FFCP PHASE1:Hg19::chr2:173600326..173600344,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11069 | |EntrezGene=11069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16626 | |HGNC=16626 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVE5,Q8WZA2 | |UniProt=E7EVE5,Q8WZA2 | ||
|association_with_transcript=-180bp_to_ENST00000264111,NM_007023,uc002uhu.2,uc002uhv.3_5end | |association_with_transcript=-180bp_to_ENST00000264111,NM_007023,uc002uhu.2,uc002uhv.3_5end | ||
|cluster_id=chr2:173600326..173600344,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_18_at_RAPGEF4_5end | |description=CAGE_peak_18_at_RAPGEF4_5end | ||
|id=chr2:173600326..173600344,+ | |id=chr2:173600326..173600344,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;9.24e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,9.25e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.70e-07;2!UBERON:0006601;5.25e-07;82 | |||
|ontology_enrichment_disease=DOID:3119!1.31e-09!14 | |ontology_enrichment_disease=DOID:3119!1.31e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.98e-14;1!DOID:1357;3.98e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.50e-14,1;DOID:1357,3.50e-14,1 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.49e-28,41;UBERON:0001890,2.49e-28,41;UBERON:0003080,2.49e-28,41;UBERON:0006240,2.49e-28,41;UBERON:0000073,1.70e-26,53;UBERON:0002616,1.70e-26,53;UBERON:0000007,1.27e-25,2;UBERON:0001049,4.90e-25,56;UBERON:0005068,4.90e-25,56;UBERON:0006241,4.90e-25,56;UBERON:0007135,4.90e-25,56;UBERON:0002791,2.59e-23,32;UBERON:0001869,2.59e-23,32;UBERON:0003528,6.10e-22,34;UBERON:0002020,6.10e-22,34;UBERON:0001893,6.10e-22,34;UBERON:0001950,5.21e-21,20;UBERON:0000955,3.76e-20,68;UBERON:0006238,3.76e-20,68;UBERON:0002619,3.67e-19,22;UBERON:0003056,7.74e-19,61;UBERON:0001870,1.94e-17,3;UBERON:0000956,6.37e-17,25;UBERON:0000203,6.37e-17,25;UBERON:0001017,8.62e-17,81;UBERON:0003075,8.62e-17,82;UBERON:0007284,8.62e-17,82;UBERON:0002346,5.87e-16,86;UBERON:0001016,5.11e-15,89;UBERON:0001764,3.50e-14,1;UBERON:0001825,3.50e-14,1;UBERON:0002022,5.85e-14,1;UBERON:0001882,1.10e-13,1;UBERON:0005403,1.10e-13,1;UBERON:0000369,1.83e-13,4;UBERON:0002435,1.83e-13,4;UBERON:0000204,1.83e-13,4;UBERON:0010082,1.83e-13,4;UBERON:0003296,2.51e-13,4;UBERON:0010133,2.51e-13,4;UBERON:0010371,5.45e-13,104;UBERON:0010314,5.82e-10,132;UBERON:0009663,4.42e-08,7;UBERON:0001871,5.28e-08,6;UBERON:0001894,5.28e-08,7;UBERON:0006222,5.28e-08,7;UBERON:0007023,8.05e-08,114;UBERON:0006955,9.25e-08,2;UBERON:0004801,9.25e-08,2;UBERON:0000025,9.26e-08,192;UBERON:0001873,1.20e-07,2;UBERON:0010122,1.20e-07,2;UBERON:0002702,1.36e-07,2;UBERON:0004121,2.84e-07,171;UBERON:0000924,2.84e-07,171;UBERON:0006601,2.84e-07,171 | |||
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|short_description=p18@RAPGEF4 | |short_description=p18@RAPGEF4 | ||
}} | }} |
Latest revision as of 05:33, 18 September 2015
Short description: | p18@RAPGEF4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RAPGEF4_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -180bp_to_ENST00000264111, NM_007023, uc002uhu.2, uc002uhv.3_5end |
EntrezGene: | RAPGEF4 |
HGNC: | 16626 |
UniProt: | E7EVE5Q8WZA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 9.25e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.50e-14 | 1 |
maxillary sinus cancer | 3.50e-14 | 1 |