FFCP PHASE1:Hg19::chr14:21490958..21490975,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57447 | |EntrezGene=57447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14460 | |HGNC=14460 | ||
|TSSclassifier=strong | |||
|UniProt=G3V578 | |UniProt=G3V578 | ||
|association_with_transcript=3bp_to_ENST00000554104,uc001vyt.2_5end | |association_with_transcript=3bp_to_ENST00000554104,uc001vyt.2_5end | ||
|cluster_id=chr14:21490958..21490975,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_30_at_NDRG2_5end | |description=CAGE_peak_30_at_NDRG2_5end | ||
|id=chr14:21490958..21490975,- | |id=chr14:21490958..21490975,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;6.44e-16;1!UBERON:0006298;8.02e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.61e-55!115;UBERON:0001049!1.43e-47!57;UBERON:0005068!1.43e-47!57;UBERON:0006241!1.43e-47!57;UBERON:0007135!1.43e-47!57;UBERON:0002616!1.87e-40!59;UBERON:0002780!6.16e-37!41;UBERON:0001890!6.16e-37!41;UBERON:0006240!6.16e-37!41;UBERON:0003080!7.45e-36!42;UBERON:0000955!2.68e-34!69;UBERON:0006238!2.68e-34!69;UBERON:0001893!1.93e-33!34;UBERON:0001017!2.48e-32!82;UBERON:0002791!3.73e-32!33;UBERON:0002020!2.11e-31!34;UBERON:0003528!2.11e-31!34;UBERON:0003075!3.63e-31!86;UBERON:0007284!3.63e-31!86;UBERON:0002346!7.32e-31!90;UBERON:0005743!2.82e-30!86;UBERON:0001869!3.07e-30!32;UBERON:0000073!2.78e-26!94;UBERON:0001016!2.78e-26!94;UBERON:0000153!9.50e-25!129;UBERON:0007811!9.50e-25!129;UBERON:0000033!6.55e-24!123;UBERON:0002619!4.06e-22!22;UBERON:0003056!5.35e-22!61;UBERON:0000956!5.45e-19!25;UBERON:0000203!5.45e-19!25;UBERON:0000924!1.19e-18!173;UBERON:0006601!1.19e-18!173;UBERON:0001950!1.39e-18!20;UBERON:0004121!1.89e-18!169;UBERON:0004111!1.91e-16!241;UBERON:0009663!7.52e-15!7;UBERON:0002308!8.25e-15!9;UBERON:0000125!8.25e-15!9;UBERON:0000025!1.44e-14!194;UBERON:0000477!2.74e-13!286;UBERON:0003076!1.74e-12!15;UBERON:0003057!1.74e-12!15;UBERON:0000200!1.33e-11!6;UBERON:0002420!3.02e-11!9;UBERON:0007245!3.02e-11!9;UBERON:0010009!3.02e-11!9;UBERON:0010011!3.02e-11!9;UBERON:0000454!3.02e-11!9;UBERON:0004733!2.37e-10!12;UBERON:0002028!2.37e-10!12;UBERON:0007277!2.37e-10!12;UBERON:0001872!3.88e-10!5;UBERON:0004732!2.00e-09!13;UBERON:0000369!3.93e-09!4;UBERON:0002435!3.93e-09!4;UBERON:0000204!3.93e-09!4;UBERON:0010082!3.93e-09!4;UBERON:0002298!4.06e-09!8;UBERON:0001044!5.29e-09!6;UBERON:0003293!5.29e-09!6;UBERON:0003294!5.29e-09!6;UBERON:0010047!5.29e-09!6;UBERON:0000167!5.29e-09!6;UBERON:0000481!1.99e-08!347;UBERON:0000475!2.27e-08!365;UBERON:0000483!1.90e-07!309;UBERON:0000062!2.10e-07!511;UBERON:0005383!2.13e-07!3;UBERON:0005382!2.13e-07!3;UBERON:0000119!3.01e-07!312;UBERON:0001896!4.78e-07!3;UBERON:0005290!4.78e-07!3;UBERON:0010096!4.78e-07!3;UBERON:0006947!5.29e-07!3;UBERON:0004054!5.29e-07!3;UBERON:0002771!6.61e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;6.46e-30;2!UBERON:0001044;2.04e-22;6!UBERON:0003293;2.04e-22;6!UBERON:0003294;2.04e-22;6!UBERON:0010047;2.04e-22;6!UBERON:0003408;2.04e-22;6!UBERON:0000167;2.04e-22;6!UBERON:0001831;6.44e-16;1!UBERON:0001567;6.44e-16;1!UBERON:0002365;6.72e-16;31!UBERON:0002330;6.72e-16;31!UBERON:0001736;8.02e-16;1!UBERON:0004733;3.60e-11;12!UBERON:0002028;3.60e-11;12!UBERON:0004732;2.35e-10;13!UBERON:0002298;2.40e-10;6!UBERON:0001041;5.78e-10;14!UBERON:0003528;7.68e-09;34!UBERON:0002020;7.68e-09;34!UBERON:0004089;1.29e-08;2!UBERON:0001954;1.61e-08;2!UBERON:0003022;1.61e-08;2!UBERON:0002421;1.61e-08;2!UBERON:0002600;1.61e-08;2!UBERON:0003127;2.31e-08;2!UBERON:0002771;2.31e-08;2!UBERON:0002148;2.31e-08;2!UBERON:0001875;2.31e-08;2!UBERON:0006331;2.31e-08;2!UBERON:0009662;2.31e-08;2!UBERON:0006514;2.31e-08;2!UBERON:0000161;1.76e-07;19!UBERON:0000166;1.76e-07;19!UBERON:0002107;2.95e-07;19!UBERON:0006925;2.95e-07;19!UBERON:0002680;3.44e-07;9!UBERON:0000125;3.44e-07;9!UBERON:0002308;3.44e-07;9!UBERON:0001895;3.44e-07;9!UBERON:0002791;5.84e-07;32!UBERON:0001869;5.84e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.96e-30,2;UBERON:0001044,2.12e-22,6;UBERON:0003293,2.12e-22,6;UBERON:0003294,2.12e-22,6;UBERON:0010047,2.12e-22,6;UBERON:0000167,2.12e-22,6;UBERON:0002365,2.81e-16,31;UBERON:0002330,2.81e-16,31;UBERON:0001831,6.44e-16,1;UBERON:0001567,6.44e-16,1;UBERON:0008801,6.44e-16,1;UBERON:0001736,8.63e-16,1;UBERON:0006298,8.63e-16,1;UBERON:0003408,1.05e-13,10;UBERON:0000073,2.16e-12,53;UBERON:0002616,2.16e-12,53;UBERON:0001049,1.03e-11,56;UBERON:0005068,1.03e-11,56;UBERON:0006241,1.03e-11,56;UBERON:0007135,1.03e-11,56;UBERON:0007023,1.67e-11,114;UBERON:0004733,3.86e-11,12;UBERON:0002028,3.86e-11,12;UBERON:0007277,3.86e-11,12;UBERON:0011216,6.13e-11,223;UBERON:0004732,2.50e-10,13;UBERON:0002298,3.04e-10,6;UBERON:0003528,3.39e-10,34;UBERON:0002020,3.39e-10,34;UBERON:0000955,1.92e-09,68;UBERON:0006238,1.92e-09,68;UBERON:0003076,5.01e-09,15;UBERON:0003057,5.01e-09,15;UBERON:0004111,1.23e-08,240;UBERON:0004089,1.29e-08,2;UBERON:0001954,1.61e-08,2;UBERON:0003022,1.61e-08,2;UBERON:0002421,1.61e-08,2;UBERON:0002600,1.61e-08,2;UBERON:0001875,1.73e-08,2;UBERON:0006514,1.73e-08,2;UBERON:0002771,2.00e-08,2;UBERON:0002530,2.00e-08,59;UBERON:0003127,2.15e-08,2;UBERON:0002148,2.48e-08,2;UBERON:0006331,2.48e-08,2;UBERON:0009662,2.48e-08,2;UBERON:0001017,7.05e-08,81;UBERON:0003075,7.05e-08,82;UBERON:0007284,7.05e-08,82;UBERON:0001041,1.67e-07,87;UBERON:0002346,1.72e-07,86;UBERON:0000125,3.14e-07,9;UBERON:0002308,3.14e-07,9;UBERON:0002791,3.18e-07,32;UBERON:0001869,3.18e-07,32;UBERON:0002680,3.24e-07,9;UBERON:0001895,3.24e-07,9;UBERON:0010092,3.24e-07,9;UBERON:0002107,3.29e-07,19;UBERON:0006925,3.29e-07,19;UBERON:0008836,3.29e-07,19;UBERON:0004121,3.77e-07,171;UBERON:0000924,3.77e-07,171;UBERON:0006601,3.77e-07,171;UBERON:0001016,4.73e-07,89;UBERON:0001893,8.02e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.723578631752448,1.52581736317083,0.442317039724898,0.886642856860642,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.410716136675979,0,0,0,0.837847203816763,0.687481272035051,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,2.38568906942791,0.681017030557878,0,0.137539436597234,0,0.449947783103001,0,0.303747783290123,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,1.29282956361551,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.34228891392159,0.250381861413,1.14681839138014,0.554645257684261,0.248385611765534,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.385375350578757,5.6678630530234,0,0.205116364240755,0,0.345786262321089,0.645902582527404,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.507326481551255,0.546974809018219,18.6407640731442,0,0,0.127762427639595,0,0,0.606965604236632,0.455324382702595,0,0,0.171488009437418,0.203909198930495,0.197318320688547,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,24.9531868115761,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.785233868459781,0.297046400327086,0,0,0,0,0,0,0,0,0.730336388246517,5.04602211744995,0.716697915757256,0,0.339957450954573,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0.267964130156178,0.829169439458779,0.724030971033267,0.639701945702943,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0.0673520530145875,0.286888821570705,1.33064142618405,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.723578631752448,1.52581736317083,0.442317039724898,0.886642856860642,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.410716136675979,0,0,0,0.837847203816763,0.687481272035051,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,2.38568906942791,0.681017030557878,0,0.137539436597234,0,0.449947783103001,0,0.303747783290123,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,1.29282956361551,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.34228891392159,0.250381861413,1.14681839138014,0.554645257684261,0.248385611765534,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.385375350578757,5.6678630530234,0,0.205116364240755,0,0.345786262321089,0.645902582527404,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.507326481551255,0.546974809018219,18.6407640731442,0,0,0.127762427639595,0,0,0.606965604236632,0.455324382702595,0,0,0.171488009437418,0.203909198930495,0.197318320688547,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,24.9531868115761,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.785233868459781,0.297046400327086,0,0,0,0,0,0,0,0,0.730336388246517,5.04602211744995,0.716697915757256,0,0.339957450954573,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0.267964130156178,0.829169439458779,0.724030971033267,0.639701945702943,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0.0673520530145875,0.286888821570705,1.33064142618405,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p30@NDRG2 | |short_description=p30@NDRG2 | ||
}} | }} |
Latest revision as of 01:18, 19 September 2015
Short description: | p30@NDRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_NDRG2_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 3bp_to_ENST00000554104, uc001vyt.2_5end |
EntrezGene: | NDRG2 |
HGNC: | 14460 |
UniProt: | G3V578 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data