FFCP PHASE1:Hg19::chr3:48541537..48541621,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51246 | |EntrezGene=51246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30376 | |HGNC=30376 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCE2,C9IZ46,F8WFD9,F8WDS1,F8W9N8 | |UniProt=F8WCE2,C9IZ46,F8WFD9,F8WDS1,F8W9N8 | ||
|association_with_transcript=0bp_to_ENST00000415268,ENST00000417841,ENST00000424965,ENST00000441507,ENST00000443308_5end | |association_with_transcript=0bp_to_ENST00000415268,ENST00000417841,ENST00000424965,ENST00000441507,ENST00000443308_5end | ||
|cluster_id=chr3:48541537..48541621,- | |||
|description=CAGE_peak_3_at_SHISA5_5end | |description=CAGE_peak_3_at_SHISA5_5end | ||
|id=chr3:48541537..48541621,- | |id=chr3:48541537..48541621,- | ||
|ontology_enrichment_celltype=CL:0000055!3.52e-15!180;CL:0000222!4.52e-14!119;CL:0002321!3.22e-12!248;CL:0000220!3.89e-12!246;CL:0000183!3.04e-10!59;CL:0000115!6.94e-09!35;CL:0002078!9.68e-09!44;CL:0000680!2.14e-08!57;CL:0000056!2.14e-08!57;CL:0000355!2.14e-08!57;CL:0000187!3.58e-08!54;CL:0000393!3.88e-08!60;CL:0000211!3.88e-08!60;CL:0000192!2.69e-07!42;CL:0000514!2.69e-07!42;CL:0002139!3.64e-07!24;CL:0000213!7.90e-07!57;CL:0000215!7.90e-07!57 | |ontology_enrichment_celltype=CL:0000055!3.52e-15!180;CL:0000222!4.52e-14!119;CL:0002321!3.22e-12!248;CL:0000220!3.89e-12!246;CL:0000183!3.04e-10!59;CL:0000115!6.94e-09!35;CL:0002078!9.68e-09!44;CL:0000680!2.14e-08!57;CL:0000056!2.14e-08!57;CL:0000355!2.14e-08!57;CL:0000187!3.58e-08!54;CL:0000393!3.88e-08!60;CL:0000211!3.88e-08!60;CL:0000192!2.69e-07!42;CL:0000514!2.69e-07!42;CL:0002139!3.64e-07!24;CL:0000213!7.90e-07!57;CL:0000215!7.90e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.41e-08;36!CL:0002139;3.37e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.24e-14,121;CL:0002321,1.12e-12,250;CL:0000115,3.54e-09,36;CL:0002078,5.05e-09,45;CL:0000680,1.14e-08,58;CL:0000056,1.14e-08,58;CL:0000355,1.14e-08,58;CL:0000187,1.90e-08,55;CL:0000393,2.09e-08,61;CL:0000211,2.09e-08,61;CL:0000192,1.42e-07,43;CL:0000514,1.42e-07,43;CL:0002139,3.64e-07,24;CL:0000213,4.46e-07,58;CL:0000215,4.46e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!8.22e-19!110;UBERON:0001009!1.15e-18!113;UBERON:0000468!1.19e-17!659;UBERON:0002049!1.22e-15!79;UBERON:0007798!1.22e-15!79;UBERON:0000467!4.24e-14!625;UBERON:0000480!6.91e-14!626;UBERON:0004872!7.49e-13!84;UBERON:0000055!2.85e-12!69;UBERON:0003914!3.87e-12!118;UBERON:0000475!1.54e-10!365;UBERON:0001981!1.96e-10!60;UBERON:0007500!1.96e-10!60;UBERON:0004537!1.96e-10!60;UBERON:0006965!1.96e-10!60;UBERON:0000922!5.56e-10!612;UBERON:0000119!1.71e-09!312;UBERON:0000483!1.76e-09!309;UBERON:0002050!3.58e-09!605;UBERON:0005423!3.58e-09!605;UBERON:0000477!4.14e-09!286;UBERON:0000923!4.35e-09!604;UBERON:0005291!4.35e-09!604;UBERON:0006598!4.35e-09!604;UBERON:0002532!4.35e-09!604;UBERON:0000490!7.51e-09!138;UBERON:0005256!8.73e-09!143;UBERON:0004111!9.83e-09!241;UBERON:0002100!4.42e-08!216;UBERON:0001637!4.56e-08!42;UBERON:0003509!4.56e-08!42;UBERON:0004572!4.56e-08!42;UBERON:0000486!6.78e-08!82;UBERON:0000481!6.84e-08!347;UBERON:0000926!1.06e-07!448;UBERON:0004120!1.06e-07!448;UBERON:0006603!1.06e-07!448;UBERON:0001134!2.02e-07!61;UBERON:0002036!2.02e-07!61;UBERON:0003082!2.02e-07!61;UBERON:0002385!2.73e-07!63;UBERON:0001015!2.73e-07!63;UBERON:0000383!2.73e-07!63;UBERON:0004290!6.46e-07!70;UBERON:0004573!7.33e-07!33;UBERON:0004571!7.33e-07!33 | |ontology_enrichment_uberon=UBERON:0004535!8.22e-19!110;UBERON:0001009!1.15e-18!113;UBERON:0000468!1.19e-17!659;UBERON:0002049!1.22e-15!79;UBERON:0007798!1.22e-15!79;UBERON:0000467!4.24e-14!625;UBERON:0000480!6.91e-14!626;UBERON:0004872!7.49e-13!84;UBERON:0000055!2.85e-12!69;UBERON:0003914!3.87e-12!118;UBERON:0000475!1.54e-10!365;UBERON:0001981!1.96e-10!60;UBERON:0007500!1.96e-10!60;UBERON:0004537!1.96e-10!60;UBERON:0006965!1.96e-10!60;UBERON:0000922!5.56e-10!612;UBERON:0000119!1.71e-09!312;UBERON:0000483!1.76e-09!309;UBERON:0002050!3.58e-09!605;UBERON:0005423!3.58e-09!605;UBERON:0000477!4.14e-09!286;UBERON:0000923!4.35e-09!604;UBERON:0005291!4.35e-09!604;UBERON:0006598!4.35e-09!604;UBERON:0002532!4.35e-09!604;UBERON:0000490!7.51e-09!138;UBERON:0005256!8.73e-09!143;UBERON:0004111!9.83e-09!241;UBERON:0002100!4.42e-08!216;UBERON:0001637!4.56e-08!42;UBERON:0003509!4.56e-08!42;UBERON:0004572!4.56e-08!42;UBERON:0000486!6.78e-08!82;UBERON:0000481!6.84e-08!347;UBERON:0000926!1.06e-07!448;UBERON:0004120!1.06e-07!448;UBERON:0006603!1.06e-07!448;UBERON:0001134!2.02e-07!61;UBERON:0002036!2.02e-07!61;UBERON:0003082!2.02e-07!61;UBERON:0002385!2.73e-07!63;UBERON:0001015!2.73e-07!63;UBERON:0000383!2.73e-07!63;UBERON:0004290!6.46e-07!70;UBERON:0004573!7.33e-07!33;UBERON:0004571!7.33e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;7.39e-07;74!UBERON:0002049;7.80e-07;75!UBERON:0007798;7.80e-07;75!UBERON:0000055;7.95e-07;65 | |||
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| ||
|short_description=p3@SHISA5 | |short_description=p3@SHISA5 | ||
}} | }} |
Latest revision as of 14:22, 18 September 2015
Short description: | p3@SHISA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SHISA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000415268, ENST00000417841, ENST00000424965, ENST00000441507, ENST00000443308_5end |
EntrezGene: | SHISA5 |
HGNC: | 30376 |
UniProt: | F8WCE2C9IZ46F8WFD9F8WDS1F8W9N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.24e-14 | 121 |
embryonic cell | 1.12e-12 | 250 |
endothelial cell | 3.54e-09 | 36 |
meso-epithelial cell | 5.05e-09 | 45 |
muscle precursor cell | 1.14e-08 | 58 |
myoblast | 1.14e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.14e-08 | 58 |
muscle cell | 1.90e-08 | 55 |
electrically responsive cell | 2.09e-08 | 61 |
electrically active cell | 2.09e-08 | 61 |
smooth muscle cell | 1.42e-07 | 43 |
smooth muscle myoblast | 1.42e-07 | 43 |
endothelial cell of vascular tree | 3.64e-07 | 24 |
lining cell | 4.46e-07 | 58 |
barrier cell | 4.46e-07 | 58 |