FFCP PHASE1:Hg19::chr6:4032193..4032197,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8899 | |EntrezGene=8899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17346 | |HGNC=17346 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=400bp_to_ENST00000489943_5end | |association_with_transcript=400bp_to_ENST00000489943_5end | ||
|cluster_id=chr6:4032193..4032197,+ | |||
|description=CAGE_peak_8_at_PRPF4B_5end | |description=CAGE_peak_8_at_PRPF4B_5end | ||
|id=chr6:4032193..4032197,+ | |id=chr6:4032193..4032197,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000624;2.31e-09;6!CL:0000623;6.89e-09;3!CL:0000898;1.49e-08;3!CL:0000791;5.73e-08;18!CL:0000789;5.73e-08;18!CL:0002419;5.73e-08;18!CL:0000895;4.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.72e-09,6;CL:0000623,5.47e-09,3;CL:0000825,5.47e-09,3;CL:0000898,1.88e-08,3;CL:0000791,6.02e-08,18;CL:0000789,6.02e-08,18;CL:0002420,6.02e-08,18;CL:0002419,6.02e-08,18;CL:0000790,6.02e-08,18;CL:0000810,6.12e-07,1;CL:0000895,6.12e-07,1;CL:0002436,6.12e-07,1;CL:0002427,6.12e-07,1;CL:0002428,6.12e-07,1;CL:0002429,6.12e-07,1;CL:0002433,6.12e-07,1;CL:0002431,6.12e-07,1;CL:0002432,6.12e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;5.73e-08;18!CL:0002427;4.97e-07;1!UBERON:0005425;4.97e-07;1!UBERON:0003099;4.97e-07;1!UBERON:0003852;4.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;4.97e-07;1!UBERON:0000941;4.97e-07;1!UBERON:0002171;4.97e-07;1!UBERON:0005705;4.97e-07;1!UBERON:0001785;4.97e-07;1!UBERON:0002464;4.97e-07;1!UBERON:0004904;4.97e-07;1!UBERON:0008193;4.97e-07;1!UBERON:0001021;4.97e-07;1!UBERON:0010912;4.97e-07;1!UBERON:0006518;4.97e-07;1!UBERON:0008949;4.97e-07;1!UBERON:0002514;4.97e-07;1!UBERON:0003457;4.97e-07;1!UBERON:0008907;4.97e-07;1!UBERON:0008001;4.97e-07;1!UBERON:0007213;4.97e-07;1!UBERON:0009891;4.97e-07;1!UBERON:0007914;4.97e-07;1!UBERON:0007375;4.97e-07;1!UBERON:0003323;4.97e-07;1!UBERON:0010258;4.97e-07;1!UBERON:0000101;4.97e-07;1!UBERON:0005253;4.97e-07;1!UBERON:0007842;4.97e-07;1!UBERON:0002167;4.97e-07;1!UBERON:0002397;4.97e-07;1!UBERON:0003113;4.97e-07;1!UBERON:0003277;4.97e-07;1!UBERON:0001709;4.97e-07;1!UBERON:0002244;4.97e-07;1!UBERON:0005620;4.97e-07;1!UBERON:0010364;4.97e-07;1!UBERON:0004288;4.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,3.60e-07,1;UBERON:0000941,3.82e-07,1;UBERON:0001785,3.82e-07,1;UBERON:0002464,3.82e-07,1;UBERON:0004904,3.82e-07,1;UBERON:0001021,3.82e-07,1;UBERON:0003902,3.82e-07,1;UBERON:0005425,3.82e-07,1;UBERON:0002171,4.85e-07,1;UBERON:0006518,4.85e-07,1;UBERON:0008949,4.85e-07,1;UBERON:0000101,4.85e-07,1;UBERON:0002167,4.85e-07,1;UBERON:0005705,9.73e-07,1;UBERON:0008193,9.73e-07,1;UBERON:0010912,9.73e-07,1;UBERON:0002514,9.73e-07,1;UBERON:0003457,9.73e-07,1;UBERON:0008907,9.73e-07,1;UBERON:0008001,9.73e-07,1;UBERON:0007213,9.73e-07,1;UBERON:0009891,9.73e-07,1;UBERON:0007914,9.73e-07,1;UBERON:0009292,9.73e-07,1;UBERON:0003099,9.73e-07,1;UBERON:0007375,9.73e-07,1;UBERON:0003323,9.73e-07,1;UBERON:0010258,9.73e-07,1;UBERON:0007842,9.73e-07,1;UBERON:0009494,9.73e-07,1;UBERON:0010042,9.73e-07,1;UBERON:0010045,9.73e-07,1;UBERON:0010259,9.73e-07,1;UBERON:0010359,9.73e-07,1;UBERON:0009526,9.73e-07,1;UBERON:0002397,9.73e-07,1;UBERON:0003113,9.73e-07,1;UBERON:0003277,9.73e-07,1;UBERON:0001709,9.73e-07,1;UBERON:0004066,9.73e-07,1;UBERON:0002244,9.73e-07,1;UBERON:0005620,9.73e-07,1;UBERON:0004362,9.73e-07,1;UBERON:0010364,9.73e-07,1;UBERON:0010046,9.73e-07,1;UBERON:0005868,9.73e-07,1;UBERON:0007238,9.73e-07,1;UBERON:0004288,9.73e-07,1;UBERON:0004068,9.73e-07,1;UBERON:0010334,9.73e-07,1;UBERON:0003852,9.73e-07,1;UBERON:0010253,9.73e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.684372125364421,0.125542639594803,0.382067028739756,0.57470412614962,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0.802177789880567,1.95309783644267,0.223915474239924,0,0,0.145398238779565,0.755751887377619,0,0,0.411167888021826,0,0,0.256160706529101,0.945928919554341,0,0,0,0.941211697713023,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.659702600373432,0.598390972864896,0,0.290209238628584,0,0,2.00998932205395,0,0.65156653411535,0,0,0,0,0.425208599930087,0.209658645508376,0.44931452458598,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,1.09227722252426,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0.393419540227666,3.53709686474248,0.822405995998037,0.334372990781356,0.977766799900771,0,0,0.334231370655521,1.17842362989935,1.10766947291811,0.541607727530031,0.512365278902701,0.130059347559878,0,0,0.579606171470105,0.444859689486181,1.07016331235885,1.04535523804977,0.339928028092699,1.14966148080576,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0.473554504088034,0.821127996921047,0.201606743224732,2.40696176205157,1.30341963494519,0,1.34140171940727,0,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.614843499851882,0,0,0,0,0,0.26591592103773,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0.662045904066094,0,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0.597794722207204,0,0,0,0.204154171254893,0.368502951935304,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0.769494313892781,0,0,0,0,0,0,0,0.441463099414651,0.491953754172454,0.343135620597051,0,0,0.402115889646523,0,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0.207328115540772,0.144119953416961,0,0.190493682876507,0,0,0,0.308482478109971,0.600686115687835,0.571652865261156,0,0,0.07333828582095,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,2.10833939483032,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0.224170287987055,0.591092280605782,1.50939302401662,3.08023287071396,0.254094624222463,0,0,0.335032530668698,0,0.749007023947182,2.99161459204025,0,0.12269149171914,0,0,0.207970861530807,0.713715955188647,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0.64341568457443,0,0.771048469013278,0,0.0821271560138091,1.03850885836724,0.116210378459959,0,0,0.460404944679482,0,0.546273504020151,0,0,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.309123034943167,0.732555718546747,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.725083469571143,0.255679882248303,0,0.165284915360978,0.576570202095319,0.255225424989168,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.855877976067841,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0.487426979262569,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0.28853842595289,0.213425530045242,0.478278818186467,1.79621434289535,0.191505370132367,0.211673582723883,0.649243880549111,0,0.228234679033192,0.783399478865116,0,0.50787533340481,0.481764225311099,1.81619736471943,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0.222886768554957,0,0.23874448473769,0.296964680832639,0,0,0.281338832821026,0,0.329607748453519,0.422250816255987,0,0.276283915531148,0.503865495708552,0.20453736500431,0.123084805461069,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0.472775363535873,0,0.291604613383254,0.868124974666461,0,0.482385754501632,0,0.995213339381022,0,0,0.10893846351899,0.41827123283581,0,0.113942055847001,0,0.179515288819544,0.54323685961004,0,0,0,0,0.31396051279005,0.831058409500782,0.225595660617181,0.19606253431774,0,0.569261198172555,0,0.632994193584081,0.163232808159148,0.141353071433941,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0.364909578431332,0,0.242780379534093,0,0,0,0.189559738885464,0,0.103688191397247,0,0.330991955875499,0,1.19472429772959,0,1.10939738410511,0.3471194766702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| ||
|short_description=p8@PRPF4B | |short_description=p8@PRPF4B | ||
}} | }} |
Latest revision as of 17:30, 18 September 2015
Short description: | p8@PRPF4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PRPF4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 400bp_to_ENST00000489943_5end |
EntrezGene: | PRPF4B |
HGNC: | 17346 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.72e-09 | 6 |
natural killer cell | 5.47e-09 | 3 |
pro-NK cell | 5.47e-09 | 3 |
naive T cell | 1.88e-08 | 3 |
mature alpha-beta T cell | 6.02e-08 | 18 |
alpha-beta T cell | 6.02e-08 | 18 |
immature T cell | 6.02e-08 | 18 |
mature T cell | 6.02e-08 | 18 |
immature alpha-beta T cell | 6.02e-08 | 18 |
CD4-positive, alpha-beta thymocyte | 6.12e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.12e-07 | 1 |
mature CD4 single-positive thymocyte | 6.12e-07 | 1 |
resting double-positive thymocyte | 6.12e-07 | 1 |
double-positive blast | 6.12e-07 | 1 |
CD69-positive double-positive thymocyte | 6.12e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.12e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.12e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.12e-07 | 1 |