FFCP PHASE1:Hg19::chr16:84623794..84623816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23406 | |EntrezGene=23406 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18304 | |HGNC=18304 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_BC020445_5end | |association_with_transcript=-4bp_to_BC020445_5end | ||
|cluster_id=chr16:84623794..84623816,- | |||
|coexpression_cluster_id=C842 | |coexpression_cluster_id=C842 | ||
|description=CAGE_peak_3_at_COTL1_5end | |description=CAGE_peak_3_at_COTL1_5end | ||
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|ontology_enrichment_celltype_v019=CL:0000860;1.87e-30;33!CL:0002057;1.87e-30;33!CL:0000473;8.89e-28;39!CL:0000234;8.89e-28;39!CL:0000576;8.01e-22;48!CL:0000766;3.91e-17;69!CL:0000359;2.22e-07;32 | |ontology_enrichment_celltype_v019=CL:0000860;1.87e-30;33!CL:0002057;1.87e-30;33!CL:0000473;8.89e-28;39!CL:0000234;8.89e-28;39!CL:0000576;8.01e-22;48!CL:0000766;3.91e-17;69!CL:0000359;2.22e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.07e-44,48;CL:0000234,5.07e-44,48;CL:0000860,7.19e-41,42;CL:0002057,7.19e-41,42;CL:0002194,1.35e-33,59;CL:0000576,1.35e-33,59;CL:0000040,1.35e-33,59;CL:0000559,1.35e-33,59;CL:0000766,1.07e-32,72;CL:0002009,7.94e-32,61;CL:0000839,6.86e-28,66;CL:0000557,3.54e-27,67;CL:0000763,2.81e-18,108;CL:0000049,2.81e-18,108;CL:0000738,2.98e-17,136;CL:0002087,7.97e-16,115;CL:0002031,8.92e-13,120;CL:0000048,3.88e-12,427;CL:0000723,2.13e-11,433;CL:0000034,1.85e-10,441;CL:0002032,2.59e-10,161;CL:0000837,2.59e-10,161;CL:0000037,3.46e-10,168;CL:0000988,3.19e-09,177;CL:0002393,5.80e-09,9;CL:0002397,5.80e-09,9;CL:0000222,5.98e-08,121;CL:0000359,7.72e-08,32;CL:0000187,1.27e-07,55;CL:0000192,1.45e-07,43;CL:0000514,1.45e-07,43;CL:0000134,5.44e-07,354;CL:0002320,6.31e-07,361;CL:0000680,8.76e-07,58;CL:0000056,8.76e-07,58;CL:0000355,8.76e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;8.46e-30;42 | |ontology_enrichment_development_v019=CL:0002057;8.46e-30;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.99e-19!167;UBERON:0002371!8.41e-18!80;UBERON:0001474!2.66e-15!86;UBERON:0002390!3.06e-15!102;UBERON:0003061!3.06e-15!102;UBERON:0003081!1.05e-14!216;UBERON:0002193!1.58e-14!112;UBERON:0004765!7.36e-14!101;UBERON:0001434!7.36e-14!101;UBERON:0002405!1.84e-11!115;UBERON:0000926!2.40e-09!448;UBERON:0004120!2.40e-09!448;UBERON:0006603!2.40e-09!448;UBERON:0002384!2.58e-08!375;UBERON:0004290!2.63e-07!70;UBERON:0000486!4.76e-07!82;UBERON:0000914!7.55e-07!83;UBERON:0002329!7.55e-07!83;UBERON:0003077!7.55e-07!83;UBERON:0003059!7.55e-07!83;UBERON:0007282!7.55e-07!83;UBERON:0009618!7.55e-07!83;UBERON:0007285!7.55e-07!83 | |ontology_enrichment_uberon=UBERON:0002204!2.99e-19!167;UBERON:0002371!8.41e-18!80;UBERON:0001474!2.66e-15!86;UBERON:0002390!3.06e-15!102;UBERON:0003061!3.06e-15!102;UBERON:0003081!1.05e-14!216;UBERON:0002193!1.58e-14!112;UBERON:0004765!7.36e-14!101;UBERON:0001434!7.36e-14!101;UBERON:0002405!1.84e-11!115;UBERON:0000926!2.40e-09!448;UBERON:0004120!2.40e-09!448;UBERON:0006603!2.40e-09!448;UBERON:0002384!2.58e-08!375;UBERON:0004290!2.63e-07!70;UBERON:0000486!4.76e-07!82;UBERON:0000914!7.55e-07!83;UBERON:0002329!7.55e-07!83;UBERON:0003077!7.55e-07!83;UBERON:0003059!7.55e-07!83;UBERON:0007282!7.55e-07!83;UBERON:0009618!7.55e-07!83;UBERON:0007285!7.55e-07!83 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p3@COTL1 | |short_description=p3@COTL1 | ||
}} | }} |
Latest revision as of 03:57, 18 September 2015
Short description: | p3@COTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COTL1_5end |
Coexpression cluster: | C842_Neutrophils_CD14CD16_CD14_Eosinophils_migratory_Mesenchymal_Fibroblast |
Association with transcript: | -4bp_to_BC020445_5end |
EntrezGene: | COTL1 |
HGNC: | 18304 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.56e-26 | 76 |
lateral plate mesoderm | 8.60e-25 | 203 |
hematopoietic system | 5.43e-24 | 98 |
blood island | 5.43e-24 | 98 |
bone element | 2.42e-23 | 82 |
musculoskeletal system | 6.15e-23 | 167 |
hemolymphoid system | 1.76e-21 | 108 |
skeletal element | 2.79e-21 | 90 |
immune system | 5.57e-21 | 93 |
mesoderm | 3.60e-19 | 315 |
mesoderm-derived structure | 3.60e-19 | 315 |
presumptive mesoderm | 3.60e-19 | 315 |
skeletal system | 1.63e-18 | 100 |
epithelial vesicle | 2.03e-09 | 78 |
artery | 3.48e-07 | 42 |
arterial blood vessel | 3.48e-07 | 42 |
arterial system | 3.48e-07 | 42 |
somite | 5.40e-07 | 71 |
presomitic mesoderm | 5.40e-07 | 71 |
presumptive segmental plate | 5.40e-07 | 71 |
dermomyotome | 5.40e-07 | 71 |
trunk paraxial mesoderm | 5.40e-07 | 71 |
dense mesenchyme tissue | 5.54e-07 | 73 |
paraxial mesoderm | 9.18e-07 | 72 |
presumptive paraxial mesoderm | 9.18e-07 | 72 |