FFCP PHASE1:Hg19::chr8:21882244..21882260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10361 | |EntrezGene=10361 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7930 | |HGNC=7930 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000520180_5end | |association_with_transcript=-10bp_to_ENST00000520180_5end | ||
|cluster_id=chr8:21882244..21882260,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_7_at_NPM2_5end | |description=CAGE_peak_7_at_NPM2_5end | ||
|id=chr8:21882244..21882260,+ | |id=chr8:21882244..21882260,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.33e-118;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;8.14e-60;6!UBERON:0002680;2.91e-40;9!UBERON:0001895;2.91e-40;9!UBERON:0004733;1.81e-30;12!UBERON:0002028;1.81e-30;12!UBERON:0004732;3.33e-28;13!UBERON:0001905;6.30e-21;2!UBERON:0002757;6.30e-21;2!UBERON:0010134;6.30e-21;2!UBERON:0005408;6.30e-21;2!UBERON:0001899;6.30e-21;2!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0002784;3.60e-11;4!UBERON:0000073;1.86e-08;53!UBERON:0002616;1.86e-08;53!UBERON:0000955;3.62e-07;68!UBERON:0001894;6.21e-07;7 | |||
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|short_description=p7@NPM2 | |short_description=p7@NPM2 | ||
}} | }} |
Latest revision as of 09:31, 17 September 2015
Short description: | p7@NPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NPM2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -10bp_to_ENST00000520180_5end |
EntrezGene: | NPM2 |
HGNC: | 7930 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.15e-60 | 6 |
rhombic lip | 8.15e-60 | 6 |
regional part of metencephalon | 2.91e-40 | 9 |
metencephalon | 2.91e-40 | 9 |
future metencephalon | 2.91e-40 | 9 |
segmental subdivision of hindbrain | 1.81e-30 | 12 |
hindbrain | 1.81e-30 | 12 |
presumptive hindbrain | 1.81e-30 | 12 |
segmental subdivision of nervous system | 3.33e-28 | 13 |
posterior neural tube | 1.40e-24 | 15 |
chordal neural plate | 1.40e-24 | 15 |
pineal body | 5.70e-21 | 2 |
regional part of epithalamus | 5.70e-21 | 2 |
secretory circumventricular organ | 5.70e-21 | 2 |
circumventricular organ | 5.70e-21 | 2 |
epithalamus | 5.70e-21 | 2 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
gland of diencephalon | 3.42e-11 | 4 |
neuroendocrine gland | 3.42e-11 | 4 |
regional part of diencephalon | 3.42e-11 | 4 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
central nervous system | 2.54e-08 | 81 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
neurectoderm | 5.76e-08 | 86 |
nervous system | 1.45e-07 | 89 |
diencephalon | 6.04e-07 | 7 |
future diencephalon | 6.04e-07 | 7 |