FFCP PHASE1:Hg19::chr13:33112899..33112948,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:33112899..33112948,- to FFCP PHASE1:Hg19::chr13:33112899..33112948,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10443 | |EntrezGene=10443 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26916 | |HGNC=26916 | ||
|TSSclassifier=strong | |||
|UniProt=Q92802,B4DPY1,Q9Y3H6,Q6ZV26 | |UniProt=Q92802,B4DPY1,Q9Y3H6,Q6ZV26 | ||
|association_with_transcript=0bp_to_ENST00000267068,ENST00000357505,ENST00000399396,ENST00000511143,NM_014887,NM_033111,uc001uuk.3,uc010abe.1,uc010tdz.1_5end | |||
|cluster_id=chr13:33112899..33112948,- | |||
|coexpression_cluster_id=C1025 | |||
|description=CAGE_peak_1_at_N4BP2L2_5end | |||
|id=chr13:33112899..33112948,- | |||
|ontology_enrichment_celltype=CL:0000738!6.09e-17!140;CL:0000037!6.13e-16!172;CL:0000566!6.13e-16!172;CL:0002032!2.23e-15!165;CL:0000837!2.23e-15!165;CL:0000766!2.75e-15!76;CL:0002031!4.62e-15!124;CL:0002057!2.57e-14!42;CL:0000839!3.66e-14!70;CL:0000988!6.20e-14!182;CL:0000763!1.52e-13!112;CL:0000049!1.52e-13!112;CL:0002087!3.42e-13!119;CL:0000860!4.19e-13!45;CL:0000557!4.57e-13!71;CL:0002009!5.99e-12!65;CL:0002194!6.45e-12!63;CL:0000576!6.45e-12!63;CL:0000040!6.45e-12!63;CL:0000559!6.45e-12!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.77e-13;33!CL:0002057;2.77e-13;33!CL:0000576;3.27e-10;48!CL:0000473;8.85e-10;39!CL:0000234;8.85e-10;39!CL:0000766;8.16e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.73e-17,136;CL:0000037,2.32e-16,168;CL:0000766,3.42e-16,72;CL:0002032,8.37e-16,161;CL:0000837,8.37e-16,161;CL:0002031,1.29e-15,120;CL:0000839,4.48e-15,66;CL:0000988,9.29e-15,177;CL:0000860,2.57e-14,42;CL:0002057,2.57e-14,42;CL:0000763,4.24e-14,108;CL:0000049,4.24e-14,108;CL:0000557,6.74e-14,67;CL:0002087,1.06e-13,115;CL:0000473,6.66e-13,48;CL:0000234,6.66e-13,48;CL:0002009,8.87e-13,61;CL:0002194,9.06e-13,59;CL:0000576,9.06e-13,59;CL:0000040,9.06e-13,59;CL:0000559,9.06e-13,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.10e-10;42!UBERON:0006601;6.42e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-32!115;UBERON:0001049!5.26e-15!57;UBERON:0005068!5.26e-15!57;UBERON:0006241!5.26e-15!57;UBERON:0007135!5.26e-15!57;UBERON:0002390!1.33e-14!102;UBERON:0003061!1.33e-14!102;UBERON:0003080!9.25e-13!42;UBERON:0002193!1.31e-12!112;UBERON:0002780!1.68e-12!41;UBERON:0001890!1.68e-12!41;UBERON:0006240!1.68e-12!41;UBERON:0002616!7.72e-12!59;UBERON:0000073!4.05e-11!94;UBERON:0001016!4.05e-11!94;UBERON:0001474!5.90e-11!86;UBERON:0001017!6.48e-11!82;UBERON:0000955!1.63e-10!69;UBERON:0006238!1.63e-10!69;UBERON:0002371!3.29e-10!80;UBERON:0005743!3.82e-10!86;UBERON:0002020!1.68e-09!34;UBERON:0003528!1.68e-09!34;UBERON:0001893!6.26e-09!34;UBERON:0002791!8.01e-09!33;UBERON:0001869!2.57e-08!32;UBERON:0004765!2.60e-08!101;UBERON:0001434!2.60e-08!101;UBERON:0003075!2.09e-07!86;UBERON:0007284!2.09e-07!86;UBERON:0002346!3.51e-07!90;UBERON:0002619!7.14e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.39e-09;114!UBERON:0002780;2.39e-09;41!UBERON:0001890;2.39e-09;41!UBERON:0000073;1.85e-08;53!UBERON:0002616;1.85e-08;53!UBERON:0003528;4.09e-08;34!UBERON:0002020;4.09e-08;34!UBERON:0002791;5.46e-08;32!UBERON:0001869;1.19e-07;32!UBERON:0001893;1.33e-07;34!UBERON:0002619;6.84e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.71e-32,114;UBERON:0002390,2.98e-15,98;UBERON:0003061,2.98e-15,98;UBERON:0001049,9.67e-15,56;UBERON:0005068,9.67e-15,56;UBERON:0006241,9.67e-15,56;UBERON:0007135,9.67e-15,56;UBERON:0000073,1.87e-13,53;UBERON:0002616,1.87e-13,53;UBERON:0002193,3.99e-13,108;UBERON:0002780,1.68e-12,41;UBERON:0001890,1.68e-12,41;UBERON:0003080,1.68e-12,41;UBERON:0006240,1.68e-12,41;UBERON:0001016,1.20e-11,89;UBERON:0001474,1.54e-11,82;UBERON:0002371,8.62e-11,76;UBERON:0001017,1.12e-10,81;UBERON:0000955,2.85e-10,68;UBERON:0006238,2.85e-10,68;UBERON:0002405,1.23e-09,93;UBERON:0003528,1.68e-09,34;UBERON:0002020,1.68e-09,34;UBERON:0004765,5.93e-09,90;UBERON:0001893,6.26e-09,34;UBERON:0002791,1.13e-08,32;UBERON:0001869,2.57e-08,32;UBERON:0003075,4.11e-08,82;UBERON:0007284,4.11e-08,82;UBERON:0001434,6.48e-08,100;UBERON:0002346,7.56e-08,86;UBERON:0002619,7.14e-07,22 | |||
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| ||
|short_description=p1@N4BP2L2 | |||
}} | }} |
Latest revision as of 04:11, 17 September 2015
Short description: | p1@N4BP2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_N4BP2L2_5end |
Coexpression cluster: | C1025_Mast_lung_pineal_pituitary_cerebellum_Neutrophils_CD14 |
Association with transcript: | 0bp_to_ENST00000267068, ENST00000357505, ENST00000399396, ENST00000511143, NM_014887, NM_033111, uc001uuk.3, uc010abe.1, uc010tdz.1_5end |
EntrezGene: | N4BP2L2 |
HGNC: | 26916 |
UniProt: | Q92802B4DPY1Q9Y3H6Q6ZV26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.73e-17 | 136 |
hematopoietic stem cell | 2.32e-16 | 168 |
myeloid leukocyte | 3.42e-16 | 72 |
hematopoietic oligopotent progenitor cell | 8.37e-16 | 161 |
hematopoietic multipotent progenitor cell | 8.37e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 1.29e-15 | 120 |
myeloid lineage restricted progenitor cell | 4.48e-15 | 66 |
hematopoietic cell | 9.29e-15 | 177 |
classical monocyte | 2.57e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.57e-14 | 42 |
myeloid cell | 4.24e-14 | 108 |
common myeloid progenitor | 4.24e-14 | 108 |
granulocyte monocyte progenitor cell | 6.74e-14 | 67 |
nongranular leukocyte | 1.06e-13 | 115 |
defensive cell | 6.66e-13 | 48 |
phagocyte | 6.66e-13 | 48 |
macrophage dendritic cell progenitor | 8.87e-13 | 61 |
monopoietic cell | 9.06e-13 | 59 |
monocyte | 9.06e-13 | 59 |
monoblast | 9.06e-13 | 59 |
promonocyte | 9.06e-13 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.71e-32 | 114 |
hematopoietic system | 2.98e-15 | 98 |
blood island | 2.98e-15 | 98 |
neural tube | 9.67e-15 | 56 |
neural rod | 9.67e-15 | 56 |
future spinal cord | 9.67e-15 | 56 |
neural keel | 9.67e-15 | 56 |
regional part of nervous system | 1.87e-13 | 53 |
regional part of brain | 1.87e-13 | 53 |
hemolymphoid system | 3.99e-13 | 108 |
regional part of forebrain | 1.68e-12 | 41 |
forebrain | 1.68e-12 | 41 |
anterior neural tube | 1.68e-12 | 41 |
future forebrain | 1.68e-12 | 41 |
nervous system | 1.20e-11 | 89 |
bone element | 1.54e-11 | 82 |
bone marrow | 8.62e-11 | 76 |
central nervous system | 1.12e-10 | 81 |
brain | 2.85e-10 | 68 |
future brain | 2.85e-10 | 68 |
immune system | 1.23e-09 | 93 |
brain grey matter | 1.68e-09 | 34 |
gray matter | 1.68e-09 | 34 |
skeletal element | 5.93e-09 | 90 |
telencephalon | 6.26e-09 | 34 |
regional part of telencephalon | 1.13e-08 | 32 |
cerebral hemisphere | 2.57e-08 | 32 |
neural plate | 4.11e-08 | 82 |
presumptive neural plate | 4.11e-08 | 82 |
skeletal system | 6.48e-08 | 100 |
neurectoderm | 7.56e-08 | 86 |
regional part of cerebral cortex | 7.14e-07 | 22 |