009!6.99e-24!65;CL:0002194!3.27e-23!63;CL:0000576!3.27e-23!63;CL:0000040!3.27e-23!63;CL:0000559!3.27e-23!63;CL:0002057!7.87e-19!42;CL:0000860!5.84e-17!45;CL:0002032!2.43e-16!165;CL:0000837!2.43e-16!165;CL:0000738!2.92e-16!140;CL:0000037!3.04e-16!172;CL:0000566!3.04e-16!172;CL:0002031!3.52e-15!124;CL:0000988!8.04e-14!182;CL:0002087!9.85e-12!119 | |ontology_enrichment_celltype=CL:0000557!3.54e-27!71;CL:0000839!2.17e-26!70;CL:0000766!6.47e-26!76;CL:0000763!4.40e-25!112;CL:0000049!4.40e-25!112;CL:0002009!6.99e-24!65;CL:0002194!3.27e-23!63;CL:0000576!3.27e-23!63;CL:0000040!3.27e-23!63;CL:0000559!3.27e-23!63;CL:0002057!7.87e-19!42;CL:0000860!5.84e-17!45;CL:0002032!2.43e-16!165;CL:0000837!2.43e-16!165;CL:0000738!2.92e-16!140;CL:0000037!3.04e-16!172;CL:0000566!3.04e-16!172;CL:0002031!3.52e-15!124;CL:0000988!8.04e-14!182;CL:0002087!9.85e-12!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.80e-17;33!CL:0002057;5.80e-17;33!CL:0000473;3.30e-15;39!CL:0000234;3.30e-15;39!CL:0000576;3.87e-14;48!CL:0000766;3.09e-12;69!CL:0000763;3.13e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.66e-29,67;CL:0000839,2.38e-28,66;CL:0000766,1.06e-27,72;CL:0000763,2.70e-26,108;CL:0000049,2.70e-26,108;CL:0002009,8.38e-26,61;CL:0002194,3.85e-25,59;CL:0000576,3.85e-25,59;CL:0000040,3.85e-25,59;CL:0000559,3.85e-25,59;CL:0000473,4.77e-20,48;CL:0000234,4.77e-20,48;CL:0000860,7.87e-19,42;CL:0002057,7.87e-19,42;CL:0000738,5.96e-17,136;CL:0002032,6.07e-17,161;CL:0000837,6.07e-17,161;CL:0000037,8.04e-17,168;CL:0002031,6.66e-16,120;CL:0000988,9.24e-15,177;CL:0002087,2.46e-12,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.94e-14;42!CL:0000049;2.13e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.46e-22!80;UBERON:0001474!9.63e-21!86;UBERON:0004765!1.34e-19!101;UBERON:0001434!1.34e-19!101;UBERON:0002390!5.91e-19!102;UBERON:0003061!5.91e-19!102;UBERON:0002193!1.39e-16!112;UBERON:0001049!8.01e-13!57;UBERON:0005068!8.01e-13!57;UBERON:0006241!8.01e-13!57;UBERON:0007135!8.01e-13!57;UBERON:0001017!1.52e-11!82;UBERON:0007023!1.60e-11!115;UBERON:0003080!2.40e-11!42;UBERON:0002780!3.12e-11!41;UBERON:0001890!3.12e-11!41;UBERON:0006240!3.12e-11!41;UBERON:0000955!3.56e-11!69;UBERON:0006238!3.56e-11!69;UBERON:0002616!3.85e-11!59;UBERON:0005743!2.09e-10!86;UBERON:0000073!5.75e-10!94;UBERON:0001016!5.75e-10!94;UBERON:0003075!4.21e-09!86;UBERON:0007284!4.21e-09!86;UBERON:0002020!4.46e-09!34;UBERON:0003528!4.46e-09!34;UBERON:0001893!8.43e-09!34;UBERON:0000033!1.40e-08!123;UBERON:0002791!1.50e-08!33;UBERON:0001869!1.70e-08!32;UBERON:0000153!2.39e-08!129;UBERON:0007811!2.39e-08!129;UBERON:0002405!5.12e-08!115;UBERON:0002346!7.38e-08!90;UBERON:0002204!7.63e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.71e-08;41!UBERON:0001890;1.71e-08;41!UBERON:0003528;5.06e-08;34!UBERON:0002020;5.06e-08;34!UBERON:0001869;5.49e-08;32!UBERON:0002791;6.76e-08;32!UBERON:0001893;8.43e-08;34!UBERON:0000073;3.21e-07;53!UBERON:0002616;3.21e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.57e-23,76;UBERON:0001474,4.74e-22,82;UBERON:0002390,5.43e-20,98;UBERON:0003061,5.43e-20,98;UBERON:0004765,1.48e-19,90;UBERON:0001434,7.32e-19,100;UBERON:0002405,1.57e-18,93;UBERON:0002193,1.98e-17,108;UBERON:0001049,1.07e-12,56;UBERON:0005068,1.07e-12,56;UBERON:0006241,1.07e-12,56;UBERON:0007135,1.07e-12,56;UBERON:0000073,9.85e-12,53;UBERON:0002616,9.85e-12,53;UBERON:0001017,2.09e-11,81;UBERON:0002780,3.12e-11,41;UBERON:0001890,3.12e-11,41;UBERON:0003080,3.12e-11,41;UBERON:0006240,3.12e-11,41;UBERON:0007023,3.25e-11,114;UBERON:0000955,4.87e-11,68;UBERON:0006238,4.87e-11,68;UBERON:0001016,7.43e-11,89;UBERON:0003528,4.46e-09,34;UBERON:0002020,4.46e-09,34;UBERON:0001893,8.43e-09,34;UBERON:0003075,1.36e-08,82;UBERON:0007284,1.36e-08,82;UBERON:0001869,1.70e-08,32;UBERON:0002791,2.64e-08,32;UBERON:0002346,2.27e-07,86 | |||
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| ||
|short_description=p1@FAR1 | |short_description=p1@FAR1 | ||
}} | }} |
Latest revision as of 21:03, 16 September 2015
Short description: | p1@FAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354817, NM_032228, uc001mld.2, uc009ygp.2_5end |
EntrezGene: | FAR1 |
HGNC: | 26222 |
UniProt: | Q8WVX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.66e-29 | 67 |
myeloid lineage restricted progenitor cell | 2.38e-28 | 66 |
myeloid leukocyte | 1.06e-27 | 72 |
myeloid cell | 2.70e-26 | 108 |
common myeloid progenitor | 2.70e-26 | 108 |
macrophage dendritic cell progenitor | 8.38e-26 | 61 |
monopoietic cell | 3.85e-25 | 59 |
monocyte | 3.85e-25 | 59 |
monoblast | 3.85e-25 | 59 |
promonocyte | 3.85e-25 | 59 |
defensive cell | 4.77e-20 | 48 |
phagocyte | 4.77e-20 | 48 |
classical monocyte | 7.87e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.87e-19 | 42 |
leukocyte | 5.96e-17 | 136 |
hematopoietic oligopotent progenitor cell | 6.07e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.07e-17 | 161 |
hematopoietic stem cell | 8.04e-17 | 168 |
hematopoietic lineage restricted progenitor cell | 6.66e-16 | 120 |
hematopoietic cell | 9.24e-15 | 177 |
nongranular leukocyte | 2.46e-12 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.57e-23 | 76 |
bone element | 4.74e-22 | 82 |
hematopoietic system | 5.43e-20 | 98 |
blood island | 5.43e-20 | 98 |
skeletal element | 1.48e-19 | 90 |
skeletal system | 7.32e-19 | 100 |
immune system | 1.57e-18 | 93 |
hemolymphoid system | 1.98e-17 | 108 |
neural tube | 1.07e-12 | 56 |
neural rod | 1.07e-12 | 56 |
future spinal cord | 1.07e-12 | 56 |
neural keel | 1.07e-12 | 56 |
regional part of nervous system | 9.85e-12 | 53 |
regional part of brain | 9.85e-12 | 53 |
central nervous system | 2.09e-11 | 81 |
regional part of forebrain | 3.12e-11 | 41 |
forebrain | 3.12e-11 | 41 |
anterior neural tube | 3.12e-11 | 41 |
future forebrain | 3.12e-11 | 41 |
adult organism | 3.25e-11 | 114 |
brain | 4.87e-11 | 68 |
future brain | 4.87e-11 | 68 |
nervous system | 7.43e-11 | 89 |
brain grey matter | 4.46e-09 | 34 |
gray matter | 4.46e-09 | 34 |
telencephalon | 8.43e-09 | 34 |
neural plate | 1.36e-08 | 82 |
presumptive neural plate | 1.36e-08 | 82 |
cerebral hemisphere | 1.70e-08 | 32 |
regional part of telencephalon | 2.64e-08 | 32 |
neurectoderm | 2.27e-07 | 86 |