FFCP PHASE1:Hg19::chr15:60296504..60296518,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27023 | |EntrezGene=27023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3799 | |HGNC=3799 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_ENST00000560857_5end | |association_with_transcript=71bp_to_ENST00000560857_5end | ||
|cluster_id=chr15:60296504..60296518,+ | |||
|description=CAGE_peak_3_at_FOXB1_5end | |description=CAGE_peak_3_at_FOXB1_5end | ||
|id=chr15:60296504..60296518,+ | |id=chr15:60296504..60296518,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.59e-18!5;CL:0002541!2.20e-11!3 | |ontology_enrichment_celltype=CL:0002322!1.59e-18!5;CL:0002541!2.20e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.91e-25;5!CL:0002541;1.25e-11;3!CL:0002321;1.26e-08;15!CL:0000148;1.09e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.18e-25,5;CL:0002541,1.77e-11,3;CL:0000148,9.60e-08,10;CL:0000541,9.60e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.46e-25;3!UBERON:0003057;9.46e-25;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.49e-09;1!DOID:1357;1.49e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.12e-09,1;DOID:1357,1.12e-09,1 | |||
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| ||
|short_description=p3@FOXB1 | |short_description=p3@FOXB1 | ||
}} | }} |
Latest revision as of 09:37, 18 September 2015
Short description: | p3@FOXB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_ENST00000560857_5end |
EntrezGene: | FOXB1 |
HGNC: | 3799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.18e-25 | 5 |
chorionic membrane mesenchymal stem cell | 1.77e-11 | 3 |
melanocyte | 9.60e-08 | 10 |
melanoblast | 9.60e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
brainstem | 7.00e-34 | 6 |
posterior neural tube | 1.75e-33 | 15 |
chordal neural plate | 1.75e-33 | 15 |
medulla oblongata | 6.86e-25 | 3 |
myelencephalon | 6.86e-25 | 3 |
future myelencephalon | 6.86e-25 | 3 |
spinal cord | 1.12e-24 | 3 |
dorsal region element | 1.12e-24 | 3 |
dorsum | 1.12e-24 | 3 |
locus ceruleus | 1.37e-17 | 2 |
brainstem nucleus | 1.37e-17 | 2 |
hindbrain nucleus | 1.37e-17 | 2 |
segmental subdivision of hindbrain | 6.57e-17 | 12 |
hindbrain | 6.57e-17 | 12 |
presumptive hindbrain | 6.57e-17 | 12 |
segmental subdivision of nervous system | 1.34e-15 | 13 |
neural tube | 1.44e-12 | 56 |
neural rod | 1.44e-12 | 56 |
future spinal cord | 1.44e-12 | 56 |
neural keel | 1.44e-12 | 56 |
pons | 4.86e-12 | 3 |
egg chorion | 1.77e-11 | 3 |
central nervous system | 6.62e-10 | 81 |
maxillary sinus | 1.12e-09 | 1 |
paranasal sinus | 1.12e-09 | 1 |
nervous system | 9.32e-09 | 89 |
neural nucleus | 1.12e-08 | 9 |
nucleus of brain | 1.12e-08 | 9 |
neural plate | 3.92e-08 | 82 |
presumptive neural plate | 3.92e-08 | 82 |
neurectoderm | 1.10e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.12e-09 | 1 |
maxillary sinus cancer | 1.12e-09 | 1 |