FFCP PHASE1:Hg19::chr17:7608511..7608538,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1949 | |EntrezGene=1949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3228 | |HGNC=3228 | ||
|TSSclassifier=strong | |||
|UniProt=Q15768 | |UniProt=Q15768 | ||
|association_with_transcript=0bp_to_ENST00000226091,NM_001406,uc002gis.2_5end | |association_with_transcript=0bp_to_ENST00000226091,NM_001406,uc002gis.2_5end | ||
|cluster_id=chr17:7608511..7608538,+ | |||
|coexpression_cluster_id=C3689 | |||
|description=CAGE_peak_1_at_EFNB3_5end | |description=CAGE_peak_1_at_EFNB3_5end | ||
|id=chr17:7608511..7608538,+ | |id=chr17:7608511..7608538,+ | ||
|ontology_enrichment_celltype=CL:0000133!1.15e-13!59;CL:0000221!2.46e-13!71;CL:0000055!4.25e-11!180;CL:0002321!1.47e-10!248;CL:0000220!3.28e-10!246;CL:0000333!2.88e-09!41;CL:0002319!1.14e-07!25 | |ontology_enrichment_celltype=CL:0000133!1.15e-13!59;CL:0000221!2.46e-13!71;CL:0000055!4.25e-11!180;CL:0002321!1.47e-10!248;CL:0000220!3.28e-10!246;CL:0000333!2.88e-09!41;CL:0002319!1.14e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.14e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.39e-14,59;CL:0000221,3.58e-13,72;CL:0000333,2.55e-09,41;CL:0002319,6.25e-08,25;CL:0002321,1.07e-07,250;CL:0000710,7.00e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000133;2.35e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!3.30e-28!173;UBERON:0006601!3.30e-28!173;UBERON:0004121!1.89e-26!169;UBERON:0001017!2.27e-25!82;UBERON:0005743!3.69e-25!86;UBERON:0000073!5.58e-24!94;UBERON:0001016!5.58e-24!94;UBERON:0000119!2.10e-22!312;UBERON:0000033!3.56e-22!123;UBERON:0002346!4.84e-22!90;UBERON:0000475!1.19e-21!365;UBERON:0000483!1.85e-21!309;UBERON:0000153!1.34e-20!129;UBERON:0007811!1.34e-20!129;UBERON:0000955!2.06e-20!69;UBERON:0006238!2.06e-20!69;UBERON:0003075!2.83e-20!86;UBERON:0007284!2.83e-20!86;UBERON:0003056!8.56e-19!61;UBERON:0001049!9.43e-18!57;UBERON:0005068!9.43e-18!57;UBERON:0006241!9.43e-18!57;UBERON:0007135!9.43e-18!57;UBERON:0002616!2.24e-17!59;UBERON:0000481!5.48e-16!347;UBERON:0001869!1.01e-15!32;UBERON:0003080!1.28e-15!42;UBERON:0002780!1.49e-15!41;UBERON:0001890!1.49e-15!41;UBERON:0006240!1.49e-15!41;UBERON:0001893!2.31e-15!34;UBERON:0002020!8.27e-15!34;UBERON:0003528!8.27e-15!34;UBERON:0002791!9.81e-15!33;UBERON:0000025!1.34e-14!194;UBERON:0004111!2.18e-14!241;UBERON:0000477!4.44e-13!286;UBERON:0000956!6.42e-13!25;UBERON:0000203!6.42e-13!25;UBERON:0002619!8.68e-13!22;UBERON:0000468!2.87e-12!659;UBERON:0001950!8.68e-12!20;UBERON:0000922!2.70e-11!612;UBERON:0000064!6.41e-11!219;UBERON:0002050!1.37e-09!605;UBERON:0005423!1.37e-09!605;UBERON:0000923!2.46e-09!604;UBERON:0005291!2.46e-09!604;UBERON:0006598!2.46e-09!604;UBERON:0002532!2.46e-09!604;UBERON:0000467!1.08e-07!625;UBERON:0000480!1.65e-07!626 | |ontology_enrichment_uberon=UBERON:0000924!3.30e-28!173;UBERON:0006601!3.30e-28!173;UBERON:0004121!1.89e-26!169;UBERON:0001017!2.27e-25!82;UBERON:0005743!3.69e-25!86;UBERON:0000073!5.58e-24!94;UBERON:0001016!5.58e-24!94;UBERON:0000119!2.10e-22!312;UBERON:0000033!3.56e-22!123;UBERON:0002346!4.84e-22!90;UBERON:0000475!1.19e-21!365;UBERON:0000483!1.85e-21!309;UBERON:0000153!1.34e-20!129;UBERON:0007811!1.34e-20!129;UBERON:0000955!2.06e-20!69;UBERON:0006238!2.06e-20!69;UBERON:0003075!2.83e-20!86;UBERON:0007284!2.83e-20!86;UBERON:0003056!8.56e-19!61;UBERON:0001049!9.43e-18!57;UBERON:0005068!9.43e-18!57;UBERON:0006241!9.43e-18!57;UBERON:0007135!9.43e-18!57;UBERON:0002616!2.24e-17!59;UBERON:0000481!5.48e-16!347;UBERON:0001869!1.01e-15!32;UBERON:0003080!1.28e-15!42;UBERON:0002780!1.49e-15!41;UBERON:0001890!1.49e-15!41;UBERON:0006240!1.49e-15!41;UBERON:0001893!2.31e-15!34;UBERON:0002020!8.27e-15!34;UBERON:0003528!8.27e-15!34;UBERON:0002791!9.81e-15!33;UBERON:0000025!1.34e-14!194;UBERON:0004111!2.18e-14!241;UBERON:0000477!4.44e-13!286;UBERON:0000956!6.42e-13!25;UBERON:0000203!6.42e-13!25;UBERON:0002619!8.68e-13!22;UBERON:0000468!2.87e-12!659;UBERON:0001950!8.68e-12!20;UBERON:0000922!2.70e-11!612;UBERON:0000064!6.41e-11!219;UBERON:0002050!1.37e-09!605;UBERON:0005423!1.37e-09!605;UBERON:0000923!2.46e-09!604;UBERON:0005291!2.46e-09!604;UBERON:0006598!2.46e-09!604;UBERON:0002532!2.46e-09!604;UBERON:0000467!1.08e-07!625;UBERON:0000480!1.65e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.11e-16;32!UBERON:0001893;1.75e-15;34!UBERON:0003528;5.97e-15;34!UBERON:0002020;5.97e-15;34!UBERON:0002791;8.71e-15;32!UBERON:0002619;1.11e-14;22!UBERON:0000956;1.31e-14;25!UBERON:0000203;1.31e-14;25!UBERON:0001950;1.53e-13;20!UBERON:0002780;2.88e-12;41!UBERON:0001890;2.88e-12;41!UBERON:0000073;1.79e-11;53!UBERON:0002616;1.79e-11;53!UBERON:0001017;5.73e-11;75!UBERON:0000955;2.19e-10;68!UBERON:0001016;5.81e-09;83 | |||
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|phase1_expression=1.09007027562334,0.856402095563933,0,0,1.34088328328186,0.872338524100369,0,0,0.783556884599516,1.22866968250754,6.97801167972428,2.40285509343189,1.84636884759917,7.30221482464275,3.97676850873499,3.36162573225888,4.82155622419182,4.38186054232424,5.85519358548608,10.5884109946038,3.67201244239655,9.71709636582072,2.86235987131057,2.46373965131192,1.88313959392204,0,0,0,0,0,0.77408061658038,1.83884244895785,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,14.6284119788377,9.38981203585091,5.88167784480239,0.722878304769133,3.00802746381534,1.15877215168659,0,1.94653948121054,2.74150969775797,2.66075276955077,4.47957407034943,3.40545596294053,3.64295288292542,1.85392221392215,0.324547393654683,0,0.132957960518865,0,0,0,0,0.860234595106124,1.04142150482278,1.69592382577203,2.51699661725944,2.47606237746061,0.626984899610432,0.258416759169329,0.35576626268671,0.33472061276467,2.41697590265488,0.760272105718513,6.58967555380058,0,7.29127753093584,0.267899184852239,0,0,0,0.949265659568129,1.09921046358244,0,0,3.48875241714027,0,3.29239330327907,0.132409180813219,2.58152958673932,1.41867352879343,3.36406560085384,2.1349799145941,3.20667812942308,3.11211035399766,2.55950276932407,0.980771418680752,7.7192288098915,8.06646294271999,5.15507150034353,0.624320153660641,0,0.747243402759005,0.704606991862589,0.647491777472526,0.842704840213491,1.22492502752936,1.71968044236475,2.9964476540972,3.56400857184616,0.741800787835671,3.64064544775211,0,0.673344455816265,1.25118519871964,0.277064115484183,0.877955241761676,0.612975591598039,1.05166641234618,2.49550802952046,1.61450672119976,2.13557388818567,2.33125091275518,0.900273288253207,1.8549455262919,0.515281080091258,0.930584281657949,0.843881661206331,2.24105111870757,1.51460264546469,1.28869858099219,10.345347636404,2.13005755509969,0.906768884048762,2.37384829234683,0.193260853163297,0.272746120590835,0,3.17131635936948,2.78312513475119,6.50686080069303,10.4697665565524,3.78481276313443,7.2995471815166,1.56449532329816,3.85944562915731,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,15.6398124305932,14.7008711385542,0,0,2.95394953340702,0,0.737930631258681,1.88724591328378,5.04851312879678,1.1240175325762,3.41798506199545,2.59247646443883,5.53874119027552,3.11980435583874,1.44331342025273,11.7089709024828,0.939269553886573,2.45422961193825,0.462985512576611,1.52203321787679,4.74122638775565,3.43394464837949,0,0,0,0,0.839910640994298,0.425325291727159,0.806026704325635,1.74380363108377,3.4504441124869,0,0,0.207328115540772,0,0.12624243342638,5.46081890912654,14.5155601712146,10.5495702489042,8.55362230113526,3.90744472272629,2.70308752059526,8.28896654628677,3.47606361470618,7.84728123899904,3.0802080044799,1.55126058909333,32.1890801266694,0,0.797814349754612,0,1.80045161983499,0,0.799266537048298,3.86040582876998,2.71310802695722,1.64648067356154,0.65147236858747,3.19852753868291,0,0.602878754119172,0.871533458600294,1.89948683245908,0,0,0,1.19812427745791,8.04033550838797,1.42636905040718,0.144781306667579,1.43833425785268,1.61154866915906,0,0,0,0,9.90969034467607,11.712586847186,10.05275456611,17.0866590641036,10.2070200264506,0,0,0,10.9195427630035,7.50255781589516,3.52644530809656,5.40724239980099,3.56857977594324,2.68094105557689,2.92853537481783,0.300946099727719,0,4.1389228517002,1.32845119707087,2.76553752812555,3.0409265063829,17.8179053291094,6.17658162859541,0,0,0,2.72814814301633,9.98612637062982,13.6075631998356,0,0.61384789315225,0.841980283299221,0.128139149255701,0.511707249066704,0.160853921143607,0,0.308419387605311,0.355123450626254,1.06765302817952,0,0.697262270759755,1.20859449591622,2.00506470303285,0.184161977871793,0.68888668898764,0.910455840033585,1.31124414959424,3.15839729035188,1.92538342761037,3.92174884588428,2.92278449306521,1.68882606228601,2.27466768141793,0.680374821106063,2.37507507712353,6.16909010761157,4.06419656315779,3.01013864312912,0,0.831076008928724,0.895499018888713,0,0,1.02580050046556,2.62411716559765,0.650756789328606,0.9273691048295,0.366277859273374,0.247528499761764,3.44559322797703,1.30012049207304,0,5.12354806948246,0.924291702687866,1.5350367472613,0.275673144969061,5.26359199854541,4.93056759308377,0.852266274161009,5.2528901031575,0,0.960950336825531,1.27612712494584,0.10115778085555,0,0.31481234683064,0.6970372701606,0.924100740528266,2.66153015158511,0,1.48259375283136,1.5743737541619,2.232950216158,0.316379424718726,0,4.09436466098134,2.99557291623744,4.77304871888905,3.13979456079692,1.2591072030832,1.09814811894422,1.17812402345686,1.41527737101321,0,2.52755073743389,2.92580243453754,0,2.11300293513511,0.409499734223957,0.848432591722276,5.65040583101214,2.2054613741845,0,0,1.15755106853338,6.55894752046633,0.608731130888112,0.30982349809975,0.845086807596724,0.860468113224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| ||
|short_description=p1@EFNB3 | |short_description=p1@EFNB3 | ||
}} | }} |
Latest revision as of 20:13, 17 September 2015
Short description: | p1@EFNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EFNB3_5end |
Coexpression cluster: | C3689_brain_amygdala_temporal_duodenum_insula_putamen_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000226091, NM_001406, uc002gis.2_5end |
EntrezGene: | EFNB3 |
HGNC: | 3228 |
UniProt: | Q15768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.39e-14 | 59 |
ectodermal cell | 3.58e-13 | 72 |
migratory neural crest cell | 2.55e-09 | 41 |
neural cell | 6.25e-08 | 25 |
embryonic cell | 1.07e-07 | 250 |
neurecto-epithelial cell | 7.00e-07 | 20 |