FFCP PHASE1:Hg19::chr4:86699902..86699958,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83478 | |EntrezGene=83478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |HGNC=25361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_ENST00000395183_5end | |association_with_transcript=43bp_to_ENST00000395183_5end | ||
|cluster_id=chr4:86699902..86699958,+ | |||
|coexpression_cluster_id=C4257 | |||
|description=CAGE_peak_4_at_ARHGAP24_5end | |description=CAGE_peak_4_at_ARHGAP24_5end | ||
|id=chr4:86699902..86699958,+ | |id=chr4:86699902..86699958,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.03e-33!180;CL:0000222!8.72e-30!119;CL:0000680!1.09e-22!57;CL:0000056!1.09e-22!57;CL:0000355!1.09e-22!57;CL:0000187!3.21e-21!54;CL:0000057!3.50e-20!75;CL:0000183!5.65e-20!59;CL:0000393!4.18e-18!60;CL:0000211!4.18e-18!60;CL:0002139!6.19e-18!24;CL:0000192!9.13e-17!42;CL:0000514!9.13e-17!42;CL:0000359!1.39e-16!32;CL:0000071!1.88e-14!18;CL:0002546!1.88e-14!18;CL:0000115!2.81e-11!35;CL:0002620!4.75e-11!23;CL:0002078!6.28e-10!44;CL:0000220!1.25e-08!246;CL:1000413!1.75e-08!9;CL:0002494!2.28e-08!16;CL:0002321!2.91e-08!248;CL:0000213!3.12e-08!57;CL:0000215!3.12e-08!57;CL:0000048!4.38e-08!430;CL:0000723!3.10e-07!436;CL:0002539!3.78e-07!10 | |ontology_enrichment_celltype=CL:0000055!4.03e-33!180;CL:0000222!8.72e-30!119;CL:0000680!1.09e-22!57;CL:0000056!1.09e-22!57;CL:0000355!1.09e-22!57;CL:0000187!3.21e-21!54;CL:0000057!3.50e-20!75;CL:0000183!5.65e-20!59;CL:0000393!4.18e-18!60;CL:0000211!4.18e-18!60;CL:0002139!6.19e-18!24;CL:0000192!9.13e-17!42;CL:0000514!9.13e-17!42;CL:0000359!1.39e-16!32;CL:0000071!1.88e-14!18;CL:0002546!1.88e-14!18;CL:0000115!2.81e-11!35;CL:0002620!4.75e-11!23;CL:0002078!6.28e-10!44;CL:0000220!1.25e-08!246;CL:1000413!1.75e-08!9;CL:0002494!2.28e-08!16;CL:0002321!2.91e-08!248;CL:0000213!3.12e-08!57;CL:0000215!3.12e-08!57;CL:0000048!4.38e-08!430;CL:0000723!3.10e-07!436;CL:0002539!3.78e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.16e-23;24!CL:0000071;3.34e-18;18!CL:0000359;5.58e-18;32!CL:0000115;2.25e-14;36!CL:0002620;7.40e-14;23!CL:0000192;1.06e-12;43!CL:0000187;2.18e-12;55!CL:1000413;1.71e-10;9!CL:0000393;8.27e-10;61!CL:0000211;8.27e-10;61!CL:0002078;1.21e-09;45!CL:0002494;2.03e-09;16!CL:0002539;1.13e-08;10!CL:0000057;4.98e-08;73!CL:0002334;6.96e-08;12!CL:0000134;9.13e-08;55!CL:0002544;1.57e-07;6!CL:0000213;2.14e-07;58!CL:0000215;2.14e-07;58!CL:0002543;2.85e-07;6!CL:0000723;3.23e-07;61!CL:0000048;6.02e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.62e-33,121;CL:0000680,1.79e-23,58;CL:0000056,1.79e-23,58;CL:0000355,1.79e-23,58;CL:0002139,1.14e-22,24;CL:0000187,1.18e-21,55;CL:0000057,1.52e-20,76;CL:0000359,4.51e-19,32;CL:0000071,3.54e-18,18;CL:0002546,3.54e-18,18;CL:0000393,7.73e-18,61;CL:0000211,7.73e-18,61;CL:0000192,9.25e-17,43;CL:0000514,9.25e-17,43;CL:0000115,1.22e-16,36;CL:0000048,6.54e-15,427;CL:0000723,5.04e-14,433;CL:0002620,8.66e-14,23;CL:0002078,1.80e-13,45;CL:0000034,6.77e-13,441;CL:0000213,3.73e-11,58;CL:0000215,3.73e-11,58;CL:1000413,1.75e-10,9;CL:0002494,1.82e-09,16;CL:0002539,9.08e-09,10;CL:0002321,7.02e-08,250;CL:0002334,7.27e-08,12;CL:0002544,1.60e-07,6;CL:0002543,2.86e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.34e-18;18!CL:0000355;9.38e-13;58!CL:0000514;1.06e-12;43!CL:0000222;4.93e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.16e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.20e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!6.85e-36!69;UBERON:0004872!7.83e-36!84;UBERON:0002049!1.01e-33!79;UBERON:0007798!1.01e-33!79;UBERON:0001981!6.57e-33!60;UBERON:0007500!6.57e-33!60;UBERON:0004537!6.57e-33!60;UBERON:0006965!6.57e-33!60;UBERON:0004535!3.29e-28!110;UBERON:0000914!3.47e-28!83;UBERON:0002329!3.47e-28!83;UBERON:0003077!3.47e-28!83;UBERON:0003059!3.47e-28!83;UBERON:0007282!3.47e-28!83;UBERON:0009618!3.47e-28!83;UBERON:0007285!3.47e-28!83;UBERON:0001009!1.73e-27!113;UBERON:0001637!1.07e-26!42;UBERON:0003509!1.07e-26!42;UBERON:0004572!1.07e-26!42;UBERON:0004290!1.65e-26!70;UBERON:0003914!6.28e-24!118;UBERON:0000486!5.41e-23!82;UBERON:0002385!5.50e-23!63;UBERON:0001015!5.50e-23!63;UBERON:0000383!5.50e-23!63;UBERON:0001134!1.85e-22!61;UBERON:0002036!1.85e-22!61;UBERON:0003082!1.85e-22!61;UBERON:0000490!3.70e-22!138;UBERON:0004573!5.46e-21!33;UBERON:0004571!5.46e-21!33;UBERON:0005256!3.93e-19!143;UBERON:0001986!1.88e-14!18;UBERON:0004638!1.88e-14!18;UBERON:0004852!1.88e-14!18;UBERON:0000947!2.62e-14!21;UBERON:0010191!2.62e-14!21;UBERON:0002100!5.34e-14!216;UBERON:0000487!2.50e-12!22;UBERON:0006914!1.18e-11!25;UBERON:0000119!3.13e-11!312;UBERON:0000483!5.55e-11!309;UBERON:0000926!6.53e-11!448;UBERON:0004120!6.53e-11!448;UBERON:0006603!6.53e-11!448;UBERON:0000477!2.48e-10!286;UBERON:0004111!5.25e-10!241;UBERON:0000468!1.45e-09!659;UBERON:0000475!1.55e-09!365;UBERON:0000948!2.88e-09!24;UBERON:0005498!2.88e-09!24;UBERON:0004140!2.88e-09!24;UBERON:0009881!2.88e-09!24;UBERON:0004141!2.88e-09!24;UBERON:0003084!2.88e-09!24;UBERON:0007005!2.88e-09!24;UBERON:0004139!2.88e-09!24;UBERON:0004291!2.88e-09!24;UBERON:0002199!3.07e-09!45;UBERON:0002416!3.07e-09!45;UBERON:0003104!5.52e-09!238;UBERON:0009142!5.52e-09!238;UBERON:0003915!1.75e-08!9;UBERON:0004700!1.75e-08!9;UBERON:0001917!1.75e-08!9;UBERON:0007100!2.52e-08!27;UBERON:0000467!2.77e-08!625;UBERON:0000480!3.88e-08!626;UBERON:0001135!5.85e-08!15;UBERON:0000025!6.23e-08!194;UBERON:0002097!1.06e-07!40;UBERON:0003102!3.20e-07!95;UBERON:0004237!3.78e-07!10;UBERON:0004695!3.78e-07!10;UBERON:0002111!3.78e-07!10;UBERON:0004178!3.78e-07!10 | |ontology_enrichment_uberon=UBERON:0000055!6.85e-36!69;UBERON:0004872!7.83e-36!84;UBERON:0002049!1.01e-33!79;UBERON:0007798!1.01e-33!79;UBERON:0001981!6.57e-33!60;UBERON:0007500!6.57e-33!60;UBERON:0004537!6.57e-33!60;UBERON:0006965!6.57e-33!60;UBERON:0004535!3.29e-28!110;UBERON:0000914!3.47e-28!83;UBERON:0002329!3.47e-28!83;UBERON:0003077!3.47e-28!83;UBERON:0003059!3.47e-28!83;UBERON:0007282!3.47e-28!83;UBERON:0009618!3.47e-28!83;UBERON:0007285!3.47e-28!83;UBERON:0001009!1.73e-27!113;UBERON:0001637!1.07e-26!42;UBERON:0003509!1.07e-26!42;UBERON:0004572!1.07e-26!42;UBERON:0004290!1.65e-26!70;UBERON:0003914!6.28e-24!118;UBERON:0000486!5.41e-23!82;UBERON:0002385!5.50e-23!63;UBERON:0001015!5.50e-23!63;UBERON:0000383!5.50e-23!63;UBERON:0001134!1.85e-22!61;UBERON:0002036!1.85e-22!61;UBERON:0003082!1.85e-22!61;UBERON:0000490!3.70e-22!138;UBERON:0004573!5.46e-21!33;UBERON:0004571!5.46e-21!33;UBERON:0005256!3.93e-19!143;UBERON:0001986!1.88e-14!18;UBERON:0004638!1.88e-14!18;UBERON:0004852!1.88e-14!18;UBERON:0000947!2.62e-14!21;UBERON:0010191!2.62e-14!21;UBERON:0002100!5.34e-14!216;UBERON:0000487!2.50e-12!22;UBERON:0006914!1.18e-11!25;UBERON:0000119!3.13e-11!312;UBERON:0000483!5.55e-11!309;UBERON:0000926!6.53e-11!448;UBERON:0004120!6.53e-11!448;UBERON:0006603!6.53e-11!448;UBERON:0000477!2.48e-10!286;UBERON:0004111!5.25e-10!241;UBERON:0000468!1.45e-09!659;UBERON:0000475!1.55e-09!365;UBERON:0000948!2.88e-09!24;UBERON:0005498!2.88e-09!24;UBERON:0004140!2.88e-09!24;UBERON:0009881!2.88e-09!24;UBERON:0004141!2.88e-09!24;UBERON:0003084!2.88e-09!24;UBERON:0007005!2.88e-09!24;UBERON:0004139!2.88e-09!24;UBERON:0004291!2.88e-09!24;UBERON:0002199!3.07e-09!45;UBERON:0002416!3.07e-09!45;UBERON:0003104!5.52e-09!238;UBERON:0009142!5.52e-09!238;UBERON:0003915!1.75e-08!9;UBERON:0004700!1.75e-08!9;UBERON:0001917!1.75e-08!9;UBERON:0007100!2.52e-08!27;UBERON:0000467!2.77e-08!625;UBERON:0000480!3.88e-08!626;UBERON:0001135!5.85e-08!15;UBERON:0000025!6.23e-08!194;UBERON:0002097!1.06e-07!40;UBERON:0003102!3.20e-07!95;UBERON:0004237!3.78e-07!10;UBERON:0004695!3.78e-07!10;UBERON:0002111!3.78e-07!10;UBERON:0004178!3.78e-07!10 | ||
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| ||
|short_description=p4@ARHGAP24 | |short_description=p4@ARHGAP24 | ||
}} | }} |
Latest revision as of 03:35, 19 September 2015
Short description: | p4@ARHGAP24 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGAP24_5end |
Coexpression cluster: | C4257_Endothelial_basal_Smooth_bone_Renal_mesenchymal_Fibroblast |
Association with transcript: | 43bp_to_ENST00000395183_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.62e-33 | 121 |
muscle precursor cell | 1.79e-23 | 58 |
myoblast | 1.79e-23 | 58 |
multi-potent skeletal muscle stem cell | 1.79e-23 | 58 |
endothelial cell of vascular tree | 1.14e-22 | 24 |
muscle cell | 1.18e-21 | 55 |
fibroblast | 1.52e-20 | 76 |
vascular associated smooth muscle cell | 4.51e-19 | 32 |
blood vessel endothelial cell | 3.54e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.54e-18 | 18 |
electrically responsive cell | 7.73e-18 | 61 |
electrically active cell | 7.73e-18 | 61 |
smooth muscle cell | 9.25e-17 | 43 |
smooth muscle myoblast | 9.25e-17 | 43 |
endothelial cell | 1.22e-16 | 36 |
multi fate stem cell | 6.54e-15 | 427 |
somatic stem cell | 5.04e-14 | 433 |
skin fibroblast | 8.66e-14 | 23 |
meso-epithelial cell | 1.80e-13 | 45 |
stem cell | 6.77e-13 | 441 |
lining cell | 3.73e-11 | 58 |
barrier cell | 3.73e-11 | 58 |
endothelial cell of artery | 1.75e-10 | 9 |
cardiocyte | 1.82e-09 | 16 |
aortic smooth muscle cell | 9.08e-09 | 10 |
embryonic cell | 7.02e-08 | 250 |
preadipocyte | 7.27e-08 | 12 |
aortic endothelial cell | 1.60e-07 | 6 |
vein endothelial cell | 2.86e-07 | 6 |
Ontology term | p-value | n |
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