FFCP PHASE1:Hg19::chr4:38806404..38806426,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7096 | |EntrezGene=7096 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11847 | |HGNC=11847 | ||
|TSSclassifier=strong | |||
|UniProt=Q15399,Q32MK4 | |UniProt=Q15399,Q32MK4 | ||
|association_with_transcript=0bp_to_ENST00000308979,ENST00000509754,NM_003263,uc003gtl.2_5end | |association_with_transcript=0bp_to_ENST00000308979,ENST00000509754,NM_003263,uc003gtl.2_5end | ||
|cluster_id=chr4:38806404..38806426,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_TLR1_5end | |description=CAGE_peak_1_at_TLR1_5end | ||
|id=chr4:38806404..38806426,- | |id=chr4:38806404..38806426,- | ||
|ontology_enrichment_celltype=CL:0000738!4.19e-48!140;CL:0002087!3.28e-43!119;CL:0000037!4.64e-42!172;CL:0000566!4.64e-42!172;CL:0002032!1.27e-39!165;CL:0000837!1.27e-39!165;CL:0002031!2.06e-39!124;CL:0000988!1.05e-35!182;CL:0000766!1.81e-30!76;CL:0002009!8.45e-29!65;CL:0002194!7.17e-28!63;CL:0000576!7.17e-28!63;CL:0000040!7.17e-28!63;CL:0000559!7.17e-28!63;CL:0002057!4.34e-26!42;CL:0000557!2.16e-25!71;CL:0000763!2.21e-24!112;CL:0000049!2.21e-24!112;CL:0000839!3.60e-24!70;CL:0000860!9.14e-23!45;CL:0000838!9.52e-14!52;CL:0000542!9.70e-14!53;CL:0000051!9.70e-14!53;CL:0000945!1.64e-09!24;CL:0000826!1.64e-09!24;CL:0000236!1.32e-07!14;CL:0000791!3.61e-07!18;CL:0000789!3.61e-07!18;CL:0002420!3.61e-07!18;CL:0002419!3.61e-07!18;CL:0000790!3.61e-07!18 | |ontology_enrichment_celltype=CL:0000738!4.19e-48!140;CL:0002087!3.28e-43!119;CL:0000037!4.64e-42!172;CL:0000566!4.64e-42!172;CL:0002032!1.27e-39!165;CL:0000837!1.27e-39!165;CL:0002031!2.06e-39!124;CL:0000988!1.05e-35!182;CL:0000766!1.81e-30!76;CL:0002009!8.45e-29!65;CL:0002194!7.17e-28!63;CL:0000576!7.17e-28!63;CL:0000040!7.17e-28!63;CL:0000559!7.17e-28!63;CL:0002057!4.34e-26!42;CL:0000557!2.16e-25!71;CL:0000763!2.21e-24!112;CL:0000049!2.21e-24!112;CL:0000839!3.60e-24!70;CL:0000860!9.14e-23!45;CL:0000838!9.52e-14!52;CL:0000542!9.70e-14!53;CL:0000051!9.70e-14!53;CL:0000945!1.64e-09!24;CL:0000826!1.64e-09!24;CL:0000236!1.32e-07!14;CL:0000791!3.61e-07!18;CL:0000789!3.61e-07!18;CL:0002420!3.61e-07!18;CL:0002419!3.61e-07!18;CL:0000790!3.61e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.50e-22;39!CL:0000234;1.50e-22;39!CL:0000860;1.92e-22;33!CL:0002057;1.92e-22;33!CL:0000576;2.42e-21;48!CL:0000766;5.07e-16;69!CL:0002087;4.46e-15;104!CL:0000738;1.62e-12;136!CL:0000945;4.74e-11;24!CL:0000763;4.25e-10;100!CL:0000542;1.22e-09;53!CL:0000988;9.65e-09;177!CL:0000236;2.12e-08;13!CL:0000791;3.77e-08;18!CL:0000789;3.77e-08;18!CL:0002419;3.77e-08;18!CL:0000094;1.60e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.43e-60,136;CL:0002087,9.48e-56,115;CL:0000037,3.27e-54,168;CL:0002032,5.26e-51,161;CL:0000837,5.26e-51,161;CL:0002031,5.52e-49,120;CL:0000988,2.54e-48,177;CL:0002009,5.89e-39,61;CL:0000766,8.77e-39,72;CL:0002194,7.58e-38,59;CL:0000576,7.58e-38,59;CL:0000040,7.58e-38,59;CL:0000559,7.58e-38,59;CL:0000473,2.44e-35,48;CL:0000234,2.44e-35,48;CL:0000557,9.51e-33,67;CL:0000763,2.59e-32,108;CL:0000049,2.59e-32,108;CL:0000860,8.02e-31,42;CL:0002057,8.02e-31,42;CL:0000839,9.98e-31,66;CL:0000838,2.60e-16,52;CL:0000542,2.67e-16,53;CL:0000051,2.67e-16,53;CL:0000945,4.85e-11,24;CL:0000826,4.85e-11,24;CL:0000236,9.00e-09,14;CL:0000791,2.99e-08,18;CL:0000789,2.99e-08,18;CL:0002420,2.99e-08,18;CL:0002419,2.99e-08,18;CL:0000790,2.99e-08,18;CL:0000134,4.77e-08,354;CL:0002393,1.48e-07,9;CL:0002397,1.48e-07,9;CL:0000094,1.68e-07,8;CL:0002320,3.92e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.14e-22;42!CL:0000049;4.17e-10;108!CL:0000051;1.22e-09;53!CL:0000790;3.77e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.81e-31!102;UBERON:0003061!4.81e-31!102;UBERON:0002193!7.16e-29!112;UBERON:0007023!4.83e-27!115;UBERON:0002371!5.11e-23!80;UBERON:0001474!2.93e-20!86;UBERON:0002405!1.07e-17!115;UBERON:0004765!5.19e-17!101;UBERON:0001434!5.19e-17!101;UBERON:0001049!1.48e-09!57;UBERON:0005068!1.48e-09!57;UBERON:0006241!1.48e-09!57;UBERON:0007135!1.48e-09!57;UBERON:0003081!9.82e-09!216;UBERON:0003080!3.35e-08!42;UBERON:0002780!4.56e-08!41;UBERON:0001890!4.56e-08!41;UBERON:0006240!4.56e-08!41;UBERON:0002616!5.66e-08!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.57e-08;114!UBERON:0000178;3.49e-07;15!UBERON:0000179;3.49e-07;15!UBERON:0000463;3.49e-07;15 | |||
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|phase1_expression=0.181678379270557,0,1.69145284915165,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0.495065411840187,0,1.34465029290355,0.602694528023977,0,0,0,0,0,0.85870796139317,0.547497700291537,0.125542639594803,3.74425688164961,3.61242593579761,2.51874500203774,14.1611139665605,23.41359328393,21.5194411409346,0,0.30120591877825,0,11.7750144882058,11.0892001340189,10.8632162553893,17.1738576644882,17.046278034962,10.6335326650767,71.2051208082959,43.7256449125622,48.6817822828613,151.650363047086,89.5565986542478,120.079110287969,39.9777943477778,25.0812411693314,36.5453517656222,89.7600264045109,64.5524980453334,160.807916324238,26.5454174167196,30.9832648120237,24.3767675869815,72.6615430634454,49.3960131604701,79.776836978005,35.5057315150247,30.1673285451528,38.3602275479425,172.512229997653,155.781116602494,195.637160494507,11.8985787837719,7.94339314567596,12.4564449799115,94.7207468017922,69.3572281498868,168.321354646465,23.6105806027014,14.362827803515,42.4059599170785,74.3618607818035,68.8837931886741,61.4299831339541,61.6684184994258,74.1873850637041,66.218941719197,58.7126252106972,73.2013372092652,69.5950425843255,19.3595868907455,39.3219800108735,24.9062591081795,27.3107342442565,28.8285110665929,28.1628695577697,34.3743333848128,20.989182599778,23.9069447025968,22.3150131960957,23.7009401437642,9.25199300053181,11.2101712596307,11.0621315605532,15.343362068879,4.32311839024081,5.96244347098577,25.2451608039924,1.95553359980154,0.946895611469467,3.89653456815823,8.13296335261767,4.71369451959739,5.31681347000691,6.22848886659536,9.09448370052294,7.1532641157933,5.59088875652499,6.07970039128866,13.9105481152825,12.307784742451,12.0393372640371,6.27213142829861,7.7050353034345,9.96373283364995,14.0887252647878,13.9160830610727,19.4324902737699,13.0216690771284,10.4549724889321,13.250610478844,14.078527226986,24.9861453104692,30.0707110095901,15.6014319414999,6.04820229674197,4.27904313253612,6.95157138637435,0,0.670700859703636,0.383587685530591,0,0,0.289693037921647,0,0.973269740605272,0.189069634328136,0,0.087834785693126,3.53643503843824,0,0,18.499201438317,13.2338600347443,18.0822826305657,25.2800061763662,32.0317150036872,27.4878550983878,2.58391129576717,1.72046919021225,0.694281003215189,1.13061588384802,0,3.30141650328081,1.8809546988313,0.258416759169329,0.35576626268671,0.33472061276467,2.01414658554573,0.760272105718513,0.488124115096339,1.10298924103761,0.81014194788176,3.12549048994279,0.898117490504679,0.450445921933289,0,0.949265659568129,0.549605231791222,279.374484964454,244.301566413445,0,0.993943903390637,0.506522046658319,0.264818361626438,0,0.709336764396714,0,0,0,0.933633106199299,0.538842688278752,0.653847612453835,0.151357427644931,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0.375355559615893,0.277064115484183,0,0.612975591598039,0.300476117813194,0.907457465280168,0,0.213557388818567,0.211931901159562,0,0,0,0,0.337552664482532,0,0,0.0920498986422993,0.161646056818812,0,0,0,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,3.9313088667105,3.54473944008842,0,0,0.171567810298526,1.86575485194663,0,0,0.277765335475589,0,0,0,0,0,1.58803092537181,0,1.71228737011138,0,0,92.8238112949488,74.4133563142776,46.8188161209494,0.93733833986777,1.00789276919316,0.708875486211932,0,0,0.383382679165211,0,0.176096868026452,0.414656231081544,0.576479813667846,0.6312121671319,0.571481048629521,0,1.17217447210047,0,0.616964956219941,0.600686115687835,0.571652865261156,0.112131084345361,0,0.51336800074665,1.55126058909333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.71295439353627,2.61460037580088,3.89894665610022,27.9734695474738,44.7008811374593,37.9501091069457,0,0,0,0,0.61642896765115,1.25342674267927,1.79336230389644,14.1862147345388,7.76259269494262,10.1390998661001,0.508189248444927,0,0,3.01529277601828,0,494.34463580514,466.691876358279,558.21769659834,0.858840442033979,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.35142424497814,0,0,1.03473071292505,0,0,0,0,0,22.3309468212718,20.7085632785872,9.60548020230999,0,0,0,0,0.153461973288062,0,1.02511319404561,0,0.160853921143607,0,0,0,0,0,0,0,0.802025881213139,0,0.34444334449382,0,0.786746489756545,0,0.15403067420883,0,0,0.844413031143006,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0.438519753291869,0,0,0,0,15.1470287122152,0,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.426133137080504,0.178064071293475,0.495854746082934,0,0.255225424989168,0,0,0.31481234683064,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.143124886741991,1.86079184679834,0.632758849437452,0.953150969619124,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0.842516912477962,0.48763373908959,0.731140468893853,0,0.409499734223957,0.282810863907425,0,0,0.6634389752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| ||
|short_description=p1@TLR1 | |short_description=p1@TLR1 | ||
}} | }} |
Latest revision as of 16:15, 17 September 2015
Short description: | p1@TLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TLR1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000308979, ENST00000509754, NM_003263, uc003gtl.2_5end |
EntrezGene: | TLR1 |
HGNC: | 11847 |
UniProt: | Q15399Q32MK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.97e-40 | 98 |
blood island | 2.97e-40 | 98 |
hemolymphoid system | 6.86e-37 | 108 |
adult organism | 8.03e-31 | 114 |
bone marrow | 1.84e-30 | 76 |
immune system | 2.15e-30 | 93 |
bone element | 5.18e-26 | 82 |
skeletal element | 1.20e-21 | 90 |
skeletal system | 1.89e-18 | 100 |
lateral plate mesoderm | 1.11e-10 | 203 |
neural tube | 3.68e-10 | 56 |
neural rod | 3.68e-10 | 56 |
future spinal cord | 3.68e-10 | 56 |
neural keel | 3.68e-10 | 56 |
regional part of nervous system | 3.87e-09 | 53 |
regional part of brain | 3.87e-09 | 53 |
regional part of forebrain | 5.03e-08 | 41 |
forebrain | 5.03e-08 | 41 |
anterior neural tube | 5.03e-08 | 41 |
future forebrain | 5.03e-08 | 41 |
blood | 3.50e-07 | 15 |
haemolymphatic fluid | 3.50e-07 | 15 |
organism substance | 3.50e-07 | 15 |