FFCP PHASE1:Hg19::chr15:42565844..42565866,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2595 | |EntrezGene=2595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4139 | |HGNC=4139 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001zph.2_5end | |association_with_transcript=0bp_to_uc001zph.2_5end | ||
|cluster_id=chr15:42565844..42565866,+ | |||
|description=CAGE_peak_7_at_GANC_5end | |description=CAGE_peak_7_at_GANC_5end | ||
|id=chr15:42565844..42565866,+ | |id=chr15:42565844..42565866,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.14e-12!82;UBERON:0007023!8.49e-12!115;UBERON:0005743!7.93e-11!86;UBERON:0000073!1.52e-10!94;UBERON:0001016!1.52e-10!94;UBERON:0001049!2.06e-10!57;UBERON:0005068!2.06e-10!57;UBERON:0006241!2.06e-10!57;UBERON:0007135!2.06e-10!57;UBERON:0000955!1.91e-09!69;UBERON:0006238!1.91e-09!69;UBERON:0002616!4.97e-08!59;UBERON:0002346!1.66e-07!90;UBERON:0000924!2.20e-07!173;UBERON:0006601!2.20e-07!173;UBERON:0002780!2.84e-07!41;UBERON:0001890!2.84e-07!41;UBERON:0006240!2.84e-07!41;UBERON:0003075!3.16e-07!86;UBERON:0007284!3.16e-07!86;UBERON:0004121!4.22e-07!169;UBERON:0000153!6.05e-07!129;UBERON:0007811!6.05e-07!129;UBERON:0004111!6.39e-07!241;UBERON:0000033!7.89e-07!123;UBERON:0000025!7.94e-07!194;UBERON:0003080!9.19e-07!42 | |ontology_enrichment_uberon=UBERON:0001017!7.14e-12!82;UBERON:0007023!8.49e-12!115;UBERON:0005743!7.93e-11!86;UBERON:0000073!1.52e-10!94;UBERON:0001016!1.52e-10!94;UBERON:0001049!2.06e-10!57;UBERON:0005068!2.06e-10!57;UBERON:0006241!2.06e-10!57;UBERON:0007135!2.06e-10!57;UBERON:0000955!1.91e-09!69;UBERON:0006238!1.91e-09!69;UBERON:0002616!4.97e-08!59;UBERON:0002346!1.66e-07!90;UBERON:0000924!2.20e-07!173;UBERON:0006601!2.20e-07!173;UBERON:0002780!2.84e-07!41;UBERON:0001890!2.84e-07!41;UBERON:0006240!2.84e-07!41;UBERON:0003075!3.16e-07!86;UBERON:0007284!3.16e-07!86;UBERON:0004121!4.22e-07!169;UBERON:0000153!6.05e-07!129;UBERON:0007811!6.05e-07!129;UBERON:0004111!6.39e-07!241;UBERON:0000033!7.89e-07!123;UBERON:0000025!7.94e-07!194;UBERON:0003080!9.19e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.57e-09;6!UBERON:0000125;2.16e-08;9!UBERON:0002308;2.16e-08;9!UBERON:0002365;6.77e-08;31!UBERON:0002330;6.77e-08;31!UBERON:0004732;1.76e-07;13!UBERON:0000988;2.60e-07;3!UBERON:0000073;3.77e-07;53!UBERON:0002616;3.77e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002298;3.57e-09;6!UBERON:0000125;2.16e-08;9!UBERON:0002308;2.16e-08;9!UBERON:0002365;6.77e-08;31!UBERON:0002330;6.77e-08;31!UBERON:0004732;1.76e-07;13!UBERON:0000988;2.60e-07;3!UBERON:0000073;3.77e-07;53!UBERON:0002616;3.77e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.17e-12,56;UBERON:0005068,3.17e-12,56;UBERON:0006241,3.17e-12,56;UBERON:0007135,3.17e-12,56;UBERON:0000073,1.17e-11,53;UBERON:0002616,1.17e-11,53;UBERON:0007023,6.55e-11,114;UBERON:0002298,1.27e-09,6;UBERON:0002346,1.52e-09,86;UBERON:0003075,2.51e-09,82;UBERON:0007284,2.51e-09,82;UBERON:0000955,8.41e-09,68;UBERON:0006238,8.41e-09,68;UBERON:0000125,1.01e-08,9;UBERON:0002308,1.01e-08,9;UBERON:0002365,1.70e-08,31;UBERON:0002330,1.70e-08,31;UBERON:0010371,1.85e-08,104;UBERON:0001017,2.15e-08,81;UBERON:0001016,7.14e-08,89;UBERON:0004732,7.57e-08,13;UBERON:0000988,1.17e-07,3;UBERON:0002780,2.57e-07,41;UBERON:0001890,2.57e-07,41;UBERON:0003080,2.57e-07,41;UBERON:0006240,2.57e-07,41;UBERON:0004121,2.91e-07,171;UBERON:0000924,2.91e-07,171;UBERON:0006601,2.91e-07,171;UBERON:0004111,4.24e-07,240;UBERON:0003076,8.04e-07,15;UBERON:0003057,8.04e-07,15 | |||
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|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.618831764800233,0,1.34465029290355,0,0,0,0.246242116153576,0.204000691244253,0.940364164434263,0.286235987131057,0.547497700291537,0.251085279189606,0.229240217243854,0.246301768349837,0.157421562627358,0.393364276848904,0.383829398097213,0,1.83884244895785,0,0,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0.895661896959697,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.632924774881769,0.211255286311942,0,0.838634582033504,0.336985893439485,0.150176892841506,0.32145117339416,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0,0,0.393419540227666,0,1.02800749499755,0.167186495390678,0,0,0,0,0.589211814949674,0,0.541607727530031,0.128091319725675,0.520237390239513,0,0,0,0.296573126324121,0,1.04535523804977,0,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,1.20964045934839,1.33720097891754,0.434473211648397,0,0,0.12786256184353,2.1686349143074,0,0.289693037921647,0,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.851363990735132,0,0,0,0,0.26591592103773,0,0,0,0.39752481473341,0,0,0,0.838998872419812,0.550236083880135,0.208994966536811,0.516833518338658,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0.735326160691737,0,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.25326102332916,1.19168262731897,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0.454072282934794,0,0.468642863667593,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0,0.516628905878827,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0.554128230968366,0.438977620880838,0,0.300476117813194,0.226864366320042,0.538168907066586,1.49490172172997,0.211931901159562,0,0.515262646192195,0.772921620136887,0.18611685633159,1.0126579934476,0.292311015483596,1.26216887122057,0.460249493211497,0.323292113637624,0.355009592516614,0.302256294682921,0.508681776931463,0,0,0,0.365921118388786,0.132529768321485,0.464775771478074,0.414644220061482,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0.721879481669586,0.354920400119532,0,0.241011029883482,0,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0.738155454624648,0,0,0,0,2.94848165003288,1.77236972004421,0,0.737930631258681,0,0,1.1240175325762,0,0.185176890317059,0.325808305310325,1.03993478527958,0,0.579652024875384,0,0,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.179117045405697,0.290633938513962,0,0.492663237895943,0.176096868026452,0.207328115540772,0.720599767084807,0.25248486685276,0.380987365753014,0,2.34434894420094,3.4214489204541,0.308482478109971,0,0.857479297891735,0.224262168690721,0.87192013766656,0.2933531432838,0.904902010304444,0,0,0.531876233169741,0,1.02882949704857,1.41849132023278,0.266422179016099,0,2.17048642156577,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.224170287987055,1.37921532141349,0.862510299438069,1.02674429023799,1.01637849688985,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,0.496215615637554,0.767309866440312,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.492762936082855,0.519254429183621,0.116210378459959,0.120859449591622,0,0.644566922551274,0.229628896329213,0.182091168006717,0.655622074797121,0,0,0,1.46139224653261,0.316654886678627,0,0.340187410553031,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,1.75169719801128,0.183138929636687,0.742585499285292,0,1.30012049207304,0,0.386682873168488,0.308097234229289,0.15350367472613,0.551346289938122,0.322260734604821,0.145016693914229,0.170453254832202,0.712256285173899,0.330569830721956,0.192190067365106,0.765676274967505,0,0,0.62962469366128,0,0.308033580176089,0,0.869932992075073,0.74129687641568,0.286249773483982,0,0,0.190630193923825,0,0.42793898803392,0.636406495851874,0.78494864019923,0.359744915166629,0.274537029736055,0.589062011728432,0.606547444719948,1.58510321173008,0,0,0,1.05650146756755,0,0.141405431953713,0,2.2054613741845,0,0.876901770507525,0,0,0.202910376962704,0,0,0.286822704408103,0.491245205065606,0.7133421029625,1.06428319221179,0.633322905892992,0,0.75894634753143,0.349934720244983,0.384888450902048,0,0,1.31801321087491,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0.144269212976445,0.213425530045242,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0,0.228234679033192,1.8801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| ||
|short_description=p7@GANC | |short_description=p7@GANC | ||
}} | }} |
Latest revision as of 15:45, 17 September 2015
Short description: | p7@GANC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GANC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001zph.2_5end |
EntrezGene: | GANC |
HGNC: | 4139 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 3.17e-12 | 56 |
neural rod | 3.17e-12 | 56 |
future spinal cord | 3.17e-12 | 56 |
neural keel | 3.17e-12 | 56 |
regional part of nervous system | 1.17e-11 | 53 |
regional part of brain | 1.17e-11 | 53 |
adult organism | 6.55e-11 | 114 |
brainstem | 1.27e-09 | 6 |
neurectoderm | 1.52e-09 | 86 |
neural plate | 2.51e-09 | 82 |
presumptive neural plate | 2.51e-09 | 82 |
brain | 8.41e-09 | 68 |
future brain | 8.41e-09 | 68 |
neural nucleus | 1.01e-08 | 9 |
nucleus of brain | 1.01e-08 | 9 |
exocrine gland | 1.70e-08 | 31 |
exocrine system | 1.70e-08 | 31 |
ecto-epithelium | 1.85e-08 | 104 |
central nervous system | 2.15e-08 | 81 |
nervous system | 7.14e-08 | 89 |
segmental subdivision of nervous system | 7.57e-08 | 13 |
pons | 1.17e-07 | 3 |
regional part of forebrain | 2.57e-07 | 41 |
forebrain | 2.57e-07 | 41 |
anterior neural tube | 2.57e-07 | 41 |
future forebrain | 2.57e-07 | 41 |
ectoderm-derived structure | 2.91e-07 | 171 |
ectoderm | 2.91e-07 | 171 |
presumptive ectoderm | 2.91e-07 | 171 |
anatomical conduit | 4.24e-07 | 240 |
posterior neural tube | 8.04e-07 | 15 |
chordal neural plate | 8.04e-07 | 15 |