FFCP PHASE1:Hg19::chr12:21487792..21487802,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6579 | |EntrezGene=6579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10956 | |HGNC=10956 | ||
|TSSclassifier=strong | |||
|UniProt=C9JSB7 | |UniProt=C9JSB7 | ||
|association_with_transcript=26bp_to_ENST00000445053_5end | |association_with_transcript=26bp_to_ENST00000445053_5end | ||
|cluster_id=chr12:21487792..21487802,- | |||
|description=CAGE_peak_6_at_SLCO1A2_5end | |description=CAGE_peak_6_at_SLCO1A2_5end | ||
|id=chr12:21487792..21487802,- | |id=chr12:21487792..21487802,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.34e-66;1!UBERON:0003056;3.66e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.11e-62!57;UBERON:0005068!1.11e-62!57;UBERON:0006241!1.11e-62!57;UBERON:0007135!1.11e-62!57;UBERON:0001017!1.35e-57!82;UBERON:0005743!9.52e-55!86;UBERON:0001893!4.45e-54!34;UBERON:0002020!1.10e-53!34;UBERON:0003528!1.10e-53!34;UBERON:0000073!4.26e-53!94;UBERON:0001016!4.26e-53!94;UBERON:0001869!4.48e-51!32;UBERON:0002616!1.12e-50!59;UBERON:0000955!2.02e-50!69;UBERON:0006238!2.02e-50!69;UBERON:0002791!2.10e-49!33;UBERON:0003075!1.92e-47!86;UBERON:0007284!1.92e-47!86;UBERON:0002346!3.86e-45!90;UBERON:0002780!1.85e-44!41;UBERON:0001890!1.85e-44!41;UBERON:0006240!1.85e-44!41;UBERON:0007023!6.42e-44!115;UBERON:0003080!2.43e-43!42;UBERON:0001950!4.02e-40!20;UBERON:0002619!1.93e-36!22;UBERON:0000956!5.59e-32!25;UBERON:0000203!5.59e-32!25;UBERON:0000033!4.29e-29!123;UBERON:0003056!6.16e-29!61;UBERON:0004121!1.10e-27!169;UBERON:0000153!1.56e-27!129;UBERON:0007811!1.56e-27!129;UBERON:0000924!6.19e-27!173;UBERON:0006601!6.19e-27!173;UBERON:0000200!1.03e-25!6;UBERON:0002308!1.40e-24!9;UBERON:0000125!1.40e-24!9;UBERON:0003076!7.23e-20!15;UBERON:0003057!7.23e-20!15;UBERON:0002298!9.43e-20!8;UBERON:0000988!1.21e-19!3;UBERON:0002771!1.02e-18!3;UBERON:0001871!1.25e-18!7;UBERON:0002420!2.76e-17!9;UBERON:0007245!2.76e-17!9;UBERON:0010009!2.76e-17!9;UBERON:0010011!2.76e-17!9;UBERON:0000454!2.76e-17!9;UBERON:0004732!2.79e-17!13;UBERON:0000025!9.43e-17!194;UBERON:0009663!1.04e-14!7;UBERON:0005162!3.50e-14!2;UBERON:0000122!3.50e-14!2;UBERON:0001875!8.65e-14!2;UBERON:0006514!8.65e-14!2;UBERON:0002360!2.24e-13!2;UBERON:0000094!2.24e-13!2;UBERON:0007645!2.24e-13!2;UBERON:0002148!2.71e-13!2;UBERON:0009662!2.71e-13!2;UBERON:0004733!4.13e-13!12;UBERON:0002028!4.13e-13!12;UBERON:0007277!4.13e-13!12;UBERON:0004111!1.62e-12!241;UBERON:0001872!4.33e-12!5;UBERON:0000477!7.59e-11!286;UBERON:0000483!1.22e-10!309;UBERON:0000064!1.65e-10!219;UBERON:0000119!1.74e-10!312;UBERON:0001896!1.66e-09!3;UBERON:0005290!1.66e-09!3;UBERON:0010096!1.66e-09!3;UBERON:0002240!2.43e-09!3;UBERON:0006331!3.69e-09!3;UBERON:0000475!4.09e-09!365;UBERON:0000941!4.57e-08!1;UBERON:0004904!4.57e-08!1;UBERON:0002464!4.57e-08!1;UBERON:0001021!4.57e-08!1;UBERON:0001785!4.57e-08!1;UBERON:0003112!5.58e-08!1;UBERON:0000032!5.58e-08!1;UBERON:0005253!5.58e-08!1;UBERON:0003128!5.58e-08!1;UBERON:0002241!5.58e-08!1;UBERON:0001703!5.58e-08!1;UBERON:0004761!5.58e-08!1;UBERON:0009617!5.58e-08!1;UBERON:0007190!5.96e-08!1;UBERON:0001882!7.76e-08!1;UBERON:0005403!7.76e-08!1;UBERON:0002336!8.28e-08!1;UBERON:0001018!8.28e-08!1;UBERON:0002473!8.28e-08!1;UBERON:0005340!8.28e-08!1;UBERON:0002316!8.28e-08!1;UBERON:0003544!8.28e-08!1;UBERON:0001020!8.28e-08!1;UBERON:0005970!8.28e-08!1;UBERON:0002437!8.28e-08!1;UBERON:0002581!1.07e-07!1;UBERON:0002022!1.39e-07!1;UBERON:0001874!2.04e-07!1;UBERON:0002363!2.80e-07!1;UBERON:0007647!2.80e-07!1;UBERON:0010115!2.80e-07!1;UBERON:0000369!3.28e-07!4;UBERON:0002435!3.28e-07!4;UBERON:0000204!3.28e-07!4;UBERON:0010082!3.28e-07!4;UBERON:0000062!4.66e-07!511;UBERON:0002680!7.13e-07!9;UBERON:0001895!7.13e-07!9;UBERON:0010092!7.13e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.34e-66;1!UBERON:0001785;3.34e-66;1!UBERON:0002464;3.34e-66;1!UBERON:0004904;3.34e-66;1!UBERON:0001021;3.34e-66;1!UBERON:0003714;5.96e-34;2!UBERON:0005162;5.96e-34;2!UBERON:0000122;5.96e-34;2!UBERON:0000988;2.62e-23;3!UBERON:0001870;3.66e-23;3!UBERON:0004732;2.28e-21;13!UBERON:0002298;2.19e-12;6!UBERON:0002680;1.04e-08;9!UBERON:0001895;1.04e-08;9!UBERON:0000010;1.16e-08;8!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.39e-66,1;UBERON:0001785,2.39e-66,1;UBERON:0002464,2.39e-66,1;UBERON:0004904,2.39e-66,1;UBERON:0001021,2.39e-66,1;UBERON:0003902,2.39e-66,1;UBERON:0005425,2.39e-66,1;UBERON:0003714,5.04e-34,2;UBERON:0005162,5.04e-34,2;UBERON:0000122,5.04e-34,2;UBERON:0000988,2.62e-23,3;UBERON:0001870,4.09e-23,3;UBERON:0004732,2.16e-21,13;UBERON:0001781,8.69e-18,4;UBERON:0002298,2.19e-12,6;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0000010,1.12e-08,8;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.159633859057151,0.41023272848151,0,0,0.807378228159255,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,0,0.317079050969534,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,2.10706172228178,0.394636641377094,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.159633859057151,0.41023272848151,0,0,0.807378228159255,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,0,0.317079050969534,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,2.10706172228178,0.394636641377094,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@SLCO1A2 | |short_description=p6@SLCO1A2 | ||
}} | }} |
Latest revision as of 19:23, 17 September 2015
Short description: | p6@SLCO1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLCO1A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000445053_5end |
EntrezGene: | SLCO1A2 |
HGNC: | 10956 |
UniProt: | C9JSB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.39e-66 | 1 |
cranial nerve | 2.39e-66 | 1 |
nerve trunk | 2.39e-66 | 1 |
nerve connecting eye with brain | 2.39e-66 | 1 |
nerve | 2.39e-66 | 1 |
retinal neural layer | 2.39e-66 | 1 |
presumptive neural retina | 2.39e-66 | 1 |
neural tissue | 5.04e-34 | 2 |
multi cell component structure | 5.04e-34 | 2 |
neuron projection bundle | 5.04e-34 | 2 |
pons | 2.62e-23 | 3 |
frontal cortex | 4.09e-23 | 3 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
layer of retina | 8.69e-18 | 4 |
brainstem | 2.19e-12 | 6 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
peripheral nervous system | 1.12e-08 | 8 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |