FFCP PHASE1:Hg19::chr12:51984657..51984728,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:51984657..51984728,+
|short_description=p2@SCN8A
|description=CAGE_peak_2_at_SCN8A_5end
|association_with_transcript=0bp_to_ENST00000550891_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6334 | |EntrezGene=6334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10596 | |HGNC=10596 | ||
|TSSclassifier=strong | |||
|UniProt=F8VRN5 | |UniProt=F8VRN5 | ||
|association_with_transcript=0bp_to_ENST00000550891_5end | |||
|cluster_id=chr12:51984657..51984728,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_SCN8A_5end | |||
|id=chr12:51984657..51984728,+ | |||
|ontology_enrichment_celltype=CL:0002620!2.72e-08!23;CL:0000055!1.11e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.91e-09,23 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.01e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.03e-30!57;UBERON:0005068!9.03e-30!57;UBERON:0006241!9.03e-30!57;UBERON:0007135!9.03e-30!57;UBERON:0000073!2.44e-26!94;UBERON:0001016!2.44e-26!94;UBERON:0001017!6.05e-25!82;UBERON:0002616!7.62e-25!59;UBERON:0000955!1.43e-24!69;UBERON:0006238!1.43e-24!69;UBERON:0002780!3.96e-24!41;UBERON:0001890!3.96e-24!41;UBERON:0006240!3.96e-24!41;UBERON:0003075!4.85e-24!86;UBERON:0007284!4.85e-24!86;UBERON:0003080!5.47e-24!42;UBERON:0005743!5.91e-24!86;UBERON:0002346!7.57e-24!90;UBERON:0002020!2.67e-20!34;UBERON:0003528!2.67e-20!34;UBERON:0001869!3.14e-20!32;UBERON:0001893!3.17e-20!34;UBERON:0002791!1.53e-19!33;UBERON:0003056!7.90e-19!61;UBERON:0000475!2.59e-18!365;UBERON:0000956!3.62e-16!25;UBERON:0000203!3.62e-16!25;UBERON:0002619!6.49e-16!22;UBERON:0001950!1.05e-14!20;UBERON:0000033!4.74e-14!123;UBERON:0000153!1.49e-13!129;UBERON:0007811!1.49e-13!129;UBERON:0000924!3.74e-13!173;UBERON:0006601!3.74e-13!173;UBERON:0004121!5.62e-13!169;UBERON:0000025!1.83e-10!194;UBERON:0000483!1.92e-10!309;UBERON:0000481!4.91e-10!347;UBERON:0000119!5.65e-10!312;UBERON:0007023!1.86e-08!115;UBERON:0000477!4.00e-08!286;UBERON:0004111!1.32e-07!241;UBERON:0000064!1.35e-07!219;UBERON:0003076!4.80e-07!15;UBERON:0003057!4.80e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.37e-21;32!UBERON:0003528;5.60e-21;34!UBERON:0002020;5.60e-21;34!UBERON:0001893;8.53e-21;34!UBERON:0002791;9.61e-21;32!UBERON:0002780;1.84e-20;41!UBERON:0001890;1.84e-20;41!UBERON:0000956;5.48e-19;25!UBERON:0000203;5.48e-19;25!UBERON:0000073;7.83e-19;53!UBERON:0002616;7.83e-19;53!UBERON:0002619;1.23e-18;22!UBERON:0001950;3.45e-17;20!UBERON:0000955;2.13e-12;68!UBERON:0001016;1.39e-11;83!UBERON:0001017;1.96e-11;75!UBERON:0002420;9.67e-07;9!UBERON:0007245;9.67e-07;9!UBERON:0010009;9.67e-07;9!UBERON:0010011;9.67e-07;9!UBERON:0000454;9.67e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.80e-34,56;UBERON:0005068,3.80e-34,56;UBERON:0006241,3.80e-34,56;UBERON:0007135,3.80e-34,56;UBERON:0000073,1.38e-32,53;UBERON:0002616,1.38e-32,53;UBERON:0002780,3.48e-28,41;UBERON:0001890,3.48e-28,41;UBERON:0003080,3.48e-28,41;UBERON:0006240,3.48e-28,41;UBERON:0001016,2.43e-27,89;UBERON:0000955,6.70e-26,68;UBERON:0006238,6.70e-26,68;UBERON:0001017,6.00e-25,81;UBERON:0003075,1.82e-24,82;UBERON:0007284,1.82e-24,82;UBERON:0002346,5.26e-24,86;UBERON:0003528,1.16e-23,34;UBERON:0002020,1.16e-23,34;UBERON:0001869,1.40e-23,32;UBERON:0001893,1.41e-23,34;UBERON:0002791,2.52e-22,32;UBERON:0003056,7.77e-21,61;UBERON:0000956,8.72e-19,25;UBERON:0000203,8.72e-19,25;UBERON:0002619,1.74e-18,22;UBERON:0001950,4.63e-17,20;UBERON:0010371,1.51e-16,104;UBERON:0010314,9.14e-16,132;UBERON:0011216,1.34e-12,223;UBERON:0004121,2.39e-11,171;UBERON:0000924,2.39e-11,171;UBERON:0006601,2.39e-11,171;UBERON:0000025,7.11e-10,192;UBERON:0000483,1.07e-08,306;UBERON:0000119,3.18e-08,309;UBERON:0003076,2.41e-07,15;UBERON:0003057,2.41e-07,15;UBERON:0007023,5.90e-07,114 | |||
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| ||
|short_description=p2@SCN8A | |||
}} | }} |
Latest revision as of 20:24, 18 September 2015
Short description: | p2@SCN8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCN8A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000550891_5end |
EntrezGene: | SCN8A |
HGNC: | 10596 |
UniProt: | F8VRN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.91e-09 | 23 |