FFCP PHASE1:Hg19::chr19:23941680..23941704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148213 | |EntrezGene=148213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26457 | |HGNC=26457 | ||
|TSSclassifier=strong | |||
|UniProt=Q96N22 | |UniProt=Q96N22 | ||
|association_with_transcript=0bp_to_ENST00000402377,NM_138286,uc002nrj.3,uc002nrk.3,uc002nrl.3_5end | |association_with_transcript=0bp_to_ENST00000402377,NM_138286,uc002nrj.3,uc002nrk.3,uc002nrl.3_5end | ||
|cluster_id=chr19:23941680..23941704,- | |||
|description=CAGE_peak_1_at_ZNF681_5end | |description=CAGE_peak_1_at_ZNF681_5end | ||
|id=chr19:23941680..23941704,- | |id=chr19:23941680..23941704,- | ||
|ontology_enrichment_celltype=CL:0000838!2.32e-12!52;CL:0000542!3.05e-12!53;CL:0000051!3.05e-12!53;CL:0000791!2.01e-10!18;CL:0000789!2.01e-10!18;CL:0002420!2.01e-10!18;CL:0002419!2.01e-10!18;CL:0000790!2.01e-10!18;CL:0000084!9.96e-08!25;CL:0000827!9.96e-08!25;CL:0000625!4.41e-07!11;CL:0000236!8.98e-07!14 | |ontology_enrichment_celltype=CL:0000838!2.32e-12!52;CL:0000542!3.05e-12!53;CL:0000051!3.05e-12!53;CL:0000791!2.01e-10!18;CL:0000789!2.01e-10!18;CL:0002420!2.01e-10!18;CL:0002419!2.01e-10!18;CL:0000790!2.01e-10!18;CL:0000084!9.96e-08!25;CL:0000827!9.96e-08!25;CL:0000625!4.41e-07!11;CL:0000236!8.98e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.99e-11;18!CL:0000789;6.99e-11;18!CL:0002419;6.99e-11;18!CL:0000542;8.14e-09;53!CL:0000084;2.10e-08;25!CL:0000236;1.52e-07;13!CL:0000625;2.27e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.97e-13,52;CL:0000542,7.97e-13,53;CL:0000051,7.97e-13,53;CL:0000791,9.65e-11,18;CL:0000789,9.65e-11,18;CL:0002420,9.65e-11,18;CL:0002419,9.65e-11,18;CL:0000790,9.65e-11,18;CL:0000084,2.79e-08,25;CL:0000827,2.79e-08,25;CL:0000625,2.79e-07,11;CL:0000236,5.81e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;6.99e-11;18!CL:0000051;8.14e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.20e-16!94;UBERON:0001016!1.20e-16!94;UBERON:0005743!2.31e-16!86;UBERON:0001017!3.35e-16!82;UBERON:0001049!9.02e-14!57;UBERON:0005068!9.02e-14!57;UBERON:0006241!9.02e-14!57;UBERON:0007135!9.02e-14!57;UBERON:0002346!9.59e-14!90;UBERON:0003075!5.35e-13!86;UBERON:0007284!5.35e-13!86;UBERON:0000955!1.17e-11!69;UBERON:0006238!1.17e-11!69;UBERON:0000924!1.29e-11!173;UBERON:0006601!1.29e-11!173;UBERON:0002616!1.59e-11!59;UBERON:0003080!5.80e-11!42;UBERON:0002780!5.93e-11!41;UBERON:0001890!5.93e-11!41;UBERON:0006240!5.93e-11!41;UBERON:0004121!5.98e-11!169;UBERON:0003056!1.25e-10!61;UBERON:0002020!1.64e-10!34;UBERON:0003528!1.64e-10!34;UBERON:0001869!3.42e-10!32;UBERON:0007023!4.19e-10!115;UBERON:0000956!5.79e-10!25;UBERON:0000203!5.79e-10!25;UBERON:0001893!6.93e-10!34;UBERON:0002791!9.95e-10!33;UBERON:0000153!7.28e-09!129;UBERON:0007811!7.28e-09!129;UBERON:0002619!8.53e-09!22;UBERON:0001950!2.27e-08!20;UBERON:0000033!1.65e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.95e-10;25!UBERON:0000203;3.95e-10;25!UBERON:0001869;7.13e-10;32!UBERON:0002791;8.66e-10;32!UBERON:0003528;1.24e-09;34!UBERON:0002020;1.24e-09;34!UBERON:0001893;3.29e-09;34!UBERON:0002619;6.42e-09;22!UBERON:0001950;1.62e-08;20!UBERON:0002780;2.44e-08;41!UBERON:0001890;2.44e-08;41!UBERON:0000073;7.97e-08;53!UBERON:0002616;7.97e-08;53!UBERON:0000922;9.40e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.02e-16,89;UBERON:0001017,1.84e-16,81;UBERON:0001049,3.45e-14,56;UBERON:0005068,3.45e-14,56;UBERON:0006241,3.45e-14,56;UBERON:0007135,3.45e-14,56;UBERON:0000073,2.53e-13,53;UBERON:0002616,2.53e-13,53;UBERON:0002346,5.17e-13,86;UBERON:0003075,2.97e-12,82;UBERON:0007284,2.97e-12,82;UBERON:0000955,9.04e-12,68;UBERON:0006238,9.04e-12,68;UBERON:0002780,1.94e-11,41;UBERON:0001890,1.94e-11,41;UBERON:0003080,1.94e-11,41;UBERON:0006240,1.94e-11,41;UBERON:0003528,5.43e-11,34;UBERON:0002020,5.43e-11,34;UBERON:0003056,8.36e-11,61;UBERON:0004121,1.15e-10,171;UBERON:0000924,1.15e-10,171;UBERON:0006601,1.15e-10,171;UBERON:0001869,1.16e-10,32;UBERON:0002791,1.64e-10,32;UBERON:0001893,2.45e-10,34;UBERON:0010371,2.62e-10,104;UBERON:0000956,2.88e-10,25;UBERON:0000203,2.88e-10,25;UBERON:0002619,4.69e-09,22;UBERON:0007023,5.22e-09,114;UBERON:0001950,1.29e-08,20;UBERON:0010314,9.21e-07,132 | |||
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| ||
|short_description=p1@ZNF681 | |short_description=p1@ZNF681 | ||
}} | }} |
Latest revision as of 00:32, 17 September 2015
Short description: | p1@ZNF681 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF681_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000402377, NM_138286, uc002nrj.3, uc002nrk.3, uc002nrl.3_5end |
EntrezGene: | ZNF681 |
HGNC: | 26457 |
UniProt: | Q96N22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.97e-13 | 52 |
lymphocyte | 7.97e-13 | 53 |
common lymphoid progenitor | 7.97e-13 | 53 |
mature alpha-beta T cell | 9.65e-11 | 18 |
alpha-beta T cell | 9.65e-11 | 18 |
immature T cell | 9.65e-11 | 18 |
mature T cell | 9.65e-11 | 18 |
immature alpha-beta T cell | 9.65e-11 | 18 |
T cell | 2.79e-08 | 25 |
pro-T cell | 2.79e-08 | 25 |
CD8-positive, alpha-beta T cell | 2.79e-07 | 11 |
B cell | 5.81e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.02e-16 | 89 |
central nervous system | 1.84e-16 | 81 |
neural tube | 3.45e-14 | 56 |
neural rod | 3.45e-14 | 56 |
future spinal cord | 3.45e-14 | 56 |
neural keel | 3.45e-14 | 56 |
regional part of nervous system | 2.53e-13 | 53 |
regional part of brain | 2.53e-13 | 53 |
neurectoderm | 5.17e-13 | 86 |
neural plate | 2.97e-12 | 82 |
presumptive neural plate | 2.97e-12 | 82 |
brain | 9.04e-12 | 68 |
future brain | 9.04e-12 | 68 |
regional part of forebrain | 1.94e-11 | 41 |
forebrain | 1.94e-11 | 41 |
anterior neural tube | 1.94e-11 | 41 |
future forebrain | 1.94e-11 | 41 |
brain grey matter | 5.43e-11 | 34 |
gray matter | 5.43e-11 | 34 |
pre-chordal neural plate | 8.36e-11 | 61 |
ectoderm-derived structure | 1.15e-10 | 171 |
ectoderm | 1.15e-10 | 171 |
presumptive ectoderm | 1.15e-10 | 171 |
cerebral hemisphere | 1.16e-10 | 32 |
regional part of telencephalon | 1.64e-10 | 32 |
telencephalon | 2.45e-10 | 34 |
ecto-epithelium | 2.62e-10 | 104 |
cerebral cortex | 2.88e-10 | 25 |
pallium | 2.88e-10 | 25 |
regional part of cerebral cortex | 4.69e-09 | 22 |
adult organism | 5.22e-09 | 114 |
neocortex | 1.29e-08 | 20 |
structure with developmental contribution from neural crest | 9.21e-07 | 132 |