FFCP PHASE1:Hg19::chr7:42192043..42192057,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2737 | |EntrezGene=2737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4319 | |HGNC=4319 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000479210,uc011kbg.1_5end | |||
|cluster_id=chr7:42192043..42192057,- | |||
|coexpression_cluster_id=C545 | |||
|description=CAGE_peak_10_at_GLI3_5end | |||
|id=chr7:42192043..42192057,- | |||
|ontology_enrichment_celltype=CL:0002605!2.45e-12!3;CL:0000047!1.00e-11!8;CL:0002319!1.03e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.31e-34;3!CL:0002319;1.28e-25;25!CL:0000047;1.87e-23;2!CL:0000540;2.80e-17;6!CL:0000404;2.80e-17;6!CL:0000128;4.06e-15;7!CL:0000126;4.06e-15;7!CL:0000127;4.06e-15;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.24e-34,3;CL:0000047,1.39e-34,8;CL:0002319,1.24e-25,25;CL:0000540,3.70e-17,6;CL:0000031,3.70e-17,6;CL:0000404,3.70e-17,6;CL:0000128,3.13e-15,7;CL:0000126,3.13e-15,7;CL:0000127,3.13e-15,7;CL:0002453,3.13e-15,7;CL:0000133,7.20e-11,59;CL:0000221,8.47e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000031;2.80e-17;6!CL:0000133;1.38e-08;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.87e-62!34;UBERON:0001869!2.77e-61!32;UBERON:0002791!4.19e-59!33;UBERON:0002020!3.99e-57!34;UBERON:0003528!3.99e-57!34;UBERON:0000956!1.82e-55!25;UBERON:0000203!1.82e-55!25;UBERON:0005743!3.26e-55!86;UBERON:0001017!5.47e-55!82;UBERON:0002780!1.10e-54!41;UBERON:0001890!1.10e-54!41;UBERON:0006240!1.10e-54!41;UBERON:0003080!3.03e-53!42;UBERON:0001049!1.72e-50!57;UBERON:0005068!1.72e-50!57;UBERON:0006241!1.72e-50!57;UBERON:0007135!1.72e-50!57;UBERON:0000073!3.63e-49!94;UBERON:0001016!3.63e-49!94;UBERON:0002616!1.55e-48!59;UBERON:0000955!8.92e-46!69;UBERON:0006238!8.92e-46!69;UBERON:0002619!2.52e-45!22;UBERON:0001950!8.06e-45!20;UBERON:0003056!9.66e-44!61;UBERON:0003075!1.06e-40!86;UBERON:0007284!1.06e-40!86;UBERON:0002346!1.61e-38!90;UBERON:0000153!1.96e-29!129;UBERON:0007811!1.96e-29!129;UBERON:0000033!1.96e-29!123;UBERON:0004121!2.15e-26!169;UBERON:0000924!1.46e-25!173;UBERON:0006601!1.46e-25!173;UBERON:0007023!2.47e-24!115;UBERON:0001872!8.07e-18!5;UBERON:0000200!8.49e-15!6;UBERON:0000025!2.74e-12!194;UBERON:0002021!2.33e-11!5;UBERON:0000064!6.55e-11!219;UBERON:0001871!6.79e-11!7;UBERON:0000483!1.79e-08!309;UBERON:0000369!2.10e-08!4;UBERON:0002435!2.10e-08!4;UBERON:0000204!2.10e-08!4;UBERON:0010082!2.10e-08!4;UBERON:0004111!2.32e-08!241;UBERON:0001870!2.39e-08!2;UBERON:0000119!2.63e-08!312;UBERON:0000477!1.04e-07!286;UBERON:0002298!7.08e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.66e-33;25!UBERON:0000203;2.66e-33;25!UBERON:0001893;6.09e-29;34!UBERON:0001869;2.42e-28;32!UBERON:0002791;1.75e-23;32!UBERON:0003528;4.93e-23;34!UBERON:0002020;4.93e-23;34!UBERON:0001950;1.78e-18;20!UBERON:0002619;7.65e-17;22!UBERON:0002780;8.72e-17;41!UBERON:0001890;8.72e-17;41!UBERON:0000955;1.29e-12;68!UBERON:0000073;1.72e-12;53!UBERON:0002616;1.72e-12;53!UBERON:0002902;2.32e-12;1!UBERON:0002022;2.32e-12;1!UBERON:0009899;2.32e-12;1!UBERON:0007190;2.32e-12;1!UBERON:0001017;2.07e-11;75!UBERON:0001016;6.40e-09;83!UBERON:0001871;3.24e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.25e-33,25;UBERON:0000203,2.25e-33,25;UBERON:0001869,4.14e-32,32;UBERON:0001017,4.98e-32,81;UBERON:0001893,3.31e-30,34;UBERON:0001016,1.06e-28,89;UBERON:0002791,4.36e-26,32;UBERON:0002780,5.68e-25,41;UBERON:0001890,5.68e-25,41;UBERON:0003080,5.68e-25,41;UBERON:0006240,5.68e-25,41;UBERON:0003528,1.54e-24,34;UBERON:0002020,1.54e-24,34;UBERON:0003056,4.51e-20,61;UBERON:0000073,3.79e-19,53;UBERON:0002616,3.79e-19,53;UBERON:0001950,1.84e-18,20;UBERON:0001049,4.50e-18,56;UBERON:0005068,4.50e-18,56;UBERON:0006241,4.50e-18,56;UBERON:0007135,4.50e-18,56;UBERON:0000955,1.24e-17,68;UBERON:0006238,1.24e-17,68;UBERON:0002619,7.88e-17,22;UBERON:0004121,2.95e-16,171;UBERON:0000924,2.95e-16,171;UBERON:0006601,2.95e-16,171;UBERON:0003075,1.28e-14,82;UBERON:0007284,1.28e-14,82;UBERON:0002346,7.04e-14,86;UBERON:0002022,2.46e-12,1;UBERON:0002902,2.75e-12,1;UBERON:0009899,2.75e-12,1;UBERON:0007190,4.31e-12,1;UBERON:0011216,6.58e-12,223;UBERON:0010371,3.08e-11,104;UBERON:0010314,1.52e-08,132;UBERON:0001871,3.24e-07,6 | |||
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| ||
|short_description=p10@GLI3 | |||
}} | }} |
Latest revision as of 14:52, 18 September 2015
Short description: | p10@GLI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GLI3_5end |
Coexpression cluster: | C545_Astrocyte_Neural_Neurons_parietal_neuroectodermal_occipital_temporal |
Association with transcript: | 0bp_to_ENST00000479210, uc011kbg.1_5end |
EntrezGene: | GLI3 |
HGNC: | 4319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.24e-34 | 3 |
neuronal stem cell | 1.39e-34 | 8 |
neural cell | 1.24e-25 | 25 |
neuron | 3.70e-17 | 6 |
neuroblast | 3.70e-17 | 6 |
electrically signaling cell | 3.70e-17 | 6 |
oligodendrocyte | 3.13e-15 | 7 |
macroglial cell | 3.13e-15 | 7 |
astrocyte | 3.13e-15 | 7 |
oligodendrocyte precursor cell | 3.13e-15 | 7 |
neurectodermal cell | 7.20e-11 | 59 |
ectodermal cell | 8.47e-09 | 72 |