FFCP PHASE1:Hg19::chr11:31825214..31825226,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:31825214..31825226,- to FFCP PHASE1:Hg19::chr11:31825214..31825226,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000530714_5end | |||
|cluster_id=chr11:31825214..31825226,- | |||
|description=CAGE_peak_14_at_PAX6_5end | |||
|id=chr11:31825214..31825226,- | |||
|ontology_enrichment_celltype=CL:0000128!1.91e-17!7;CL:0000126!1.91e-17!7;CL:0000127!1.91e-17!7;CL:0002453!1.91e-17!7;CL:0000064!4.34e-12!3;CL:0005012!4.34e-12!3;CL:0000067!4.34e-12!3;CL:0002304!4.34e-12!3;CL:0002605!1.12e-11!3;CL:0002319!5.21e-11!25;CL:0002603!1.59e-10!3;CL:0000306!2.64e-09!4;CL:0002222!2.64e-09!4;CL:0002224!2.64e-09!4;CL:0000243!5.18e-09!15;CL:0000125!5.18e-09!15;CL:0000030!5.18e-09!15;CL:0000339!5.18e-09!15;CL:0000133!3.95e-08!59;CL:0000095!5.82e-08!17;CL:0000123!5.82e-08!17 | |||
|ontology_enrichment_celltype_v019=CL:0000306;2.25e-24;4!CL:0002222;2.25e-24;4!CL:0002224;2.25e-24;4!CL:0000064;3.00e-15;3!CL:0000067;3.00e-15;3!CL:0005012;3.00e-15;3!CL:0002304;3.00e-15;3!CL:0000342;1.07e-11;1!CL:0002565;1.07e-11;1!CL:0000075;9.37e-10;27!CL:0002535;9.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.08e-24,4;CL:0002222,2.08e-24,4;CL:0002224,2.08e-24,4;CL:0000064,2.80e-15,3;CL:0000067,2.80e-15,3;CL:0005012,2.80e-15,3;CL:0002304,2.80e-15,3;CL:0000342,7.76e-12,1;CL:0002565,7.76e-12,1;CL:0000075,9.03e-10,27;CL:0002535,9.96e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.05e-32;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007625;4.05e-34;11!UBERON:0001801;9.32e-27;14!UBERON:0000019;1.85e-26;19!UBERON:0000047;1.85e-26;19!UBERON:0004088;1.85e-26;19!UBERON:0010230;1.85e-26;19!UBERON:0000970;4.15e-25;20!UBERON:0010077;2.25e-24;4!UBERON:0005389;2.25e-24;4!UBERON:0000488;2.25e-24;4!UBERON:0000484;2.25e-24;4!UBERON:0000965;2.25e-24;4!UBERON:0001803;2.25e-24;4!UBERON:0002104;6.92e-24;21!UBERON:0001456;6.92e-24;21!UBERON:0000020;9.25e-22;23!UBERON:0001032;7.89e-21;24!UBERON:0004456;7.89e-21;24!UBERON:0002037;1.50e-16;6!UBERON:0002203;1.80e-16;6!UBERON:0001768;1.80e-16;6!UBERON:0002200;1.80e-16;6!UBERON:0001778;3.00e-15;3!UBERON:0001775;3.00e-15;3!UBERON:0010371;5.98e-12;31!UBERON:0002506;1.07e-11;1!UBERON:0001769;1.07e-11;1!UBERON:0002680;3.15e-11;9!UBERON:0001895;3.15e-11;9!UBERON:0006876;3.06e-09;11!UBERON:0000349;3.17e-09;5!UBERON:0004733;1.50e-08;12!UBERON:0002028;1.50e-08;12!UBERON:0001444;2.59e-08;48!UBERON:0004732;6.25e-08;13!UBERON:0000033;5.97e-07;50!UBERON:0001871;7.86e-07;6!UBERON:0000073;9.25e-07;53!UBERON:0002616;9.25e-07;53!UBERON:0006955;9.69e-07;2!UBERON:0004801;9.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,3.05e-34,11;UBERON:0001801,7.46e-27,14;UBERON:0000019,3.22e-25,20;UBERON:0000047,3.22e-25,20;UBERON:0010312,3.22e-25,20;UBERON:0004088,3.22e-25,20;UBERON:0010230,3.22e-25,20;UBERON:0003072,3.22e-25,20;UBERON:0004128,3.22e-25,20;UBERON:0003071,3.22e-25,20;UBERON:0000488,1.64e-24,4;UBERON:0010077,2.08e-24,4;UBERON:0005389,2.08e-24,4;UBERON:0000484,2.08e-24,4;UBERON:0002546,2.08e-24,4;UBERON:0000965,2.08e-24,4;UBERON:0001803,2.08e-24,4;UBERON:0003073,2.08e-24,4;UBERON:0005426,2.08e-24,4;UBERON:0000970,5.43e-24,21;UBERON:0002104,5.43e-24,21;UBERON:0001456,7.10e-23,22;UBERON:0003075,1.26e-22,82;UBERON:0007284,1.26e-22,82;UBERON:0002346,1.70e-21,86;UBERON:0000020,6.39e-21,24;UBERON:0001032,6.39e-21,24;UBERON:0004456,6.39e-21,24;UBERON:0003056,8.99e-19,61;UBERON:0010371,1.83e-17,104;UBERON:0002203,1.46e-16,6;UBERON:0001768,1.46e-16,6;UBERON:0002200,1.46e-16,6;UBERON:0002037,1.71e-16,6;UBERON:0006215,1.71e-16,6;UBERON:0005085,4.64e-16,31;UBERON:0001778,2.80e-15,3;UBERON:0001775,2.80e-15,3;UBERON:0010314,2.36e-13,132;UBERON:0000076,1.61e-12,8;UBERON:0002506,7.76e-12,1;UBERON:0001769,7.76e-12,1;UBERON:0004121,2.44e-11,171;UBERON:0000924,2.44e-11,171;UBERON:0006601,2.44e-11,171;UBERON:0002680,3.43e-11,9;UBERON:0001895,3.43e-11,9;UBERON:0010092,3.43e-11,9;UBERON:0001444,6.42e-10,49;UBERON:0006876,2.74e-09,11;UBERON:0000349,4.41e-09,5;UBERON:0000073,9.38e-09,53;UBERON:0002616,9.38e-09,53;UBERON:0000033,1.36e-08,56;UBERON:0004733,1.60e-08,12;UBERON:0002028,1.60e-08,12;UBERON:0007277,1.60e-08,12;UBERON:0001049,2.94e-08,56;UBERON:0005068,2.94e-08,56;UBERON:0006241,2.94e-08,56;UBERON:0007135,2.94e-08,56;UBERON:0004732,6.63e-08,13;UBERON:0000153,1.08e-07,62;UBERON:0007811,1.08e-07,62;UBERON:0001017,4.34e-07,81;UBERON:0003076,6.50e-07,15;UBERON:0003057,6.50e-07,15;UBERON:0001871,9.65e-07,6;UBERON:0006955,9.96e-07,2;UBERON:0004801,9.96e-07,2 | |||
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| ||
|short_description=p14@PAX6 | |||
}} | }} |
Latest revision as of 14:47, 17 September 2015
Short description: | p14@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PAX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530714_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.08e-24 | 4 |
vertebrate lens cell | 2.08e-24 | 4 |
lens epithelial cell | 2.08e-24 | 4 |
ciliated cell | 2.80e-15 | 3 |
ciliated epithelial cell | 2.80e-15 | 3 |
multi-ciliated epithelial cell | 2.80e-15 | 3 |
non-pigmented ciliary epithelial cell | 2.80e-15 | 3 |
pigment cell (sensu Vertebrata) | 7.76e-12 | 1 |
iris pigment epithelial cell | 7.76e-12 | 1 |
columnar/cuboidal epithelial cell | 9.03e-10 | 27 |
epithelial cell of cervix | 9.96e-07 | 2 |