FFCP PHASE1:Hg19::chr3:197282720..197282758,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:197282720..197282758,- to FFCP PHASE1:Hg19::chr3:197282720..197282758,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=622 | |EntrezGene=622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1027 | |HGNC=1027 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_ENST00000492681_5end | |||
|cluster_id=chr3:197282720..197282758,- | |||
|description=CAGE_peak_3_at_BDH1_5end | |||
|id=chr3:197282720..197282758,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.68e-10;5!CL:0000123;4.21e-07;2!CL:0000242;4.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.49e-09,5;CL:0000242,2.38e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.52e-14!51;DOID:0060083!2.52e-14!51;DOID:1240!9.32e-13!39;DOID:8692!1.11e-09!31;DOID:162!1.58e-09!235;DOID:14566!2.37e-09!239;DOID:0050686!9.56e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:2531;5.18e-11;51!DOID:0060083;5.18e-11;51!DOID:1240;2.47e-10;39!DOID:0060058;5.97e-08;10!DOID:74;3.01e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.79e-17,51;DOID:0060083,1.79e-17,51;DOID:1240,2.28e-12,39;DOID:0050686,2.06e-08,137;DOID:0060058,5.03e-08,10;DOID:74,1.91e-07,2;DOID:162,5.59e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001869!6.44e-17!32;UBERON:0002020!1.29e-16!34;UBERON:0003528!1.29e-16!34;UBERON:0001893!2.62e-16!34;UBERON:0002791!1.37e-15!33;UBERON:0001049!6.44e-15!57;UBERON:0005068!6.44e-15!57;UBERON:0006241!6.44e-15!57;UBERON:0007135!6.44e-15!57;UBERON:0007023!3.93e-14!115;UBERON:0000073!5.00e-14!94;UBERON:0001016!5.00e-14!94;UBERON:0002346!7.55e-14!90;UBERON:0002780!1.60e-13!41;UBERON:0001890!1.60e-13!41;UBERON:0006240!1.60e-13!41;UBERON:0002619!3.57e-13!22;UBERON:0003080!6.22e-13!42;UBERON:0001017!6.70e-13!82;UBERON:0005743!7.48e-13!86;UBERON:0002616!1.16e-12!59;UBERON:0000955!1.27e-12!69;UBERON:0006238!1.27e-12!69;UBERON:0003075!1.39e-12!86;UBERON:0007284!1.39e-12!86;UBERON:0001950!5.52e-12!20;UBERON:0000956!7.46e-12!25;UBERON:0000203!7.46e-12!25;UBERON:0003056!7.69e-11!61;UBERON:0000924!2.07e-09!173;UBERON:0006601!2.07e-09!173;UBERON:0000153!1.60e-08!129;UBERON:0007811!1.60e-08!129;UBERON:0004121!1.71e-08!169;UBERON:0000033!1.52e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.65e-13;32!UBERON:0000369;3.61e-12;4!UBERON:0002435;3.61e-12;4!UBERON:0000204;3.61e-12;4!UBERON:0001893;5.44e-12;34!UBERON:0002791;2.21e-11;32!UBERON:0009663;2.13e-10;7!UBERON:0003528;1.21e-09;34!UBERON:0002020;1.21e-09;34!UBERON:0005383;1.21e-09;3!UBERON:0005382;1.21e-09;3!UBERON:0002420;5.22e-08;9!UBERON:0000125;5.22e-08;9!UBERON:0007245;5.22e-08;9!UBERON:0002308;5.22e-08;9!UBERON:0010009;5.22e-08;9!UBERON:0010011;5.22e-08;9!UBERON:0000454;5.22e-08;9!UBERON:0002780;1.68e-07;41!UBERON:0001890;1.68e-07;41!UBERON:0001950;1.68e-07;20!UBERON:0002619;9.77e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,7.22e-14,32;UBERON:0001893,6.88e-13,34;UBERON:0000369,2.04e-12,4;UBERON:0002435,2.04e-12,4;UBERON:0000204,2.04e-12,4;UBERON:0010082,2.04e-12,4;UBERON:0002791,6.62e-12,32;UBERON:0003528,4.66e-11,34;UBERON:0002020,4.66e-11,34;UBERON:0009663,1.84e-10,7;UBERON:0002780,3.31e-10,41;UBERON:0001890,3.31e-10,41;UBERON:0003080,3.31e-10,41;UBERON:0006240,3.31e-10,41;UBERON:0005383,6.56e-10,3;UBERON:0005382,6.56e-10,3;UBERON:0002420,4.67e-08,9;UBERON:0000125,4.67e-08,9;UBERON:0007245,4.67e-08,9;UBERON:0002308,4.67e-08,9;UBERON:0010009,4.67e-08,9;UBERON:0010011,4.67e-08,9;UBERON:0000454,4.67e-08,9;UBERON:0001950,1.75e-07,20;UBERON:0000073,2.91e-07,53;UBERON:0002616,2.91e-07,53;UBERON:0002370,4.38e-07,4;UBERON:0005058,4.38e-07,4;UBERON:0009113,4.38e-07,4;UBERON:0003295,4.38e-07,4;UBERON:0005562,4.38e-07,4;UBERON:0003056,4.74e-07,61;UBERON:0001873,5.42e-07,2;UBERON:0010122,5.42e-07,2;UBERON:0000955,6.98e-07,68;UBERON:0006238,6.98e-07,68;UBERON:0001016,9.24e-07,89;UBERON:0001049,1.00e-06,56;UBERON:0005068,1.00e-06,56;UBERON:0006241,1.00e-06,56;UBERON:0007135,1.00e-06,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0,0.376627918784408,0.382067028739756,0.492603536699674,0.0787107813136792,0,0,0,0,0,0,0,6.39761546193397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0.790152254325231,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0.384273959177026,0.520237390239513,0.493313713811028,0.829050053357545,0.579606171470105,0.14828656316206,0.267540828089713,0,0.453237370790265,0,0,0,0,0.651083453856419,0,0,0.255973222308837,1.24930726552346,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.392937226493138,0,0.741568885568859,0,0,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,2.07355300420312,1.45782745153634,1.04574548582567,0.932949495138334,1.26160425437814,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0,0,1.26755034821831,0,0,3.5317047953172,0.491953754172454,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0.651616610620649,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.288239906833923,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0.0920809889358963,0,0,0,0,0.0770153371044148,1.56869953835371,0,0,0,0,0,0,0,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0.54941678891006,0.41254749960294,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15865397713722,2.59684583357601,2.84567373393656,0.637705090915289,3.99158742865633,0.383010740264733,1.2700414963433,0.973865820823666,2.52717460302113,2.05411211129873,0.47003968731907,0,4.06300266723848,1.92705690124439,0.403599414382095,0.425846237690326,0.343505344755765,0.307240764308458,0.223676107892416,0,0.19538809540204,0.278406173895242,1.23087398947712,0.270455678475983,1.99843180798692,0,0.935702702041099,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,4.64475897881586,0,0.276283915531148,0.755798243562828,0.102268682502155,2.58478091468246,0,0,0,0.511572370226872,0,0,0,1.93866549219044,0.834912883456661,0,0.520855522170466,0.61221999997337,0,0.682760689712998,0,0,0.689486746482929,0,0.347249989866585,1.77148277162768,1.32656082487949,0,0.442317039724898,0.591095237907095,1.53569778007781,0,0.139423744278603,0.0769502585037971,0,0.922255617552241,0,0,0,0,0,5.10966490978682,1.09886179476517,0.664846727600626,0,0,0,0,0.317873157960757,0,0.326465616318295,0.706765357169704,1.29833183845255,0.995261931078505,0.353830258013357,0.611030144933625,0,0.247127877893006,0.313265848516366,0.202203398942031,1.60515529459758,0.702793337176017,3.28418620588199,0,0.485560759068186,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0.19871461170299,0.823040347426423,0.195551382734803,0,0,0,0.72045208577053,0,1.20116498503375,0,0,0.471388069233591,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0.558564802544508,0.916641696046735,0,0.399358000997982,0.429226048136571,1.11585728720936,0.940568614814168,0,0,0,0,0,0,4.57235993155236,0.795229689809303,0.681017030557878,0.482259445395058,0.962776056180637,0.83088067605837,0,0,1.57948847310864,0,0.157611414598396,0.577000469484979,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.656740165994712,0,0.113312091520126,0,0,0.904980694530854,0.79339561045614,0,0,0,0,0,0,0,1.58330377895165,0,0,0.2506898940227,0,0,0.157054096250234,0.886068179966986,1.34228891392159,0.625954653532499,0,0.221858103073705,0.683060432355218,0.691743174681154,0,0.303298235083296,0,0,2.34167452903441,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0.633936370075881,0,1.60037594541211,0,0,0,0.279759015438889,0,1.27894371303652,0.754773679776773,0.314531883711793,1.20130602011215,1.69732529954025,0.212574920101683,0.123935764259002,0,0,6.78211007010779,0,0,0,1.28458450192919,1.41696576325585,0.478901577171454,1.23069818544453,0.504143392443436,1.38314504928436,0.322951291263702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| ||
|short_description=p3@BDH1 | |||
}} | }} |
Latest revision as of 17:11, 17 September 2015
Short description: | p3@BDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_ENST00000492681_5end |
EntrezGene: | BDH1 |
HGNC: | 1027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.49e-09 | 5 |
Merkel cell | 2.38e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.79e-17 | 51 |
immune system cancer | 1.79e-17 | 51 |
leukemia | 2.28e-12 | 39 |
organ system cancer | 2.06e-08 | 137 |
lymphoma | 5.03e-08 | 10 |
hematopoietic system disease | 1.91e-07 | 2 |
cancer | 5.59e-07 | 235 |