FFCP PHASE1:Hg19::chr1:32042764..32042776,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:32042764..32042776,+ to FFCP PHASE1:Hg19::chr1:32042764..32042776,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64129 | |EntrezGene=64129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19168 | |HGNC=19168 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=129bp_to_ENST00000481165_5end | |||
|cluster_id=chr1:32042764..32042776,+ | |||
|description=CAGE_peak_6_at_TINAGL1_5end | |||
|id=chr1:32042764..32042776,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.23e-24!254;CL:0000213!4.52e-18!57;CL:0000215!4.52e-18!57;CL:0000076!6.15e-18!62;CL:0000115!3.64e-14!35;CL:0002139!5.91e-14!24;CL:0002078!7.32e-13!44;CL:1000497!6.58e-12!18;CL:0002518!6.58e-12!18;CL:0000071!1.59e-11!18;CL:0002546!1.59e-11!18;CL:0000220!3.21e-11!246;CL:0002321!6.25e-11!248;CL:1000449!4.84e-10!16;CL:1000612!4.21e-09!7;CL:1000746!4.21e-09!7;CL:0002076!1.45e-08!43;CL:0000222!3.83e-08!119;CL:1000413!7.64e-08!9;CL:0002681!9.41e-08!13;CL:0002584!9.41e-08!13;CL:0000223!2.41e-07!59;CL:0000077!5.49e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:1000746;4.00e-32;7!CL:1000612;4.00e-32;7!CL:1000449;1.12e-25;15!CL:1000497;1.58e-22;17!CL:0002518;1.58e-22;17!CL:0002188;6.95e-21;5!CL:0002681;1.50e-18;12!CL:0002584;1.50e-18;12!CL:0000650;2.70e-13;2!CL:1000500;2.70e-13;2!CL:1000618;2.70e-13;2!CL:1001318;2.70e-13;2!CL:0002173;2.70e-13;2!CL:0000115;5.09e-11;36!CL:1000507;4.80e-10;10!CL:1000494;4.80e-10;10!CL:0002541;8.73e-10;3!CL:0000313;1.74e-07;1!CL:0000669;4.47e-07;4!CL:0002078;5.11e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,5.58e-32,7;CL:1000612,5.58e-32,7;CL:1000449,1.24e-25,15;CL:1000497,1.73e-22,17;CL:0002518,1.73e-22,17;CL:0002188,5.99e-21,5;CL:0002681,1.82e-18,12;CL:0002584,1.82e-18,12;CL:0000650,4.75e-13,2;CL:1000500,4.75e-13,2;CL:1000618,4.75e-13,2;CL:1001318,4.75e-13,2;CL:0002173,4.75e-13,2;CL:0000115,4.87e-13,36;CL:0002078,3.90e-10,45;CL:1000507,5.56e-10,10;CL:1000494,5.56e-10,10;CL:0002541,8.75e-10,3;CL:0000213,2.36e-09,58;CL:0000215,2.36e-09,58;CL:0000313,2.80e-07,1;CL:0000669,5.90e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.56e-08;1!UBERON:0008801;1.74e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001008!6.90e-12!45;UBERON:0003887!1.02e-11!21;UBERON:0001986!1.59e-11!18;UBERON:0004638!1.59e-11!18;UBERON:0004852!1.59e-11!18;UBERON:0003103!1.76e-11!69;UBERON:0003914!2.09e-11!118;UBERON:0000080!2.19e-11!18;UBERON:0002120!2.19e-11!18;UBERON:0004875!2.19e-11!18;UBERON:0005721!2.19e-11!18;UBERON:0005754!2.19e-11!18;UBERON:0007297!2.19e-11!18;UBERON:0006554!3.34e-11!44;UBERON:0000477!6.63e-11!286;UBERON:0000489!9.76e-11!32;UBERON:0006555!1.11e-10!17;UBERON:0005103!1.11e-10!17;UBERON:0000083!1.11e-10!17;UBERON:0009201!1.11e-10!17;UBERON:0004819!1.11e-10!17;UBERON:0006553!1.11e-10!17;UBERON:0003074!1.11e-10!17;UBERON:0003060!1.11e-10!17;UBERON:0003064!2.46e-10!37;UBERON:0002113!3.07e-10!27;UBERON:0003918!3.07e-10!27;UBERON:0005095!3.07e-10!27;UBERON:0007687!3.07e-10!27;UBERON:0004211!4.84e-10!16;UBERON:0001285!4.84e-10!16;UBERON:0007684!4.84e-10!16;UBERON:0003220!4.84e-10!16;UBERON:0004208!4.84e-10!16;UBERON:0004876!9.64e-10!20;UBERON:0004111!1.25e-09!241;UBERON:0002049!1.64e-09!79;UBERON:0007798!1.64e-09!79;UBERON:0000074!4.21e-09!7;UBERON:0001229!4.21e-09!7;UBERON:0001230!4.21e-09!7;UBERON:0005749!4.21e-09!7;UBERON:0004199!4.21e-09!7;UBERON:0004209!4.21e-09!7;UBERON:0004198!4.21e-09!7;UBERON:0005177!5.27e-09!107;UBERON:0009569!8.61e-09!113;UBERON:0000487!1.60e-08!22;UBERON:0000464!1.94e-08!104;UBERON:0000058!2.85e-08!26;UBERON:0000055!3.23e-08!69;UBERON:0000466!6.03e-08!126;UBERON:0005172!6.48e-08!55;UBERON:0005173!6.48e-08!55;UBERON:0003915!7.64e-08!9;UBERON:0004700!7.64e-08!9;UBERON:0001917!7.64e-08!9;UBERON:0001225!9.41e-08!13;UBERON:0008987!9.41e-08!13;UBERON:0000467!2.46e-07!625;UBERON:0000480!2.96e-07!626;UBERON:0001009!3.80e-07!113;UBERON:0001981!4.19e-07!60;UBERON:0007500!4.19e-07!60;UBERON:0004537!4.19e-07!60;UBERON:0006965!4.19e-07!60;UBERON:0001851!4.56e-07!16;UBERON:0006914!6.10e-07!25;UBERON:0002553!6.59e-07!70;UBERON:0002417!6.97e-07!61;UBERON:0000916!6.97e-07!61;UBERON:0004119!9.43e-07!169;UBERON:0000925!9.43e-07!169;UBERON:0006595!9.43e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;4.00e-32;7!UBERON:0001229;4.00e-32;7!UBERON:0006555;1.12e-25;15!UBERON:0004819;1.12e-25;15!UBERON:0001285;1.12e-25;15!UBERON:0007684;1.12e-25;15!UBERON:0000353;4.67e-20;15!UBERON:0001225;1.50e-18;12!UBERON:0008987;1.50e-18;12!UBERON:0002113;1.26e-15;24!UBERON:0011143;1.26e-15;24!UBERON:0006554;1.77e-15;30!UBERON:0001008;1.77e-15;30!UBERON:0001851;9.75e-15;15!UBERON:0003567;2.70e-13;2!UBERON:0003838;2.70e-13;2!UBERON:0003586;2.70e-13;2!UBERON:0005169;2.70e-13;2!UBERON:0002321;2.70e-13;2!UBERON:0005215;2.70e-13;2!UBERON:0002303;2.70e-13;2!UBERON:0002319;2.70e-13;2!UBERON:0000489;9.81e-13;29!UBERON:0004211;4.80e-10;10!UBERON:0009773;4.80e-10;10!UBERON:0001231;4.80e-10;10!UBERON:0004810;4.80e-10;10!UBERON:0003124;8.73e-10;3!UBERON:0000920;8.73e-10;3!UBERON:0005795;1.74e-07;1!UBERON:0001831;1.74e-07;1!UBERON:0004911;1.74e-07;1!UBERON:0001567;1.74e-07;1!UBERON:0003891;4.47e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,5.58e-32,7;UBERON:0000074,5.58e-32,7;UBERON:0001229,5.58e-32,7;UBERON:0001230,5.58e-32,7;UBERON:0003220,5.58e-32,7;UBERON:0005749,5.58e-32,7;UBERON:0004199,5.58e-32,7;UBERON:0004209,5.58e-32,7;UBERON:0004198,5.58e-32,7;UBERON:0005103,6.25e-28,8;UBERON:0000083,6.25e-28,8;UBERON:0009201,6.25e-28,8;UBERON:0006553,6.25e-28,8;UBERON:0003074,6.25e-28,8;UBERON:0003060,6.25e-28,8;UBERON:0004211,1.24e-25,15;UBERON:0009773,1.24e-25,15;UBERON:0001231,1.24e-25,15;UBERON:0001285,1.24e-25,15;UBERON:0007684,1.24e-25,15;UBERON:0004208,1.24e-25,15;UBERON:0000080,8.87e-25,9;UBERON:0002120,8.87e-25,9;UBERON:0004875,8.87e-25,9;UBERON:0005721,8.87e-25,9;UBERON:0005754,8.87e-25,9;UBERON:0007297,8.87e-25,9;UBERON:0006555,5.81e-24,16;UBERON:0004819,5.81e-24,16;UBERON:0004876,3.45e-20,11;UBERON:0000353,5.58e-20,15;UBERON:0001225,1.82e-18,12;UBERON:0008987,1.82e-18,12;UBERON:0003887,1.82e-18,12;UBERON:0000058,1.34e-15,19;UBERON:0001851,1.13e-14,15;UBERON:0002113,2.60e-14,26;UBERON:0003918,2.60e-14,26;UBERON:0011143,2.60e-14,26;UBERON:0005095,2.60e-14,26;UBERON:0007687,2.60e-14,26;UBERON:0003567,4.75e-13,2;UBERON:0003838,4.75e-13,2;UBERON:0003586,4.75e-13,2;UBERON:0005169,4.75e-13,2;UBERON:0002321,4.75e-13,2;UBERON:0005215,4.75e-13,2;UBERON:0002303,4.75e-13,2;UBERON:0002319,4.75e-13,2;UBERON:0000489,8.10e-12,31;UBERON:0006554,1.24e-11,47;UBERON:0001008,2.35e-11,48;UBERON:0003064,2.70e-10,28;UBERON:0004810,5.56e-10,10;UBERON:0000920,8.75e-10,3;UBERON:0003914,4.29e-09,117;UBERON:0009569,3.11e-08,112;UBERON:0005172,4.96e-08,54;UBERON:0005173,4.96e-08,54;UBERON:0003103,1.60e-07,68;UBERON:0004911,2.80e-07,1;UBERON:0001831,2.98e-07,1;UBERON:0001567,2.98e-07,1;UBERON:0008801,2.98e-07,1;UBERON:0002417,4.37e-07,60;UBERON:0000916,4.37e-07,60;UBERON:0003891,5.90e-07,4;UBERON:0002553,8.63e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.79120467188971,0,0.527533956456907,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,2.47606237746061,0.835979866147242,0.258416759169329,0.35576626268671,0,1.61131726843659,0,0.488124115096339,0.735326160691737,2.43042584364528,0.446498641420399,0.673588117878509,0.337834441449967,1.53316637465883,0,0.366403487860815,0,0,0.436094052142534,0,0.379891534993739,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0.37223371266318,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,4.42893272774789,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0.433099343283221,0.462985512576611,0.380508304469197,0,0,0,0,0,0.93733833986777,0.335964256397719,0.425325291727159,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.362578348774867,3.80962293576241,0.276242966807689,0,0,0,0,0.15403067420883,1.56869953835371,1.46139224653261,0.105551628892876,3.4120015221269,2.2112181685947,0.647747748306418,1.54227252690289,1.08378575017541,1.50506932156456,0.509752546090077,0,0.671624264166535,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,1.31535265576129,0,0,0.608731130888112,0,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,2.17781969722645,0.0941438007767792,0,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0.296964680832639,0,0,0,0.333926115068718,0,0,1.79323189425963,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,1.44999915086959,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0.179515288819544,0.108647371922008,0.31900115973192,2.47313502185028,4.26427820814908,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,1.19472429772959,0,0,0.347119476670262,0.293977192243133,0.522355239482415,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0.160317640503067,0.85381197895741,0.19980960958213,0.288180834308212,0,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0,0,0,0,0.279282401272254,0.229160424011684,0,0.998395002494955,1.71690419254628,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0.383830394638891,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0.249960815924213,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0,0.796191777397232,0,0,0,0,0,0.643324774124777,0,0.906823702049089,2.31522474323834,0.244736704506468,0.358177682162975,0.617602894321944,0.219284049578707,0,0.578742114812744,0.337884881306145,0,0.690860683462397,0,0,0,0,0,0,0.983091635014877,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,1.28400018965175,0.462102664601353,0,0.690359926060101,0,0,0,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,1.09651553371436,0,0,0.127762427639595,0,0,0,0,0.532214220975833,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0.913158720509496,0.863710364874486,0.9555033757741,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,1.11855431797792,0.196300467230486,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0.375935671919414,0.257831551894309,0,0,0.705789743431384,0,0,0.458729283404541,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,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| 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| ||
|short_description=p6@TINAGL1 | |||
}} | }} |
Latest revision as of 13:35, 17 September 2015
Short description: | p6@TINAGL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TINAGL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 129bp_to_ENST00000481165_5end |
EntrezGene: | TINAGL1 |
HGNC: | 19168 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 5.58e-32 | 7 |
kidney corpuscule cell | 5.58e-32 | 7 |
epithelial cell of nephron | 1.24e-25 | 15 |
kidney cell | 1.73e-22 | 17 |
kidney epithelial cell | 1.73e-22 | 17 |
glomerular endothelial cell | 5.99e-21 | 5 |
kidney cortical cell | 1.82e-18 | 12 |
renal cortical epithelial cell | 1.82e-18 | 12 |
mesangial cell | 4.75e-13 | 2 |
kidney interstitial cell | 4.75e-13 | 2 |
juxtaglomerular complex cell | 4.75e-13 | 2 |
renal interstitial pericyte | 4.75e-13 | 2 |
extraglomerular mesangial cell | 4.75e-13 | 2 |
endothelial cell | 4.87e-13 | 36 |
meso-epithelial cell | 3.90e-10 | 45 |
kidney tubule cell | 5.56e-10 | 10 |
nephron tubule epithelial cell | 5.56e-10 | 10 |
chorionic membrane mesenchymal stem cell | 8.75e-10 | 3 |
lining cell | 2.36e-09 | 58 |
barrier cell | 2.36e-09 | 58 |
serous secreting cell | 2.80e-07 | 1 |
pericyte cell | 5.90e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.80e-07 | 1 |