FFCP PHASE1:Hg19::chr6:2970955..2970959,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5269 | |EntrezGene=5269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8950 | |HGNC=8950 | ||
|TSSclassifier=strong | |||
|UniProt=P35237 | |UniProt=P35237 | ||
|association_with_transcript=17bp_to_BX538343_5end | |association_with_transcript=17bp_to_BX538343_5end | ||
|cluster_id=chr6:2970955..2970959,- | |||
|description=CAGE_peak_10_at_SERPINB6_5end | |description=CAGE_peak_10_at_SERPINB6_5end | ||
|id=chr6:2970955..2970959,- | |id=chr6:2970955..2970959,- | ||
|ontology_enrichment_celltype=CL:0000860;1.08e-10;33!CL:0002057;1.08e-10;33!CL:0000473;5.99e-10;39!CL:0000234;5.99e-10;39!CL:0000576;7.00e-08;48!CL:0000766;5.63e-07;69 | |ontology_enrichment_celltype=CL:0000839!2.26e-13!70;CL:0000557!4.82e-13!71;CL:0000860!1.26e-12!45;CL:0002194!2.70e-12!63;CL:0000576!2.70e-12!63;CL:0000040!2.70e-12!63;CL:0000559!2.70e-12!63;CL:0000766!3.07e-12!76;CL:0002057!2.01e-11!42;CL:0002009!2.35e-11!65;CL:0000763!2.38e-08!112;CL:0000049!2.38e-08!112 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.08e-10;33!CL:0002057;1.08e-10;33!CL:0000473;5.99e-10;39!CL:0000234;5.99e-10;39!CL:0000576;7.00e-08;48!CL:0000766;5.63e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,3.41e-16,66;CL:0000557,9.63e-16,67;CL:0000766,1.44e-14,72;CL:0002194,1.41e-13,59;CL:0000576,1.41e-13,59;CL:0000040,1.41e-13,59;CL:0000559,1.41e-13,59;CL:0000473,4.43e-13,48;CL:0000234,4.43e-13,48;CL:0000860,5.89e-13,42;CL:0002057,5.89e-13,42;CL:0002009,9.62e-13,61;CL:0000763,3.55e-10,108;CL:0000049,3.55e-10,108;CL:0002031,7.69e-10,120;CL:0002087,4.21e-08,115;CL:0000738,6.58e-08,136;CL:0000988,1.29e-07,177;CL:0002032,1.44e-07,161;CL:0000837,1.44e-07,161;CL:0000037,5.17e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;4.95e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002780;1.73e-09;41!UBERON:0001890;1.73e-09;41!UBERON:0000073;1.01e-08;53!UBERON:0002616;1.01e-08;53!UBERON:0001893;8.53e-08;34!UBERON:0003528;1.61e-07;34!UBERON:0002020;1.61e-07;34!UBERON:0002791;2.62e-07;32!UBERON:0001869;5.52e-07;32 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.89e-14!115;UBERON:0002390!7.32e-11!102;UBERON:0003061!7.32e-11!102;UBERON:0001474!1.06e-10!86;UBERON:0002371!4.54e-10!80;UBERON:0002193!8.27e-10!112;UBERON:0001049!4.92e-09!57;UBERON:0005068!4.92e-09!57;UBERON:0006241!4.92e-09!57;UBERON:0007135!4.92e-09!57;UBERON:0004765!1.21e-08!101;UBERON:0001434!1.21e-08!101;UBERON:0002780!3.12e-08!41;UBERON:0001890!3.12e-08!41;UBERON:0006240!3.12e-08!41;UBERON:0003080!1.24e-07!42;UBERON:0002616!3.84e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.73e-09;41!UBERON:0001890;1.73e-09;41!UBERON:0000073;1.01e-08;53!UBERON:0002616;1.01e-08;53!UBERON:0001893;8.53e-08;34!UBERON:0003528;1.61e-07;34!UBERON:0002020;1.61e-07;34!UBERON:0002791;2.62e-07;32!UBERON:0001869;5.52e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.34e-18,114;UBERON:0001049,4.11e-14,56;UBERON:0005068,4.11e-14,56;UBERON:0006241,4.11e-14,56;UBERON:0007135,4.11e-14,56;UBERON:0002390,2.00e-13,98;UBERON:0003061,2.00e-13,98;UBERON:0000073,2.32e-13,53;UBERON:0002616,2.32e-13,53;UBERON:0001474,4.84e-13,82;UBERON:0002371,6.32e-13,76;UBERON:0002193,3.25e-12,108;UBERON:0002780,6.64e-12,41;UBERON:0001890,6.64e-12,41;UBERON:0003080,6.64e-12,41;UBERON:0006240,6.64e-12,41;UBERON:0002405,6.19e-11,93;UBERON:0004765,1.18e-10,90;UBERON:0000955,1.18e-10,68;UBERON:0006238,1.18e-10,68;UBERON:0003075,1.62e-10,82;UBERON:0007284,1.62e-10,82;UBERON:0002346,1.88e-09,86;UBERON:0001017,2.22e-09,81;UBERON:0001434,2.47e-09,100;UBERON:0001893,3.06e-09,34;UBERON:0003528,3.28e-09,34;UBERON:0002020,3.28e-09,34;UBERON:0001016,3.81e-09,89;UBERON:0002791,5.50e-08,32;UBERON:0001869,8.77e-08,32;UBERON:0003056,3.12e-07,61 | |||
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| ||
|short_description=p10@SERPINB6 | |short_description=p10@SERPINB6 | ||
}} | }} |
Latest revision as of 14:27, 17 September 2015
Short description: | p10@SERPINB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SERPINB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_BX538343_5end |
EntrezGene: | SERPINB6 |
HGNC: | 8950 |
UniProt: | P35237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 3.41e-16 | 66 |
granulocyte monocyte progenitor cell | 9.63e-16 | 67 |
myeloid leukocyte | 1.44e-14 | 72 |
monopoietic cell | 1.41e-13 | 59 |
monocyte | 1.41e-13 | 59 |
monoblast | 1.41e-13 | 59 |
promonocyte | 1.41e-13 | 59 |
defensive cell | 4.43e-13 | 48 |
phagocyte | 4.43e-13 | 48 |
classical monocyte | 5.89e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.89e-13 | 42 |
macrophage dendritic cell progenitor | 9.62e-13 | 61 |
myeloid cell | 3.55e-10 | 108 |
common myeloid progenitor | 3.55e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 7.69e-10 | 120 |
nongranular leukocyte | 4.21e-08 | 115 |
leukocyte | 6.58e-08 | 136 |
hematopoietic cell | 1.29e-07 | 177 |
hematopoietic oligopotent progenitor cell | 1.44e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-07 | 161 |
hematopoietic stem cell | 5.17e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.34e-18 | 114 |
neural tube | 4.11e-14 | 56 |
neural rod | 4.11e-14 | 56 |
future spinal cord | 4.11e-14 | 56 |
neural keel | 4.11e-14 | 56 |
hematopoietic system | 2.00e-13 | 98 |
blood island | 2.00e-13 | 98 |
regional part of nervous system | 2.32e-13 | 53 |
regional part of brain | 2.32e-13 | 53 |
bone element | 4.84e-13 | 82 |
bone marrow | 6.32e-13 | 76 |
hemolymphoid system | 3.25e-12 | 108 |
regional part of forebrain | 6.64e-12 | 41 |
forebrain | 6.64e-12 | 41 |
anterior neural tube | 6.64e-12 | 41 |
future forebrain | 6.64e-12 | 41 |
immune system | 6.19e-11 | 93 |
skeletal element | 1.18e-10 | 90 |
brain | 1.18e-10 | 68 |
future brain | 1.18e-10 | 68 |
neural plate | 1.62e-10 | 82 |
presumptive neural plate | 1.62e-10 | 82 |
neurectoderm | 1.88e-09 | 86 |
central nervous system | 2.22e-09 | 81 |
skeletal system | 2.47e-09 | 100 |
telencephalon | 3.06e-09 | 34 |
brain grey matter | 3.28e-09 | 34 |
gray matter | 3.28e-09 | 34 |
nervous system | 3.81e-09 | 89 |
regional part of telencephalon | 5.50e-08 | 32 |
cerebral hemisphere | 8.77e-08 | 32 |
pre-chordal neural plate | 3.12e-07 | 61 |