FFCP PHASE1:Hg19::chr8:28748765..28748785,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79618 | |EntrezGene=79618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26137 | |HGNC=26137 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NT76 | |UniProt=Q6NT76 | ||
|association_with_transcript=-47bp_to_ENST00000355231_5end | |association_with_transcript=-47bp_to_ENST00000355231_5end | ||
|cluster_id=chr8:28748765..28748785,+ | |||
|description=CAGE_peak_10_at_HMBOX1_5end | |description=CAGE_peak_10_at_HMBOX1_5end | ||
|id=chr8:28748765..28748785,+ | |id=chr8:28748765..28748785,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.17e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.06e-23;1!UBERON:0006241;1.17e-08;3!UBERON:0003057;1.17e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.87e-31!115;UBERON:0001049!1.08e-24!57;UBERON:0005068!1.08e-24!57;UBERON:0006241!1.08e-24!57;UBERON:0007135!1.08e-24!57;UBERON:0001017!2.90e-20!82;UBERON:0002616!4.63e-20!59;UBERON:0005743!7.73e-20!86;UBERON:0000073!1.97e-19!94;UBERON:0001016!1.97e-19!94;UBERON:0000955!5.42e-19!69;UBERON:0006238!5.42e-19!69;UBERON:0002780!6.59e-19!41;UBERON:0001890!6.59e-19!41;UBERON:0006240!6.59e-19!41;UBERON:0002020!1.98e-18!34;UBERON:0003528!1.98e-18!34;UBERON:0003080!2.93e-18!42;UBERON:0001893!3.17e-18!34;UBERON:0003075!9.03e-18!86;UBERON:0007284!9.03e-18!86;UBERON:0002791!3.98e-17!33;UBERON:0002346!2.04e-16!90;UBERON:0001869!6.92e-16!32;UBERON:0002619!8.27e-15!22;UBERON:0001950!1.64e-12!20;UBERON:0000956!1.71e-12!25;UBERON:0000203!1.71e-12!25;UBERON:0003056!6.42e-12!61;UBERON:0002298!4.12e-10!8;UBERON:0000153!7.56e-10!129;UBERON:0007811!7.56e-10!129;UBERON:0000033!1.38e-09!123;UBERON:0000025!1.59e-08!194;UBERON:0004121!1.94e-08!169;UBERON:0000924!5.93e-08!173;UBERON:0006601!5.93e-08!173;UBERON:0003076!1.26e-07!15;UBERON:0003057!1.26e-07!15;UBERON:0004111!1.29e-07!241;UBERON:0002308!1.32e-07!9;UBERON:0000125!1.32e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.87e-31!115;UBERON:0001049!1.08e-24!57;UBERON:0005068!1.08e-24!57;UBERON:0006241!1.08e-24!57;UBERON:0007135!1.08e-24!57;UBERON:0001017!2.90e-20!82;UBERON:0002616!4.63e-20!59;UBERON:0005743!7.73e-20!86;UBERON:0000073!1.97e-19!94;UBERON:0001016!1.97e-19!94;UBERON:0000955!5.42e-19!69;UBERON:0006238!5.42e-19!69;UBERON:0002780!6.59e-19!41;UBERON:0001890!6.59e-19!41;UBERON:0006240!6.59e-19!41;UBERON:0002020!1.98e-18!34;UBERON:0003528!1.98e-18!34;UBERON:0003080!2.93e-18!42;UBERON:0001893!3.17e-18!34;UBERON:0003075!9.03e-18!86;UBERON:0007284!9.03e-18!86;UBERON:0002791!3.98e-17!33;UBERON:0002346!2.04e-16!90;UBERON:0001869!6.92e-16!32;UBERON:0002619!8.27e-15!22;UBERON:0001950!1.64e-12!20;UBERON:0000956!1.71e-12!25;UBERON:0000203!1.71e-12!25;UBERON:0003056!6.42e-12!61;UBERON:0002298!4.12e-10!8;UBERON:0000153!7.56e-10!129;UBERON:0007811!7.56e-10!129;UBERON:0000033!1.38e-09!123;UBERON:0000025!1.59e-08!194;UBERON:0004121!1.94e-08!169;UBERON:0000924!5.93e-08!173;UBERON:0006601!5.93e-08!173;UBERON:0003076!1.26e-07!15;UBERON:0003057!1.26e-07!15;UBERON:0004111!1.29e-07!241;UBERON:0002308!1.32e-07!9;UBERON:0000125!1.32e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002148;1.22e-44;2!UBERON:0006331;1.22e-44;2!UBERON:0009662;1.22e-44;2!UBERON:0002298;1.73e-33;6!UBERON:0000988;3.59e-30;3!UBERON:0004733;3.73e-17;12!UBERON:0002028;3.73e-17;12!UBERON:0004732;6.82e-16;13!UBERON:0001954;2.45e-12;2!UBERON:0003022;2.45e-12;2!UBERON:0002421;2.45e-12;2!UBERON:0002600;2.45e-12;2!UBERON:0002680;9.23e-11;9!UBERON:0000125;9.23e-11;9!UBERON:0002308;9.23e-11;9!UBERON:0001895;9.23e-11;9!UBERON:0001896;1.17e-08;3!UBERON:0002240;1.17e-08;3!UBERON:0005174;1.17e-08;3!UBERON:0005290;1.17e-08;3!UBERON:0001137;1.17e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,9.79e-45,2;UBERON:0006331,9.79e-45,2;UBERON:0009662,9.79e-45,2;UBERON:0002298,1.47e-33,6;UBERON:0000988,3.10e-30,3;UBERON:0003076,6.29e-24,15;UBERON:0003057,6.29e-24,15;UBERON:0004733,3.44e-17,12;UBERON:0002028,3.44e-17,12;UBERON:0007277,3.44e-17,12;UBERON:0004732,6.32e-16,13;UBERON:0001954,1.85e-12,2;UBERON:0003022,1.85e-12,2;UBERON:0002421,1.85e-12,2;UBERON:0002600,1.85e-12,2;UBERON:0002680,8.79e-11,9;UBERON:0000125,8.79e-11,9;UBERON:0002308,8.79e-11,9;UBERON:0001895,8.79e-11,9;UBERON:0010092,8.79e-11,9;UBERON:0001049,6.82e-10,56;UBERON:0005068,6.82e-10,56;UBERON:0006241,6.82e-10,56;UBERON:0007135,6.82e-10,56;UBERON:0002240,8.96e-09,3;UBERON:0005174,8.96e-09,3;UBERON:0001137,8.96e-09,3;UBERON:0001896,1.12e-08,3;UBERON:0005290,1.12e-08,3;UBERON:0010096,1.12e-08,3;UBERON:0000073,6.31e-07,53;UBERON:0002616,6.31e-07,53;UBERON:0001017,7.97e-07,81;UBERON:0003075,7.97e-07,82;UBERON:0007284,7.97e-07,82 | |||
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| ||
|short_description=p10@HMBOX1 | |short_description=p10@HMBOX1 | ||
}} | }} |
Latest revision as of 21:04, 17 September 2015
Short description: | p10@HMBOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HMBOX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000355231_5end |
EntrezGene: | HMBOX1 |
HGNC: | 26137 |
UniProt: | Q6NT76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 9.79e-45 | 2 |
brainstem nucleus | 9.79e-45 | 2 |
hindbrain nucleus | 9.79e-45 | 2 |
brainstem | 1.47e-33 | 6 |
pons | 3.10e-30 | 3 |
posterior neural tube | 6.29e-24 | 15 |
chordal neural plate | 6.29e-24 | 15 |
segmental subdivision of hindbrain | 3.44e-17 | 12 |
hindbrain | 3.44e-17 | 12 |
presumptive hindbrain | 3.44e-17 | 12 |
segmental subdivision of nervous system | 6.32e-16 | 13 |
Ammon's horn | 1.85e-12 | 2 |
lobe parts of cerebral cortex | 1.85e-12 | 2 |
hippocampal formation | 1.85e-12 | 2 |
limbic lobe | 1.85e-12 | 2 |
regional part of metencephalon | 8.79e-11 | 9 |
neural nucleus | 8.79e-11 | 9 |
nucleus of brain | 8.79e-11 | 9 |
metencephalon | 8.79e-11 | 9 |
future metencephalon | 8.79e-11 | 9 |
neural tube | 6.82e-10 | 56 |
neural rod | 6.82e-10 | 56 |
future spinal cord | 6.82e-10 | 56 |
neural keel | 6.82e-10 | 56 |
spinal cord | 8.96e-09 | 3 |
dorsal region element | 8.96e-09 | 3 |
dorsum | 8.96e-09 | 3 |
medulla oblongata | 1.12e-08 | 3 |
myelencephalon | 1.12e-08 | 3 |
future myelencephalon | 1.12e-08 | 3 |
regional part of nervous system | 6.31e-07 | 53 |
regional part of brain | 6.31e-07 | 53 |
central nervous system | 7.97e-07 | 81 |
neural plate | 7.97e-07 | 82 |
presumptive neural plate | 7.97e-07 | 82 |