FFCP PHASE1:Hg19::chr12:53601025..53601043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3695 | |EntrezGene=3695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6162 | |HGNC=6162 | ||
|TSSclassifier=strong | |||
|UniProt=F8W186 | |UniProt=F8W186 | ||
|association_with_transcript=0bp_to_ENST00000549086,ENST00000549462_5end | |association_with_transcript=0bp_to_ENST00000549086,ENST00000549462_5end | ||
|cluster_id=chr12:53601025..53601043,- | |||
|coexpression_cluster_id=C3295 | |coexpression_cluster_id=C3295 | ||
|description=CAGE_peak_1_at_ITGB7_5end | |description=CAGE_peak_1_at_ITGB7_5end | ||
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|ontology_enrichment_celltype=CL:0000037!2.03e-72!172;CL:0000566!2.03e-72!172;CL:0002032!3.76e-69!165;CL:0000837!3.76e-69!165;CL:0000988!2.91e-65!182;CL:0000738!4.32e-63!140;CL:0002031!2.86e-54!124;CL:0002087!2.80e-53!119;CL:0000763!1.87e-34!112;CL:0000049!1.87e-34!112;CL:0000542!5.01e-32!53;CL:0000051!5.01e-32!53;CL:0000838!1.74e-31!52;CL:0000766!1.77e-24!76;CL:0000557!2.62e-22!71;CL:0000839!5.57e-21!70;CL:0002009!1.49e-20!65;CL:0002194!3.54e-19!63;CL:0000576!3.54e-19!63;CL:0000040!3.54e-19!63;CL:0000559!3.54e-19!63;CL:0002057!5.20e-19!42;CL:0000860!3.22e-17!45;CL:0000945!4.75e-16!24;CL:0000826!4.75e-16!24;CL:0000791!1.94e-14!18;CL:0000789!1.94e-14!18;CL:0002420!1.94e-14!18;CL:0002419!1.94e-14!18;CL:0000790!1.94e-14!18;CL:0000084!2.69e-14!25;CL:0000827!2.69e-14!25;CL:0000134!2.22e-10!358;CL:0000625!9.33e-10!11;CL:0000236!2.25e-09!14;CL:0002320!2.64e-09!365 | |ontology_enrichment_celltype=CL:0000037!2.03e-72!172;CL:0000566!2.03e-72!172;CL:0002032!3.76e-69!165;CL:0000837!3.76e-69!165;CL:0000988!2.91e-65!182;CL:0000738!4.32e-63!140;CL:0002031!2.86e-54!124;CL:0002087!2.80e-53!119;CL:0000763!1.87e-34!112;CL:0000049!1.87e-34!112;CL:0000542!5.01e-32!53;CL:0000051!5.01e-32!53;CL:0000838!1.74e-31!52;CL:0000766!1.77e-24!76;CL:0000557!2.62e-22!71;CL:0000839!5.57e-21!70;CL:0002009!1.49e-20!65;CL:0002194!3.54e-19!63;CL:0000576!3.54e-19!63;CL:0000040!3.54e-19!63;CL:0000559!3.54e-19!63;CL:0002057!5.20e-19!42;CL:0000860!3.22e-17!45;CL:0000945!4.75e-16!24;CL:0000826!4.75e-16!24;CL:0000791!1.94e-14!18;CL:0000789!1.94e-14!18;CL:0002420!1.94e-14!18;CL:0002419!1.94e-14!18;CL:0000790!1.94e-14!18;CL:0000084!2.69e-14!25;CL:0000827!2.69e-14!25;CL:0000134!2.22e-10!358;CL:0000625!9.33e-10!11;CL:0000236!2.25e-09!14;CL:0002320!2.64e-09!365 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.60e-21;53!CL:0000860;8.73e-20;33!CL:0002057;8.73e-20;33!CL:0002087;1.29e-19;104!CL:0000791;7.34e-19;18!CL:0000789;7.34e-19;18!CL:0002419;7.34e-19;18!CL:0000945;1.12e-18;24!CL:0000084;5.56e-18;25!CL:0000473;4.99e-17;39!CL:0000234;4.99e-17;39!CL:0000576;1.35e-16;48!CL:0000738;2.15e-15;136!CL:0000988;9.91e-13;177!CL:0000625;1.43e-12;11!CL:0000763;1.65e-12;100!CL:0000766;2.37e-12;69!CL:0000236;4.57e-09;13!CL:0000624;4.34e-07;6!CL:0000094;6.00e-07;8 | |ontology_enrichment_celltype_v019=CL:0000542;1.60e-21;53!CL:0000860;8.73e-20;33!CL:0002057;8.73e-20;33!CL:0002087;1.29e-19;104!CL:0000791;7.34e-19;18!CL:0000789;7.34e-19;18!CL:0002419;7.34e-19;18!CL:0000945;1.12e-18;24!CL:0000084;5.56e-18;25!CL:0000473;4.99e-17;39!CL:0000234;4.99e-17;39!CL:0000576;1.35e-16;48!CL:0000738;2.15e-15;136!CL:0000988;9.91e-13;177!CL:0000625;1.43e-12;11!CL:0000763;1.65e-12;100!CL:0000766;2.37e-12;69!CL:0000236;4.57e-09;13!CL:0000624;4.34e-07;6!CL:0000094;6.00e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.01e-85,168;CL:0002032,3.52e-81,161;CL:0000837,3.52e-81,161;CL:0000988,6.82e-79,177;CL:0000738,4.71e-77,136;CL:0002087,3.99e-67,115;CL:0002031,3.83e-65,120;CL:0000542,1.60e-39,53;CL:0000051,1.60e-39,53;CL:0000838,8.53e-39,52;CL:0000763,1.06e-38,108;CL:0000049,1.06e-38,108;CL:0000766,1.85e-28,72;CL:0002009,6.47e-26,61;CL:0000557,1.33e-25,67;CL:0002194,4.60e-24,59;CL:0000576,4.60e-24,59;CL:0000040,4.60e-24,59;CL:0000559,4.60e-24,59;CL:0000839,6.89e-24,66;CL:0000473,5.41e-23,48;CL:0000234,5.41e-23,48;CL:0000860,1.75e-22,42;CL:0002057,1.75e-22,42;CL:0000791,7.05e-19,18;CL:0000789,7.05e-19,18;CL:0002420,7.05e-19,18;CL:0002419,7.05e-19,18;CL:0000790,7.05e-19,18;CL:0000945,1.12e-18,24;CL:0000826,1.12e-18,24;CL:0000134,1.84e-18,354;CL:0000084,4.85e-18,25;CL:0000827,4.85e-18,25;CL:0002320,2.55e-17,361;CL:0000219,2.12e-13,386;CL:0000625,1.40e-12,11;CL:0000236,7.56e-10,14;CL:0000048,3.34e-09,427;CL:0000034,6.58e-09,441;CL:0000723,1.32e-08,433;CL:0000624,4.25e-07,6;CL:0000094,5.82e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;1.60e-21;53!CL:0000790;7.34e-19;18!CL:0002057;1.38e-16;42!CL:0000049;8.01e-11;108 | |ontology_enrichment_development_v019=CL:0000051;1.60e-21;53!CL:0000790;7.34e-19;18!CL:0002057;1.38e-16;42!CL:0000049;8.01e-11;108 | ||
|ontology_enrichment_disease=DOID:2531!2.35e-12!51;DOID:0060083!2.35e-12!51;DOID:1240!4.32e-09!39;DOID:8692!6.62e-08!31 | |ontology_enrichment_disease=DOID:2531!2.35e-12!51;DOID:0060083!2.35e-12!51;DOID:1240!4.32e-09!39;DOID:8692!6.62e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.91e-07;31!DOID:1240;4.40e-07;39!DOID:2531;9.14e-07;51!DOID:0060083;9.14e-07;51 | |ontology_enrichment_disease_v019=DOID:8692;2.91e-07;31!DOID:1240;4.40e-07;39!DOID:2531;9.14e-07;51!DOID:0060083;9.14e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.26e-11,51;DOID:0060083,1.26e-11,51;DOID:1240,4.18e-09,39;DOID:8692,1.03e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.84e-30!102;UBERON:0003061!4.84e-30!102;UBERON:0002193!4.16e-27!112;UBERON:0002371!2.69e-20!80;UBERON:0001474!4.15e-17!86;UBERON:0002405!1.38e-14!115;UBERON:0007023!1.45e-12!115;UBERON:0004765!1.58e-12!101;UBERON:0001434!1.58e-12!101;UBERON:0002384!1.16e-08!375;UBERON:0000178!3.45e-07!15;UBERON:0000179!3.45e-07!15;UBERON:0000463!3.45e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!4.84e-30!102;UBERON:0003061!4.84e-30!102;UBERON:0002193!4.16e-27!112;UBERON:0002371!2.69e-20!80;UBERON:0001474!4.15e-17!86;UBERON:0002405!1.38e-14!115;UBERON:0007023!1.45e-12!115;UBERON:0004765!1.58e-12!101;UBERON:0001434!1.58e-12!101;UBERON:0002384!1.16e-08!375;UBERON:0000178!3.45e-07!15;UBERON:0000179!3.45e-07!15;UBERON:0000463!3.45e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.34e-09;15!UBERON:0000179;6.34e-09;15!UBERON:0000463;6.34e-09;15!UBERON:0002390;1.10e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.34e-09;15!UBERON:0000179;6.34e-09;15!UBERON:0000463;6.34e-09;15!UBERON:0002390;1.10e-07;32 | ||
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| ||
|short_description=p1@ITGB7 | |short_description=p1@ITGB7 | ||
}} | }} |
Latest revision as of 02:07, 19 September 2015
Short description: | p1@ITGB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITGB7_5end |
Coexpression cluster: | C3295_myeloma_lymphangiectasia_CD4_adult_mycosis_CD8_hereditary |
Association with transcript: | 0bp_to_ENST00000549086, ENST00000549462_5end |
EntrezGene: | ITGB7 |
HGNC: | 6162 |
UniProt: | F8W186 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.19e-35 | 98 |
blood island | 2.19e-35 | 98 |
hemolymphoid system | 3.55e-32 | 108 |
immune system | 1.67e-24 | 93 |
bone marrow | 7.86e-23 | 76 |
bone element | 7.74e-20 | 82 |
skeletal element | 1.60e-16 | 90 |
connective tissue | 3.40e-16 | 371 |
skeletal system | 3.27e-13 | 100 |
blood | 6.37e-09 | 15 |
haemolymphatic fluid | 6.37e-09 | 15 |
organism substance | 6.37e-09 | 15 |
lateral plate mesoderm | 1.18e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.26e-11 | 51 |
immune system cancer | 1.26e-11 | 51 |
leukemia | 4.18e-09 | 39 |
myeloid leukemia | 1.03e-07 | 31 |