FFCP PHASE1:Hg19::chr9:79320602..79320607,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158471 | |EntrezGene=158471 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25209 | |HGNC=25209 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCH2 | |UniProt=E9PCH2 | ||
|association_with_transcript=-205bp_to_ENST00000441554_5end | |association_with_transcript=-205bp_to_ENST00000441554_5end | ||
|cluster_id=chr9:79320602..79320607,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_33_at_PRUNE2_5end | |description=CAGE_peak_33_at_PRUNE2_5end | ||
|id=chr9:79320602..79320607,- | |id=chr9:79320602..79320607,- | ||
|ontology_enrichment_celltype=CL:0002567!2.05e-07!3 | |ontology_enrichment_celltype=CL:0002567!2.05e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002567;3.27e-23;3!CL:0000138;2.45e-12;6!CL:0000153;1.12e-08;9!CL:0000447;1.12e-08;9!CL:0000148;6.13e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,4.09e-23,3;CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9;CL:0000148,6.56e-08,10;CL:0000541,6.56e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.39e-66;1!UBERON:0003056;3.27e-23;3 | |||
|ontology_enrichment_disease=DOID:3371!8.95e-20!1;DOID:4549!8.95e-20!1;DOID:5861!8.95e-20!1;DOID:6496!8.95e-20!1;DOID:0060084!2.19e-07!3;DOID:127!2.19e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.39e-66;1!DOID:4549;2.39e-66;1!DOID:5861;2.39e-66;1!DOID:6496;2.39e-66;1!DOID:201;2.45e-12;6!DOID:0060100;2.45e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0000941!1.08e-19!1;UBERON:0004904!1.08e-19!1;UBERON:0002464!1.08e-19!1;UBERON:0001021!1.08e-19!1;UBERON:0001785!1.08e-19!1;UBERON:0003714!1.57e-10!2;UBERON:0005162!1.57e-10!2;UBERON:0000122!1.57e-10!2;UBERON:0001876!2.49e-10!2;UBERON:0001870!3.58e-10!2;UBERON:0002418!1.82e-07!3;UBERON:0004755!1.82e-07!3 | |ontology_enrichment_uberon=UBERON:0000941!1.08e-19!1;UBERON:0004904!1.08e-19!1;UBERON:0002464!1.08e-19!1;UBERON:0001021!1.08e-19!1;UBERON:0001785!1.08e-19!1;UBERON:0003714!1.57e-10!2;UBERON:0005162!1.57e-10!2;UBERON:0000122!1.57e-10!2;UBERON:0001876!2.49e-10!2;UBERON:0001870!3.58e-10!2;UBERON:0002418!1.82e-07!3;UBERON:0004755!1.82e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.39e-66;1!UBERON:0001785;2.39e-66;1!UBERON:0002464;2.39e-66;1!UBERON:0004904;2.39e-66;1!UBERON:0001021;2.39e-66;1!UBERON:0003714;5.04e-34;2!UBERON:0005162;5.04e-34;2!UBERON:0000122;5.04e-34;2!UBERON:0002418;3.27e-23;3!UBERON:0004755;3.27e-23;3!UBERON:0000010;1.12e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.39e-66,1;UBERON:0001785,2.39e-66,1;UBERON:0002464,2.39e-66,1;UBERON:0004904,2.39e-66,1;UBERON:0001021,2.39e-66,1;UBERON:0003902,2.39e-66,1;UBERON:0005425,2.39e-66,1;UBERON:0003714,5.04e-34,2;UBERON:0005162,5.04e-34,2;UBERON:0000122,5.04e-34,2;UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0001781,8.69e-18,4;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0000010,1.12e-08,8 | |||
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|short_description=p33@PRUNE2 | |short_description=p33@PRUNE2 | ||
}} | }} |
Latest revision as of 21:58, 17 September 2015
Short description: | p33@PRUNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_PRUNE2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -205bp_to_ENST00000441554_5end |
EntrezGene: | PRUNE2 |
HGNC: | 25209 |
UniProt: | E9PCH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 4.09e-23 | 3 |
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
melanocyte | 6.56e-08 | 10 |
melanoblast | 6.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.39e-66 | 1 |
cranial nerve | 2.39e-66 | 1 |
nerve trunk | 2.39e-66 | 1 |
nerve connecting eye with brain | 2.39e-66 | 1 |
nerve | 2.39e-66 | 1 |
retinal neural layer | 2.39e-66 | 1 |
presumptive neural retina | 2.39e-66 | 1 |
neural tissue | 5.04e-34 | 2 |
multi cell component structure | 5.04e-34 | 2 |
neuron projection bundle | 5.04e-34 | 2 |
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
layer of retina | 8.69e-18 | 4 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
peripheral nervous system | 1.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |