FFCP PHASE1:Hg19::chr2:56411131..56411187,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114800 | |EntrezGene=114800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29400 | |HGNC=29400 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PX6 | |UniProt=Q96PX6 | ||
|association_with_transcript=-70bp_to_ENST00000407595,NM_001080433,uc002rzn.2_5end | |association_with_transcript=-70bp_to_ENST00000407595,NM_001080433,uc002rzn.2_5end | ||
|cluster_id=chr2:56411131..56411187,+ | |||
|coexpression_cluster_id=C4238 | |||
|description=CAGE_peak_1_at_CCDC85A_5end | |description=CAGE_peak_1_at_CCDC85A_5end | ||
|id=chr2:56411131..56411187,+ | |id=chr2:56411131..56411187,+ | ||
|ontology_enrichment_celltype=CL:0000222!3.53e-10!119;CL:0000359!1.48e-07!32;CL:0000192!4.72e-07!42;CL:0000514!4.72e-07!42;CL:0002139!5.18e-07!24 | |ontology_enrichment_celltype=CL:0000222!3.53e-10!119;CL:0000359!1.48e-07!32;CL:0000192!4.72e-07!42;CL:0000514!4.72e-07!42;CL:0002139!5.18e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.29e-08;24!CL:0000071;9.00e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.66e-08,24;CL:0000222,2.03e-07,121;CL:0000115,3.83e-07,36;CL:0000071,7.57e-07,18;CL:0002546,7.57e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.57e-07;82!CL:0002546;9.00e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.72e-32!115;UBERON:0000025!2.76e-24!194;UBERON:0001049!1.01e-22!57;UBERON:0005068!1.01e-22!57;UBERON:0006241!1.01e-22!57;UBERON:0007135!1.01e-22!57;UBERON:0004111!1.37e-20!241;UBERON:0003075!5.21e-20!86;UBERON:0007284!5.21e-20!86;UBERON:0000955!1.82e-18!69;UBERON:0006238!1.82e-18!69;UBERON:0000477!3.15e-18!286;UBERON:0003080!3.39e-18!42;UBERON:0005743!6.62e-18!86;UBERON:0002616!7.39e-18!59;UBERON:0002346!7.63e-18!90;UBERON:0002780!1.71e-17!41;UBERON:0001890!1.71e-17!41;UBERON:0006240!1.71e-17!41;UBERON:0001017!4.73e-17!82;UBERON:0000483!8.00e-17!309;UBERON:0000073!1.18e-16!94;UBERON:0001016!1.18e-16!94;UBERON:0000475!3.69e-16!365;UBERON:0001981!3.71e-16!60;UBERON:0007500!3.71e-16!60;UBERON:0004537!3.71e-16!60;UBERON:0006965!3.71e-16!60;UBERON:0000119!4.14e-16!312;UBERON:0001893!4.49e-16!34;UBERON:0004872!4.60e-16!84;UBERON:0002020!5.43e-16!34;UBERON:0003528!5.43e-16!34;UBERON:0000055!1.42e-15!69;UBERON:0002791!1.95e-15!33;UBERON:0001869!5.20e-15!32;UBERON:0002619!8.77e-15!22;UBERON:0003056!2.84e-14!61;UBERON:0001950!1.40e-13!20;UBERON:0002049!5.41e-13!79;UBERON:0007798!5.41e-13!79;UBERON:0001637!8.49e-13!42;UBERON:0003509!8.49e-13!42;UBERON:0004572!8.49e-13!42;UBERON:0000468!8.51e-13!659;UBERON:0000956!9.61e-12!25;UBERON:0000203!9.61e-12!25;UBERON:0000481!3.57e-11!347;UBERON:0004573!7.42e-10!33;UBERON:0004571!7.42e-10!33;UBERON:0000153!9.61e-10!129;UBERON:0007811!9.61e-10!129;UBERON:0001009!1.05e-09!113;UBERON:0000033!1.52e-09!123;UBERON:0000467!3.70e-09!625;UBERON:0000480!5.17e-09!626;UBERON:0004535!8.68e-09!110;UBERON:0000064!4.53e-08!219;UBERON:0003914!1.04e-07!118;UBERON:0000947!1.04e-07!21;UBERON:0010191!1.04e-07!21;UBERON:0002385!3.98e-07!63;UBERON:0001015!3.98e-07!63;UBERON:0000383!3.98e-07!63;UBERON:0004121!6.80e-07!169;UBERON:0001134!7.32e-07!61;UBERON:0002036!7.32e-07!61;UBERON:0003082!7.32e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.33e-19;22!UBERON:0001893;2.06e-18;34!UBERON:0003528;5.35e-18;34!UBERON:0002020;5.35e-18;34!UBERON:0001869;6.77e-18;32!UBERON:0002791;9.63e-18;32!UBERON:0001950;2.06e-17;20!UBERON:0000956;1.12e-15;25!UBERON:0000203;1.12e-15;25!UBERON:0002780;7.59e-15;41!UBERON:0001890;7.59e-15;41!UBERON:0000073;6.30e-13;53!UBERON:0002616;6.30e-13;53!UBERON:0001017;1.22e-09;75!UBERON:0000955;5.81e-09;68!UBERON:0001637;8.44e-09;42!UBERON:0003509;8.44e-09;42!UBERON:0004572;8.44e-09;42!UBERON:0007023;1.18e-08;114!UBERON:0007500;2.46e-08;56!UBERON:0001981;2.46e-08;56!UBERON:0004537;2.46e-08;56!UBERON:0002420;1.58e-07;9!UBERON:0007245;1.58e-07;9!UBERON:0010009;1.58e-07;9!UBERON:0010011;1.58e-07;9!UBERON:0000454;1.58e-07;9!UBERON:0000947;1.72e-07;21!UBERON:0010191;1.72e-07;21!UBERON:0001016;2.15e-07;83!UBERON:0010260;2.41e-07;9!UBERON:0000125;3.38e-07;9!UBERON:0002308;3.38e-07;9!UBERON:0004573;5.28e-07;33!UBERON:0004571;5.28e-07;33!UBERON:0000200;5.48e-07;6!UBERON:0004638;9.00e-07;18!UBERON:0001986;9.00e-07;18!UBERON:0004852;9.00e-07;18!UBERON:0000055;9.42e-07;65 | |||
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| ||
|short_description=p1@CCDC85A | |short_description=p1@CCDC85A | ||
}} | }} |
Latest revision as of 18:29, 17 September 2015
Short description: | p1@CCDC85A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC85A_5end |
Coexpression cluster: | C4238_brain_nonsmall_spinal_Olfactory_insula_frontal_temporal |
Association with transcript: | -70bp_to_ENST00000407595, NM_001080433, uc002rzn.2_5end |
EntrezGene: | CCDC85A |
HGNC: | 29400 |
UniProt: | Q96PX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.66e-08 | 24 |
mesodermal cell | 2.03e-07 | 121 |
endothelial cell | 3.83e-07 | 36 |
blood vessel endothelial cell | 7.57e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.57e-07 | 18 |