FFCP PHASE1:Hg19::chr5:172483347..172483407,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153222 | |EntrezGene=153222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24050 | |HGNC=24050 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IUR6,F5GXN3 | |UniProt=Q8IUR6,F5GXN3 | ||
|association_with_transcript=0bp_to_ENST00000296953,ENST00000520420,ENST00000520464,ENST00000522692,ENST00000540014,NM_001168393,NM_001168394,NM_153607,uc003mcf.2,uc003mcg.2,uc003mch.2_5end | |association_with_transcript=0bp_to_ENST00000296953,ENST00000520420,ENST00000520464,ENST00000522692,ENST00000540014,NM_001168393,NM_001168394,NM_153607,uc003mcf.2,uc003mcg.2,uc003mch.2_5end | ||
|cluster_id=chr5:172483347..172483407,+ | |||
|coexpression_cluster_id=C176 | |coexpression_cluster_id=C176 | ||
|description=CAGE_peak_1_at_C5orf41_5end | |description=CAGE_peak_1_at_C5orf41_5end | ||
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|ontology_enrichment_celltype=CL:0000738!7.44e-28!140;CL:0002031!5.63e-22!124;CL:0002087!4.47e-20!119;CL:0000037!9.47e-20!172;CL:0000566!9.47e-20!172;CL:0002057!4.03e-18!42;CL:0000766!4.18e-18!76;CL:0002032!1.17e-17!165;CL:0000837!1.17e-17!165;CL:0000988!6.41e-17!182;CL:0000860!4.11e-16!45;CL:0000839!9.28e-15!70;CL:0000557!1.13e-14!71;CL:0002009!1.43e-13!65;CL:0002194!7.96e-13!63;CL:0000576!7.96e-13!63;CL:0000040!7.96e-13!63;CL:0000559!7.96e-13!63;CL:0000763!2.71e-11!112;CL:0000049!2.71e-11!112;CL:0000791!6.45e-09!18;CL:0000789!6.45e-09!18;CL:0002420!6.45e-09!18;CL:0002419!6.45e-09!18;CL:0000790!6.45e-09!18;CL:0000838!3.79e-07!52 | |ontology_enrichment_celltype=CL:0000738!7.44e-28!140;CL:0002031!5.63e-22!124;CL:0002087!4.47e-20!119;CL:0000037!9.47e-20!172;CL:0000566!9.47e-20!172;CL:0002057!4.03e-18!42;CL:0000766!4.18e-18!76;CL:0002032!1.17e-17!165;CL:0000837!1.17e-17!165;CL:0000988!6.41e-17!182;CL:0000860!4.11e-16!45;CL:0000839!9.28e-15!70;CL:0000557!1.13e-14!71;CL:0002009!1.43e-13!65;CL:0002194!7.96e-13!63;CL:0000576!7.96e-13!63;CL:0000040!7.96e-13!63;CL:0000559!7.96e-13!63;CL:0000763!2.71e-11!112;CL:0000049!2.71e-11!112;CL:0000791!6.45e-09!18;CL:0000789!6.45e-09!18;CL:0002420!6.45e-09!18;CL:0002419!6.45e-09!18;CL:0000790!6.45e-09!18;CL:0000838!3.79e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.57e-13;33!CL:0002057;6.57e-13;33!CL:0000576;3.79e-11;48!CL:0000473;1.69e-09;39!CL:0000234;1.69e-09;39!CL:0000766;2.38e-09;69!CL:0000791;5.44e-09;18!CL:0000789;5.44e-09;18!CL:0002419;5.44e-09;18!CL:0002087;7.02e-08;104 | |ontology_enrichment_celltype_v019=CL:0000860;6.57e-13;33!CL:0002057;6.57e-13;33!CL:0000576;3.79e-11;48!CL:0000473;1.69e-09;39!CL:0000234;1.69e-09;39!CL:0000766;2.38e-09;69!CL:0000791;5.44e-09;18!CL:0000789;5.44e-09;18!CL:0002419;5.44e-09;18!CL:0002087;7.02e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.11e-29,136;CL:0002031,1.18e-23,120;CL:0002087,1.07e-21,115;CL:0000037,4.45e-21,168;CL:0000766,3.98e-20,72;CL:0002032,6.35e-19,161;CL:0000837,6.35e-19,161;CL:0000988,1.78e-18,177;CL:0000860,3.81e-18,42;CL:0002057,3.81e-18,42;CL:0000839,1.35e-16,66;CL:0000557,1.74e-16,67;CL:0000473,7.64e-16,48;CL:0000234,7.64e-16,48;CL:0002009,2.16e-15,61;CL:0002194,1.31e-14,59;CL:0000576,1.31e-14,59;CL:0000040,1.31e-14,59;CL:0000559,1.31e-14,59;CL:0000763,1.92e-12,108;CL:0000049,1.92e-12,108;CL:0000791,6.29e-09,18;CL:0000789,6.29e-09,18;CL:0002420,6.29e-09,18;CL:0002419,6.29e-09,18;CL:0000790,6.29e-09,18;CL:0000838,3.41e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-13;42!CL:0000790;5.44e-09;18 | |ontology_enrichment_development_v019=CL:0002057;1.83e-13;42!CL:0000790;5.44e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.49e-36!115;UBERON:0002390!8.22e-18!102;UBERON:0003061!8.22e-18!102;UBERON:0002193!1.09e-15!112;UBERON:0001049!4.06e-14!57;UBERON:0005068!4.06e-14!57;UBERON:0006241!4.06e-14!57;UBERON:0007135!4.06e-14!57;UBERON:0002371!2.39e-12!80;UBERON:0003080!2.90e-12!42;UBERON:0002780!7.36e-12!41;UBERON:0001890!7.36e-12!41;UBERON:0006240!7.36e-12!41;UBERON:0001474!2.07e-11!86;UBERON:0002616!5.03e-11!59;UBERON:0002020!6.88e-10!34;UBERON:0003528!6.88e-10!34;UBERON:0000955!1.33e-09!69;UBERON:0006238!1.33e-09!69;UBERON:0001893!2.54e-09!34;UBERON:0002791!3.59e-09!33;UBERON:0002619!1.03e-08!22;UBERON:0001869!1.06e-08!32;UBERON:0001017!1.10e-08!82;UBERON:0004765!2.60e-08!101;UBERON:0001434!2.60e-08!101;UBERON:0002405!2.98e-08!115;UBERON:0005743!5.35e-08!86;UBERON:0001950!7.87e-08!20;UBERON:0000073!1.73e-07!94;UBERON:0001016!1.73e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!2.49e-36!115;UBERON:0002390!8.22e-18!102;UBERON:0003061!8.22e-18!102;UBERON:0002193!1.09e-15!112;UBERON:0001049!4.06e-14!57;UBERON:0005068!4.06e-14!57;UBERON:0006241!4.06e-14!57;UBERON:0007135!4.06e-14!57;UBERON:0002371!2.39e-12!80;UBERON:0003080!2.90e-12!42;UBERON:0002780!7.36e-12!41;UBERON:0001890!7.36e-12!41;UBERON:0006240!7.36e-12!41;UBERON:0001474!2.07e-11!86;UBERON:0002616!5.03e-11!59;UBERON:0002020!6.88e-10!34;UBERON:0003528!6.88e-10!34;UBERON:0000955!1.33e-09!69;UBERON:0006238!1.33e-09!69;UBERON:0001893!2.54e-09!34;UBERON:0002791!3.59e-09!33;UBERON:0002619!1.03e-08!22;UBERON:0001869!1.06e-08!32;UBERON:0001017!1.10e-08!82;UBERON:0004765!2.60e-08!101;UBERON:0001434!2.60e-08!101;UBERON:0002405!2.98e-08!115;UBERON:0005743!5.35e-08!86;UBERON:0001950!7.87e-08!20;UBERON:0000073!1.73e-07!94;UBERON:0001016!1.73e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.78e-10;114!UBERON:0002780;5.45e-09;41!UBERON:0001890;5.45e-09;41!UBERON:0002619;8.52e-09;22!UBERON:0003528;2.32e-08;34!UBERON:0002020;2.32e-08;34!UBERON:0002791;3.56e-08;32!UBERON:0001869;6.69e-08;32!UBERON:0001950;6.73e-08;20!UBERON:0001893;6.85e-08;34!UBERON:0000073;7.58e-08;53!UBERON:0002616;7.58e-08;53 | |ontology_enrichment_uberon_v019=UBERON:0007023;3.78e-10;114!UBERON:0002780;5.45e-09;41!UBERON:0001890;5.45e-09;41!UBERON:0002619;8.52e-09;22!UBERON:0003528;2.32e-08;34!UBERON:0002020;2.32e-08;34!UBERON:0002791;3.56e-08;32!UBERON:0001869;6.69e-08;32!UBERON:0001950;6.73e-08;20!UBERON:0001893;6.85e-08;34!UBERON:0000073;7.58e-08;53!UBERON:0002616;7.58e-08;53 | ||
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| ||
|short_description=p1@C5orf41 | |short_description=p1@C5orf41 | ||
}} | }} |
Latest revision as of 01:23, 17 September 2015
Short description: | p1@C5orf41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C5orf41_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000296953, ENST00000520420, ENST00000520464, ENST00000522692, ENST00000540014, NM_001168393, NM_001168394, NM_153607, uc003mcf.2, uc003mcg.2, uc003mch.2_5end |
EntrezGene: | C5orf41 |
HGNC: | 24050 |
UniProt: | Q8IUR6F5GXN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.11e-29 | 136 |
hematopoietic lineage restricted progenitor cell | 1.18e-23 | 120 |
nongranular leukocyte | 1.07e-21 | 115 |
hematopoietic stem cell | 4.45e-21 | 168 |
myeloid leukocyte | 3.98e-20 | 72 |
hematopoietic oligopotent progenitor cell | 6.35e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.35e-19 | 161 |
hematopoietic cell | 1.78e-18 | 177 |
classical monocyte | 3.81e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.81e-18 | 42 |
myeloid lineage restricted progenitor cell | 1.35e-16 | 66 |
granulocyte monocyte progenitor cell | 1.74e-16 | 67 |
defensive cell | 7.64e-16 | 48 |
phagocyte | 7.64e-16 | 48 |
macrophage dendritic cell progenitor | 2.16e-15 | 61 |
monopoietic cell | 1.31e-14 | 59 |
monocyte | 1.31e-14 | 59 |
monoblast | 1.31e-14 | 59 |
promonocyte | 1.31e-14 | 59 |
myeloid cell | 1.92e-12 | 108 |
common myeloid progenitor | 1.92e-12 | 108 |
mature alpha-beta T cell | 6.29e-09 | 18 |
alpha-beta T cell | 6.29e-09 | 18 |
immature T cell | 6.29e-09 | 18 |
mature T cell | 6.29e-09 | 18 |
immature alpha-beta T cell | 6.29e-09 | 18 |
lymphoid lineage restricted progenitor cell | 3.41e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.91e-36 | 114 |
hematopoietic system | 1.99e-19 | 98 |
blood island | 1.99e-19 | 98 |
hemolymphoid system | 4.78e-17 | 108 |
bone marrow | 8.24e-14 | 76 |
neural tube | 1.09e-13 | 56 |
neural rod | 1.09e-13 | 56 |
future spinal cord | 1.09e-13 | 56 |
neural keel | 1.09e-13 | 56 |
immune system | 8.14e-13 | 93 |
regional part of nervous system | 9.74e-13 | 53 |
regional part of brain | 9.74e-13 | 53 |
bone element | 1.02e-12 | 82 |
regional part of forebrain | 8.23e-12 | 41 |
forebrain | 8.23e-12 | 41 |
anterior neural tube | 8.23e-12 | 41 |
future forebrain | 8.23e-12 | 41 |
skeletal element | 1.39e-10 | 90 |
brain grey matter | 7.73e-10 | 34 |
gray matter | 7.73e-10 | 34 |
telencephalon | 2.84e-09 | 34 |
brain | 3.03e-09 | 68 |
future brain | 3.03e-09 | 68 |
regional part of telencephalon | 5.50e-09 | 32 |
skeletal system | 8.88e-09 | 100 |
regional part of cerebral cortex | 1.01e-08 | 22 |
cerebral hemisphere | 1.19e-08 | 32 |
central nervous system | 2.35e-08 | 81 |
neocortex | 7.71e-08 | 20 |
nervous system | 8.77e-08 | 89 |