FFCP PHASE1:Hg19::chr11:45307785..45307803,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57586 | |EntrezGene=57586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14962 | |HGNC=14962 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L8C5 | |UniProt=Q7L8C5 | ||
|association_with_transcript=66bp_to_ENST00000020926_5end | |association_with_transcript=66bp_to_ENST00000020926_5end | ||
|cluster_id=chr11:45307785..45307803,- | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_3_at_SYT13_5end | |description=CAGE_peak_3_at_SYT13_5end | ||
|id=chr11:45307785..45307803,- | |id=chr11:45307785..45307803,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;3.13e-07;1!CL:0000164;3.13e-07;1!CL:0000502;3.13e-07;1!CL:0000172;3.13e-07;1!CL:0000173;3.13e-07;1!CL:0002553;4.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.13e-07,1;CL:0000164,3.13e-07,1;CL:0000502,3.13e-07,1;CL:0000172,3.13e-07,1;CL:0000173,3.13e-07,1;CL:0002351,3.13e-07,1;CL:0002553,4.43e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.90e-08;3!CL:0002351;3.13e-07;1!UBERON:0006242;3.83e-07;1!UBERON:0008801;5.89e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;1.96e-12;2!DOID:4430;3.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.02e-12,2;DOID:4430,3.13e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.18e-33!57;UBERON:0005068!1.18e-33!57;UBERON:0006241!1.18e-33!57;UBERON:0007135!1.18e-33!57;UBERON:0002616!2.99e-30!59;UBERON:0007023!1.48e-29!115;UBERON:0001950!8.05e-29!20;UBERON:0002619!8.70e-29!22;UBERON:0002780!1.30e-28!41;UBERON:0001890!1.30e-28!41;UBERON:0006240!1.30e-28!41;UBERON:0001893!7.49e-28!34;UBERON:0003080!9.41e-28!42;UBERON:0001017!1.06e-27!82;UBERON:0000955!1.20e-27!69;UBERON:0006238!1.20e-27!69;UBERON:0002020!1.41e-27!34;UBERON:0003528!1.41e-27!34;UBERON:0001869!1.52e-27!32;UBERON:0005743!2.50e-27!86;UBERON:0002791!3.47e-26!33;UBERON:0000956!8.70e-25!25;UBERON:0000203!8.70e-25!25;UBERON:0000073!1.15e-23!94;UBERON:0001016!1.15e-23!94;UBERON:0003075!1.18e-21!86;UBERON:0007284!1.18e-21!86;UBERON:0002346!1.59e-21!90;UBERON:0003056!4.28e-18!61;UBERON:0000033!6.89e-15!123;UBERON:0000153!1.20e-14!129;UBERON:0007811!1.20e-14!129;UBERON:0000025!6.84e-13!194;UBERON:0000200!1.84e-12!6;UBERON:0001871!3.37e-12!7;UBERON:0000924!1.45e-11!173;UBERON:0006601!1.45e-11!173;UBERON:0000481!1.97e-11!347;UBERON:0004121!2.21e-11!169;UBERON:0000064!8.45e-11!219;UBERON:0004111!1.22e-09!241;UBERON:0000062!1.12e-08!511;UBERON:0000483!2.18e-08!309;UBERON:0000119!3.59e-08!312;UBERON:0005409!8.11e-08!35;UBERON:0000160!8.42e-08!27;UBERON:0000922!1.02e-07!612;UBERON:0000477!1.45e-07!286;UBERON:0004733!2.06e-07!12;UBERON:0002028!2.06e-07!12;UBERON:0007277!2.06e-07!12;UBERON:0000475!2.26e-07!365;UBERON:0002021!2.89e-07!5;UBERON:0003076!3.01e-07!15;UBERON:0003057!3.01e-07!15;UBERON:0001872!3.23e-07!5;UBERON:0002771!5.74e-07!3;UBERON:0004732!9.43e-07!13 | |ontology_enrichment_uberon=UBERON:0001049!1.18e-33!57;UBERON:0005068!1.18e-33!57;UBERON:0006241!1.18e-33!57;UBERON:0007135!1.18e-33!57;UBERON:0002616!2.99e-30!59;UBERON:0007023!1.48e-29!115;UBERON:0001950!8.05e-29!20;UBERON:0002619!8.70e-29!22;UBERON:0002780!1.30e-28!41;UBERON:0001890!1.30e-28!41;UBERON:0006240!1.30e-28!41;UBERON:0001893!7.49e-28!34;UBERON:0003080!9.41e-28!42;UBERON:0001017!1.06e-27!82;UBERON:0000955!1.20e-27!69;UBERON:0006238!1.20e-27!69;UBERON:0002020!1.41e-27!34;UBERON:0003528!1.41e-27!34;UBERON:0001869!1.52e-27!32;UBERON:0005743!2.50e-27!86;UBERON:0002791!3.47e-26!33;UBERON:0000956!8.70e-25!25;UBERON:0000203!8.70e-25!25;UBERON:0000073!1.15e-23!94;UBERON:0001016!1.15e-23!94;UBERON:0003075!1.18e-21!86;UBERON:0007284!1.18e-21!86;UBERON:0002346!1.59e-21!90;UBERON:0003056!4.28e-18!61;UBERON:0000033!6.89e-15!123;UBERON:0000153!1.20e-14!129;UBERON:0007811!1.20e-14!129;UBERON:0000025!6.84e-13!194;UBERON:0000200!1.84e-12!6;UBERON:0001871!3.37e-12!7;UBERON:0000924!1.45e-11!173;UBERON:0006601!1.45e-11!173;UBERON:0000481!1.97e-11!347;UBERON:0004121!2.21e-11!169;UBERON:0000064!8.45e-11!219;UBERON:0004111!1.22e-09!241;UBERON:0000062!1.12e-08!511;UBERON:0000483!2.18e-08!309;UBERON:0000119!3.59e-08!312;UBERON:0005409!8.11e-08!35;UBERON:0000160!8.42e-08!27;UBERON:0000922!1.02e-07!612;UBERON:0000477!1.45e-07!286;UBERON:0004733!2.06e-07!12;UBERON:0002028!2.06e-07!12;UBERON:0007277!2.06e-07!12;UBERON:0000475!2.26e-07!365;UBERON:0002021!2.89e-07!5;UBERON:0003076!3.01e-07!15;UBERON:0003057!3.01e-07!15;UBERON:0001872!3.23e-07!5;UBERON:0002771!5.74e-07!3;UBERON:0004732!9.43e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.67e-34;20!UBERON:0002619;6.84e-31;22!UBERON:0000956;4.68e-27;25!UBERON:0000203;4.68e-27;25!UBERON:0001869;2.15e-22;32!UBERON:0001893;1.88e-19;34!UBERON:0002791;8.75e-19;32!UBERON:0003528;7.35e-16;34!UBERON:0002020;7.35e-16;34!UBERON:0002780;3.43e-15;41!UBERON:0001890;3.43e-15;41!UBERON:0000200;2.60e-14;6!UBERON:0000073;7.08e-14;53!UBERON:0002616;7.08e-14;53!UBERON:0001017;5.77e-11;75!UBERON:0002021;2.71e-10;5!UBERON:0000955;3.38e-10;68!UBERON:0002108;4.31e-10;4!UBERON:0001872;4.31e-10;5!UBERON:0001016;1.75e-09;83!UBERON:0001870;5.44e-08;3!UBERON:0001871;1.76e-07;6!UBERON:0011216;3.94e-07;132!UBERON:0002902;5.89e-07;1!UBERON:0001831;5.89e-07;1!UBERON:0009899;5.89e-07;1!UBERON:0001567;5.89e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.57e-34,20;UBERON:0002619,6.70e-31,22;UBERON:0000956,4.60e-27,25;UBERON:0000203,4.60e-27,25;UBERON:0000073,4.86e-25,53;UBERON:0002616,4.86e-25,53;UBERON:0001869,1.53e-24,32;UBERON:0001049,1.58e-23,56;UBERON:0005068,1.58e-23,56;UBERON:0006241,1.58e-23,56;UBERON:0007135,1.58e-23,56;UBERON:0001893,5.47e-23,34;UBERON:0002780,6.28e-22,41;UBERON:0001890,6.28e-22,41;UBERON:0003080,6.28e-22,41;UBERON:0006240,6.28e-22,41;UBERON:0000955,5.86e-21,68;UBERON:0006238,5.86e-21,68;UBERON:0002791,8.00e-21,32;UBERON:0003528,1.69e-19,34;UBERON:0002020,1.69e-19,34;UBERON:0001017,3.22e-19,81;UBERON:0001016,6.19e-17,89;UBERON:0003075,5.19e-15,82;UBERON:0007284,5.19e-15,82;UBERON:0002346,3.73e-14,86;UBERON:0000200,4.91e-14,6;UBERON:0003056,6.36e-14,61;UBERON:0011216,9.96e-12,223;UBERON:0010371,4.11e-11,104;UBERON:0002021,2.10e-10,5;UBERON:0001872,4.83e-10,5;UBERON:0007023,4.84e-10,114;UBERON:0002108,5.83e-10,4;UBERON:0004121,4.51e-08,171;UBERON:0000924,4.51e-08,171;UBERON:0006601,4.51e-08,171;UBERON:0010314,4.91e-08,132;UBERON:0001870,6.50e-08,3;UBERON:0000025,7.33e-08,192;UBERON:0001871,1.61e-07,6;UBERON:0001831,4.69e-07,1;UBERON:0001567,4.69e-07,1;UBERON:0008801,4.69e-07,1;UBERON:0002902,5.89e-07,1;UBERON:0009899,5.89e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.69716365721711,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.385076685522074,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,1.52925763827023,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0.398495976502139,0.276283915531148,1.0077309914171,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,2.04089815956073,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,2.32216445855572,2.36438095162838,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.884575645033392,1.83309043480088,0,0,0,0.202203398942031,0,0.937057782901357,0,0,0,0,2.41981432097328,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,1.51945910294109,0,0,6.19013684744122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0,1.21499113316049,0,0.551639951094387,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0.513260513652988,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.09823638411767,1.001527445652,0,0.221858103073705,0.558867626472451,0,0,0,0,0,0.936669811613763,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,1.47918486351039,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,4.00285374142735,0,0,0.834979926253974,0,0.478901577171454,1.64093091392604,1.26035848110859,2.28218933131919,0.645902582527404,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.887136517302272,1.2832141077495,0,1.03343398250592,0.887821342714695,1.64092442705466,2.74128883428591,0,0,0,0,0,0,2.04895972216168,0,0,0.342976018874837,2.03909198930495,1.18390992413128,0,0,0.078493092850514,0.471346769748006,0,0.913158720509496,7.98932087508899,0.9555033757741,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,2.0611549059201,6.21781417409574,0,0,0,0,4.2109103423179,0.596852325484105,0,0,0,10.8693247368005,1.15761237161917,1.09279780251979,14.1095188908457,0,11.312474260878,0.196308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.815897882290976,1.30905207102113,0,0,0,0,0,0,0,0.61193297845189,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0.476128862927481,0,0,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0.430333232356058,0,0,0,0,1.25755282949222,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.69716365721711,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.385076685522074,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,1.52925763827023,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0.398495976502139,0.276283915531148,1.0077309914171,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,2.04089815956073,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,2.32216445855572,2.36438095162838,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.884575645033392,1.83309043480088,0,0,0,0.202203398942031,0,0.937057782901357,0,0,0,0,2.41981432097328,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,1.51945910294109,0,0,6.19013684744122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0,1.21499113316049,0,0.551639951094387,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0.513260513652988,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.09823638411767,1.001527445652,0,0.221858103073705,0.558867626472451,0,0,0,0,0,0.936669811613763,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,1.47918486351039,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,4.00285374142735,0,0,0.834979926253974,0,0.478901577171454,1.64093091392604,1.26035848110859,2.28218933131919,0.645902582527404,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.887136517302272,1.2832141077495,0,1.03343398250592,0.887821342714695,1.64092442705466,2.74128883428591,0,0,0,0,0,0,2.04895972216168,0,0,0.342976018874837,2.03909198930495,1.18390992413128,0,0,0.078493092850514,0.471346769748006,0,0.913158720509496,7.98932087508899,0.9555033757741,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,2.0611549059201,6.21781417409574,0,0,0,0,4.2109103423179,0.596852325484105,0,0,0,10.8693247368005,1.15761237161917,1.09279780251979,14.1095188908457,0,11.312474260878,0.196308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.815897882290976,1.30905207102113,0,0,0,0,0,0,0,0.61193297845189,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0.476128862927481,0,0,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0.430333232356058,0,0,0,0,1.25755282949222,0,0,0,0,0,0 | ||
|short_description=p3@SYT13 | |short_description=p3@SYT13 | ||
}} | }} |
Latest revision as of 01:07, 18 September 2015
Short description: | p3@SYT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYT13_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 66bp_to_ENST00000020926_5end |
EntrezGene: | SYT13 |
HGNC: | 14962 |
UniProt: | Q7L8C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.13e-07 | 1 |
enteroendocrine cell | 3.13e-07 | 1 |
type D enteroendocrine cell | 3.13e-07 | 1 |
somatostatin secreting cell | 3.13e-07 | 1 |
pancreatic D cell | 3.13e-07 | 1 |
progenitor cell of endocrine pancreas | 3.13e-07 | 1 |
lung fibroblast | 4.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.02e-12 | 2 |
somatostatinoma | 3.13e-07 | 1 |