FFCP PHASE1:Hg19::chr1:26633110..26633145,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91544 | |EntrezGene=91544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30600 | |HGNC=30600 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T124,C9J5Y4,B7Z1T8 | |UniProt=Q5T124,C9J5Y4,B7Z1T8 | ||
|association_with_transcript=0bp_to_ENST00000314675,ENST00000357089,ENST00000374221,ENST00000374223,ENST00000389235,ENST00000423664,ENST00000436301,ENST00000472155,ENST00000475591,ENST00000494942,ENST00000535108_5end | |association_with_transcript=0bp_to_ENST00000314675,ENST00000357089,ENST00000374221,ENST00000374223,ENST00000389235,ENST00000423664,ENST00000436301,ENST00000472155,ENST00000475591,ENST00000494942,ENST00000535108_5end | ||
|cluster_id=chr1:26633110..26633145,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_UBXN11_5end | |description=CAGE_peak_1_at_UBXN11_5end | ||
|id=chr1:26633110..26633145,- | |id=chr1:26633110..26633145,- | ||
|ontology_enrichment_celltype=CL:0000860!4.41e-29!45;CL:0002057!4.29e-28!42;CL:0002194!4.53e-26!63;CL:0000576!4.53e-26!63;CL:0000040!4.53e-26!63;CL:0000559!4.53e-26!63;CL:0002009!8.01e-26!65;CL:0000557!2.05e-24!71;CL:0000839!7.22e-24!70;CL:0002087!1.24e-23!119;CL:0000766!2.34e-22!76;CL:0002031!3.16e-21!124;CL:0000037!2.32e-20!172;CL:0000566!2.32e-20!172;CL:0000738!7.60e-20!140;CL:0002032!7.47e-19!165;CL:0000837!7.47e-19!165;CL:0000763!2.13e-18!112;CL:0000049!2.13e-18!112;CL:0000988!2.92e-18!182;CL:0002393!3.16e-07!9;CL:0002397!3.16e-07!9 | |ontology_enrichment_celltype=CL:0000860!4.41e-29!45;CL:0002057!4.29e-28!42;CL:0002194!4.53e-26!63;CL:0000576!4.53e-26!63;CL:0000040!4.53e-26!63;CL:0000559!4.53e-26!63;CL:0002009!8.01e-26!65;CL:0000557!2.05e-24!71;CL:0000839!7.22e-24!70;CL:0002087!1.24e-23!119;CL:0000766!2.34e-22!76;CL:0002031!3.16e-21!124;CL:0000037!2.32e-20!172;CL:0000566!2.32e-20!172;CL:0000738!7.60e-20!140;CL:0002032!7.47e-19!165;CL:0000837!7.47e-19!165;CL:0000763!2.13e-18!112;CL:0000049!2.13e-18!112;CL:0000988!2.92e-18!182;CL:0002393!3.16e-07!9;CL:0002397!3.16e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.34e-20;33!CL:0002057;2.34e-20;33!CL:0000473;7.64e-19;39!CL:0000234;7.64e-19;39!CL:0000576;1.14e-17;48!CL:0000766;1.41e-11;69!CL:0002087;5.87e-08;104!CL:0000763;1.10e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.66e-30,48;CL:0000234,4.66e-30,48;CL:0000860,4.29e-28,42;CL:0002057,4.29e-28,42;CL:0002194,2.71e-26,59;CL:0000576,2.71e-26,59;CL:0000040,2.71e-26,59;CL:0000559,2.71e-26,59;CL:0002009,5.26e-26,61;CL:0000557,1.78e-24,67;CL:0000839,6.33e-24,66;CL:0002087,2.20e-23,115;CL:0000766,2.57e-22,72;CL:0002031,6.03e-21,120;CL:0000037,5.34e-20,168;CL:0000738,1.59e-19,136;CL:0002032,1.69e-18,161;CL:0000837,1.69e-18,161;CL:0000988,2.46e-18,177;CL:0000763,3.97e-18,108;CL:0000049,3.97e-18,108;CL:0002393,3.16e-07,9;CL:0002397,3.16e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.26e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-21!102;UBERON:0003061!1.89e-21!102;UBERON:0002371!1.45e-19!80;UBERON:0001474!3.46e-17!86;UBERON:0002193!1.18e-16!112;UBERON:0001049!1.49e-13!57;UBERON:0005068!1.49e-13!57;UBERON:0006241!1.49e-13!57;UBERON:0007135!1.49e-13!57;UBERON:0002780!2.30e-12!41;UBERON:0001890!2.30e-12!41;UBERON:0006240!2.30e-12!41;UBERON:0004765!5.09e-12!101;UBERON:0001434!5.09e-12!101;UBERON:0002616!9.74e-12!59;UBERON:0007023!1.66e-11!115;UBERON:0003080!2.22e-11!42;UBERON:0002346!8.41e-11!90;UBERON:0000955!1.44e-10!69;UBERON:0006238!1.44e-10!69;UBERON:0001869!1.64e-10!32;UBERON:0003075!1.85e-10!86;UBERON:0007284!1.85e-10!86;UBERON:0001893!2.00e-10!34;UBERON:0002405!2.90e-10!115;UBERON:0005743!2.93e-10!86;UBERON:0002020!3.49e-10!34;UBERON:0003528!3.49e-10!34;UBERON:0001017!4.51e-10!82;UBERON:0002791!5.45e-10!33;UBERON:0000073!5.49e-09!94;UBERON:0001016!5.49e-09!94;UBERON:0002619!7.97e-09!22;UBERON:0003056!3.51e-08!61;UBERON:0000956!3.79e-08!25;UBERON:0000203!3.79e-08!25;UBERON:0001950!4.75e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.41e-09;32!UBERON:0001893;2.27e-09;34!UBERON:0002780;3.03e-09;41!UBERON:0001890;3.03e-09;41!UBERON:0000073;4.38e-09;53!UBERON:0002616;4.38e-09;53!UBERON:0002791;4.46e-09;32!UBERON:0003528;4.47e-09;34!UBERON:0002020;4.47e-09;34!UBERON:0002619;7.83e-09;22!UBERON:0000956;3.03e-08;25!UBERON:0000203;3.03e-08;25!UBERON:0001950;4.59e-08;20 | |||
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| ||
|short_description=p1@UBXN11 | |short_description=p1@UBXN11 | ||
}} | }} |
Latest revision as of 05:27, 17 September 2015
Short description: | p1@UBXN11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBXN11_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000314675, ENST00000357089, ENST00000374221, ENST00000374223, ENST00000389235, ENST00000423664, ENST00000436301, ENST00000472155, ENST00000475591, ENST00000494942, ENST00000535108_5end |
EntrezGene: | UBXN11 |
HGNC: | 30600 |
UniProt: | Q5T124C9J5Y4B7Z1T8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.66e-30 | 48 |
phagocyte | 4.66e-30 | 48 |
classical monocyte | 4.29e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.29e-28 | 42 |
monopoietic cell | 2.71e-26 | 59 |
monocyte | 2.71e-26 | 59 |
monoblast | 2.71e-26 | 59 |
promonocyte | 2.71e-26 | 59 |
macrophage dendritic cell progenitor | 5.26e-26 | 61 |
granulocyte monocyte progenitor cell | 1.78e-24 | 67 |
myeloid lineage restricted progenitor cell | 6.33e-24 | 66 |
nongranular leukocyte | 2.20e-23 | 115 |
myeloid leukocyte | 2.57e-22 | 72 |
hematopoietic lineage restricted progenitor cell | 6.03e-21 | 120 |
hematopoietic stem cell | 5.34e-20 | 168 |
leukocyte | 1.59e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.69e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-18 | 161 |
hematopoietic cell | 2.46e-18 | 177 |
myeloid cell | 3.97e-18 | 108 |
common myeloid progenitor | 3.97e-18 | 108 |
intermediate monocyte | 3.16e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.06e-21 | 98 |
blood island | 3.06e-21 | 98 |
bone marrow | 1.95e-19 | 76 |
bone element | 5.50e-17 | 82 |
hemolymphoid system | 2.27e-16 | 108 |
regional part of nervous system | 8.74e-15 | 53 |
regional part of brain | 8.74e-15 | 53 |
neural tube | 1.79e-14 | 56 |
neural rod | 1.79e-14 | 56 |
future spinal cord | 1.79e-14 | 56 |
neural keel | 1.79e-14 | 56 |
immune system | 2.12e-13 | 93 |
regional part of forebrain | 2.30e-12 | 41 |
forebrain | 2.30e-12 | 41 |
anterior neural tube | 2.30e-12 | 41 |
future forebrain | 2.30e-12 | 41 |
skeletal element | 2.56e-12 | 90 |
brain | 2.93e-11 | 68 |
future brain | 2.93e-11 | 68 |
adult organism | 3.33e-11 | 114 |
skeletal system | 9.05e-11 | 100 |
central nervous system | 1.11e-10 | 81 |
cerebral hemisphere | 1.64e-10 | 32 |
telencephalon | 2.00e-10 | 34 |
brain grey matter | 3.49e-10 | 34 |
gray matter | 3.49e-10 | 34 |
neurectoderm | 3.93e-10 | 86 |
neural plate | 8.57e-10 | 82 |
presumptive neural plate | 8.57e-10 | 82 |
regional part of telencephalon | 9.58e-10 | 32 |
nervous system | 2.66e-09 | 89 |
regional part of cerebral cortex | 7.97e-09 | 22 |
pre-chordal neural plate | 1.25e-08 | 61 |
cerebral cortex | 3.79e-08 | 25 |
pallium | 3.79e-08 | 25 |
neocortex | 4.75e-08 | 20 |