FFCP PHASE1:Hg19::chr4:72052624..72052640,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8671 | |EntrezGene=8671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11030 | |HGNC=11030 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6R1,A5JJ20 | |UniProt=Q9Y6R1,A5JJ20 | ||
|association_with_transcript=-362bp_to_ENST00000264485,ENST00000425175,NM_001098484,NM_001134742,uc003hfy.2,uc010iib.2,uc010iic.2_5end | |association_with_transcript=-362bp_to_ENST00000264485,ENST00000425175,NM_001098484,NM_001134742,uc003hfy.2,uc010iib.2,uc010iic.2_5end | ||
|cluster_id=chr4:72052624..72052640,+ | |||
|coexpression_cluster_id=C1846 | |||
|description=CAGE_peak_7_at_SLC4A4_5end | |description=CAGE_peak_7_at_SLC4A4_5end | ||
|id=chr4:72052624..72052640,+ | |id=chr4:72052624..72052640,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.48e-07;1!UBERON:0010115;1.48e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.82e-28!57;UBERON:0005068!7.82e-28!57;UBERON:0006241!7.82e-28!57;UBERON:0007135!7.82e-28!57;UBERON:0007023!5.19e-25!115;UBERON:0003075!9.03e-24!86;UBERON:0007284!9.03e-24!86;UBERON:0002616!8.94e-23!59;UBERON:0005743!3.40e-22!86;UBERON:0002346!7.46e-22!90;UBERON:0001017!9.25e-22!82;UBERON:0000073!2.49e-21!94;UBERON:0001016!2.49e-21!94;UBERON:0003080!4.40e-21!42;UBERON:0002780!3.12e-20!41;UBERON:0001890!3.12e-20!41;UBERON:0006240!3.12e-20!41;UBERON:0000955!3.61e-19!69;UBERON:0006238!3.61e-19!69;UBERON:0003056!1.25e-18!61;UBERON:0002020!3.56e-18!34;UBERON:0003528!3.56e-18!34;UBERON:0001893!8.88e-18!34;UBERON:0002791!2.83e-17!33;UBERON:0001869!1.66e-16!32;UBERON:0002619!5.31e-16!22;UBERON:0000956!1.03e-14!25;UBERON:0000203!1.03e-14!25;UBERON:0001950!3.20e-14!20;UBERON:0000475!8.21e-13!365;UBERON:0000153!3.75e-11!129;UBERON:0007811!3.75e-11!129;UBERON:0000033!1.28e-10!123;UBERON:0004121!2.67e-10!169;UBERON:0000483!4.98e-10!309;UBERON:0000119!5.32e-10!312;UBERON:0000924!1.23e-09!173;UBERON:0006601!1.23e-09!173;UBERON:0000481!2.98e-09!347;UBERON:0002298!7.85e-09!8;UBERON:0000025!1.03e-08!194;UBERON:0003076!6.77e-08!15;UBERON:0003057!6.77e-08!15;UBERON:0000477!8.22e-08!286;UBERON:0004111!1.15e-07!241;UBERON:0000062!1.15e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;2.90e-19;3!UBERON:0005290;2.90e-19;3!UBERON:0000007;1.97e-13;2!UBERON:0002108;2.68e-12;4!UBERON:0002298;6.65e-10;6!UBERON:0002114;7.82e-10;2!UBERON:0004733;1.77e-08;12!UBERON:0002028;1.77e-08;12!UBERON:0004732;7.80e-08;13!UBERON:0002363;1.48e-07;1!UBERON:0003296;3.82e-07;4!UBERON:0010133;3.82e-07;4!UBERON:0000073;8.02e-07;53!UBERON:0002616;8.02e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,8.46e-19,3;UBERON:0005290,8.46e-19,3;UBERON:0010096,8.46e-19,3;UBERON:0000007,1.12e-13,2;UBERON:0002108,1.87e-12,4;UBERON:0003076,4.77e-10,15;UBERON:0003057,4.77e-10,15;UBERON:0002114,8.38e-10,2;UBERON:0002298,1.12e-09,6;UBERON:0001049,3.62e-09,56;UBERON:0005068,3.62e-09,56;UBERON:0006241,3.62e-09,56;UBERON:0007135,3.62e-09,56;UBERON:0001016,5.91e-09,89;UBERON:0001017,1.45e-08,81;UBERON:0003075,1.90e-08,82;UBERON:0007284,1.90e-08,82;UBERON:0004733,2.64e-08,12;UBERON:0002028,2.64e-08,12;UBERON:0007277,2.64e-08,12;UBERON:0002346,5.85e-08,86;UBERON:0007023,7.00e-08,114;UBERON:0000073,7.05e-08,53;UBERON:0002616,7.05e-08,53;UBERON:0004732,1.13e-07,13;UBERON:0002363,1.15e-07,1;UBERON:0007645,1.15e-07,1;UBERON:0007647,1.15e-07,1;UBERON:0010115,1.15e-07,1;UBERON:0010314,2.08e-07,132;UBERON:0003296,2.89e-07,4;UBERON:0010133,2.89e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.662045904066094,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.919463387397059,0,0,1.97328599257748,0.213557388818567,0,1.20036438433761,0,0,0,0.675105328965065,0.292311015483596,0.504867548488229,0,0.161646056818812,0.355009592516614,0.503760491138201,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0.882926198829301,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.904318131178758,0,0.099972991182057,0,0,0,2.39624855491583,1.14861935834114,0,0.289562613335158,0,0,0,0,0.215627574859517,0.128343036279748,2.54094624222463,0,0,0.502548796003046,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.553107505625109,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0,0.744323423456331,0.460385919864187,0,0.768834895534206,0,0.160853921143607,0,0.308419387605311,0.177561725313127,1.23190734020714,0,0.581051892299796,0.120859449591622,0,0,0.918515585316854,0,0.524497659837696,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.272999822815972,1.55545975149084,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0.703347082052564,0,0,6.3337622438398,0,0,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0.969332746095218,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0.689486746482929,0,0.173624994933292,0,0.361789315876224,0,0.552896299656123,1.18219047581419,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,1.59223616106011,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,2.41981432097328,0.61214552326098,1.5796644907122,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0.176512253383001,0.677942222341597,0,0,0.189932387867636,0,0.0801588202515337,1.06726497369676,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.268733889946905,0.360299883542404,0,0,0,0,0.295282444544246,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.485996453264197,0,0.315222829196793,0.681909645754975,0,0,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0,0.511164065356265,0,0.439656701034247,0,0.517131825446202,0.39669780522807,0.171086837884329,0,0.106787412567695,1.88645166119599,0.828478110694391,0,0,0,0,0.544017803369474,0.2506898940227,0,0.327872630709804,0,0.886068179966986,0.732157589411779,0.3755727921195,1.14681839138014,1.10929051536852,1.17983165588629,0,0,0.151649117541648,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0,0,0,0.552317850755522,0,0,0,0,0.157265941855896,0,0,0,0,1.67593475391973,0.318004350653419,0,0,0,0.918736432059601,0.834979926253974,0,0.319267718114302,0.615349092722265,0.756215088665154,0.760729777106397,0.484426936895553,0,0,0,0,0,1.90691047733584,0,0,0.0752103283492573,0,7.03362610109783,0,0.327543835020193,0,0.202612753855184,0.781078098613847,0.620060389503552,0.317079050969534,1.64092442705466,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,1.82089681270989,1.36597314810779,0.0887023701626388,0,0,0.883606528698812,0.263091094251396,0.118193840883968,0.111231401892069,0.549451649953598,0.157115589916002,0,0,0.215927591218621,0.9555033757741,1.00067161847319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,1.92935395269862,0.437119121007915,0,0,0,0.785233868459781,1.48523200163543,0.8453114551668,0.849635573439084,0.0939839179798536,0,0,0,0,0,0,0,0.4300187494543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| ||
|short_description=p7@SLC4A4 | |short_description=p7@SLC4A4 | ||
}} | }} |
Latest revision as of 11:46, 18 September 2015
Short description: | p7@SLC4A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC4A4_5end |
Coexpression cluster: | C1846_pancreas_anaplastic_duodenum_temporal_spinal_gall_locus |
Association with transcript: | -362bp_to_ENST00000264485, ENST00000425175, NM_001098484, NM_001134742, uc003hfy.2, uc010iib.2, uc010iic.2_5end |
EntrezGene: | SLC4A4 |
HGNC: | 11030 |
UniProt: | Q9Y6R1A5JJ20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 8.46e-19 | 3 |
myelencephalon | 8.46e-19 | 3 |
future myelencephalon | 8.46e-19 | 3 |
pituitary gland | 1.12e-13 | 2 |
small intestine | 1.87e-12 | 4 |
posterior neural tube | 4.77e-10 | 15 |
chordal neural plate | 4.77e-10 | 15 |
duodenum | 8.38e-10 | 2 |
brainstem | 1.12e-09 | 6 |
neural tube | 3.62e-09 | 56 |
neural rod | 3.62e-09 | 56 |
future spinal cord | 3.62e-09 | 56 |
neural keel | 3.62e-09 | 56 |
nervous system | 5.91e-09 | 89 |
central nervous system | 1.45e-08 | 81 |
neural plate | 1.90e-08 | 82 |
presumptive neural plate | 1.90e-08 | 82 |
segmental subdivision of hindbrain | 2.64e-08 | 12 |
hindbrain | 2.64e-08 | 12 |
presumptive hindbrain | 2.64e-08 | 12 |
neurectoderm | 5.85e-08 | 86 |
adult organism | 7.00e-08 | 114 |
regional part of nervous system | 7.05e-08 | 53 |
regional part of brain | 7.05e-08 | 53 |
segmental subdivision of nervous system | 1.13e-07 | 13 |
dura mater | 1.15e-07 | 1 |
future meninx | 1.15e-07 | 1 |
ectomeninx | 1.15e-07 | 1 |
future dura mater | 1.15e-07 | 1 |
structure with developmental contribution from neural crest | 2.08e-07 | 132 |
gland of diencephalon | 2.89e-07 | 4 |
neuroendocrine gland | 2.89e-07 | 4 |