FFCP PHASE1:Hg19::chr19:36606078..36606128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5438 | |EntrezGene=5438 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9196 | |HGNC=9196 | ||
|TSSclassifier=strong | |||
|UniProt=P36954 | |UniProt=P36954 | ||
|association_with_transcript=77bp_to_ENST00000221859,NM_006233,uc002ode.2,uc002odf.2_5end | |association_with_transcript=77bp_to_ENST00000221859,NM_006233,uc002ode.2,uc002odf.2_5end | ||
|cluster_id=chr19:36606078..36606128,- | |||
|description=CAGE_peak_2_at_POLR2I_5end | |description=CAGE_peak_2_at_POLR2I_5end | ||
|id=chr19:36606078..36606128,- | |id=chr19:36606078..36606128,- | ||
|ontology_enrichment_celltype=CL:0000066!1.49e-16!254;CL:0002321!3.00e-09!248;CL:0000220!1.13e-08!246;CL:0000133!1.37e-07!59;CL:0000221!2.04e-07!71 | |ontology_enrichment_celltype=CL:0000066!1.49e-16!254;CL:0002321!3.00e-09!248;CL:0000220!1.13e-08!246;CL:0000133!1.37e-07!59;CL:0000221!2.04e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:1000497;5.99e-07;17!CL:0002518;5.99e-07;17!CL:1000449;8.99e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.63e-17,253;CL:0002321,2.33e-09,250;CL:0000133,1.37e-07,59;CL:0000221,5.05e-07,72;CL:1000497,6.38e-07,17;CL:0002518,6.38e-07,17;CL:1000449,9.12e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.70e-16!235;DOID:14566!3.39e-15!239;DOID:0050687!1.78e-11!143;DOID:0050686!1.22e-08!137;DOID:305!2.66e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.70e-16,235;DOID:14566,3.39e-15,239;DOID:0050687,1.77e-11,143;DOID:0050686,1.22e-08,137;DOID:305,2.66e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.16e-18!94;UBERON:0001016!4.16e-18!94;UBERON:0005743!1.76e-17!86;UBERON:0001017!9.47e-17!82;UBERON:0002346!2.40e-14!90;UBERON:0000064!3.57e-14!219;UBERON:0000955!6.28e-14!69;UBERON:0006238!6.28e-14!69;UBERON:0000119!6.68e-14!312;UBERON:0003075!7.78e-14!86;UBERON:0007284!7.78e-14!86;UBERON:0000483!1.36e-13!309;UBERON:0001049!3.83e-13!57;UBERON:0005068!3.83e-13!57;UBERON:0006241!3.83e-13!57;UBERON:0007135!3.83e-13!57;UBERON:0000924!6.62e-13!173;UBERON:0006601!6.62e-13!173;UBERON:0004121!2.21e-12!169;UBERON:0003056!3.08e-12!61;UBERON:0001893!4.03e-12!34;UBERON:0000025!8.99e-12!194;UBERON:0002616!9.33e-12!59;UBERON:0002020!1.02e-11!34;UBERON:0003528!1.02e-11!34;UBERON:0002791!1.26e-11!33;UBERON:0001869!2.49e-11!32;UBERON:0002780!2.30e-10!41;UBERON:0001890!2.30e-10!41;UBERON:0006240!2.30e-10!41;UBERON:0003080!1.13e-09!42;UBERON:0000475!4.96e-09!365;UBERON:0000956!1.34e-08!25;UBERON:0000203!1.34e-08!25;UBERON:0000033!1.55e-08!123;UBERON:0002619!1.58e-08!22;UBERON:0001950!3.33e-08!20;UBERON:0000153!4.53e-07!129;UBERON:0007811!4.53e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.79e-11;34!UBERON:0001869;1.72e-10;32!UBERON:0003528;1.94e-10;34!UBERON:0002020;1.94e-10;34!UBERON:0002791;2.72e-10;32!UBERON:0000956;1.13e-08;25!UBERON:0000203;1.13e-08;25!UBERON:0002619;1.46e-08;22!UBERON:0001950;2.83e-08;20!UBERON:0000073;4.47e-08;53!UBERON:0002616;4.47e-08;53!UBERON:0002113;7.87e-08;24!UBERON:0011143;7.87e-08;24!UBERON:0002780;9.68e-08;41!UBERON:0001890;9.68e-08;41!UBERON:0001017;1.83e-07;75!UBERON:0000955;1.87e-07;68!UBERON:0000489;1.92e-07;29!UBERON:0006554;2.59e-07;30!UBERON:0001008;2.59e-07;30!UBERON:0001016;6.83e-07;83!UBERON:0006555;8.99e-07;15!UBERON:0004819;8.99e-07;15!UBERON:0001285;8.99e-07;15!UBERON:0007684;8.99e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.30e-18,89;UBERON:0001017,2.06e-17,81;UBERON:0002346,1.03e-14,86;UBERON:0000955,1.41e-14,68;UBERON:0006238,1.41e-14,68;UBERON:0003075,3.28e-14,82;UBERON:0007284,3.28e-14,82;UBERON:0001049,7.48e-14,56;UBERON:0005068,7.48e-14,56;UBERON:0006241,7.48e-14,56;UBERON:0007135,7.48e-14,56;UBERON:0000119,1.37e-13,309;UBERON:0000073,1.97e-13,53;UBERON:0002616,1.97e-13,53;UBERON:0010371,2.26e-13,104;UBERON:0003056,2.67e-13,61;UBERON:0000483,2.75e-13,306;UBERON:0000025,2.80e-12,192;UBERON:0004121,3.28e-12,171;UBERON:0000924,3.28e-12,171;UBERON:0006601,3.28e-12,171;UBERON:0001893,4.02e-12,34;UBERON:0003528,1.02e-11,34;UBERON:0002020,1.02e-11,34;UBERON:0001869,2.49e-11,32;UBERON:0002791,4.27e-11,32;UBERON:0002780,2.29e-10,41;UBERON:0001890,2.29e-10,41;UBERON:0003080,2.29e-10,41;UBERON:0006240,2.29e-10,41;UBERON:0010314,4.00e-09,132;UBERON:0000956,1.34e-08,25;UBERON:0000203,1.34e-08,25;UBERON:0002619,1.58e-08,22;UBERON:0001950,3.33e-08,20;UBERON:0011216,1.22e-07,223;UBERON:0004211,9.12e-07,15;UBERON:0009773,9.12e-07,15;UBERON:0001231,9.12e-07,15;UBERON:0001285,9.12e-07,15;UBERON:0007684,9.12e-07,15;UBERON:0004208,9.12e-07,15;UBERON:0004111,9.77e-07,240 | |||
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| ||
|short_description=p2@POLR2I | |short_description=p2@POLR2I | ||
}} | }} |
Latest revision as of 15:43, 17 September 2015
Short description: | p2@POLR2I |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_POLR2I_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_ENST00000221859, NM_006233, uc002ode.2, uc002odf.2_5end |
EntrezGene: | POLR2I |
HGNC: | 9196 |
UniProt: | P36954 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.63e-17 | 253 |
embryonic cell | 2.33e-09 | 250 |
neurectodermal cell | 1.37e-07 | 59 |
ectodermal cell | 5.05e-07 | 72 |
kidney cell | 6.38e-07 | 17 |
kidney epithelial cell | 6.38e-07 | 17 |
epithelial cell of nephron | 9.12e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.70e-16 | 235 |
disease of cellular proliferation | 3.39e-15 | 239 |
cell type cancer | 1.77e-11 | 143 |
organ system cancer | 1.22e-08 | 137 |
carcinoma | 2.66e-08 | 106 |