FFCP PHASE1:Hg19::chr1:76540475..76540526,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:76540475..76540526,+ to FFCP PHASE1:Hg19::chr1:76540475..76540526,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=256435 | |EntrezGene=256435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19343 | |HGNC=19343 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDV1 | |UniProt=Q8NDV1 | ||
|association_with_transcript=71bp_to_ENST00000328299_5end | |||
|cluster_id=chr1:76540475..76540526,+ | |||
|description=CAGE_peak_2_at_ST6GALNAC3_5end | |||
|id=chr1:76540475..76540526,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.40e-14!24;CL:0000115!2.56e-11!35;CL:0000071!6.75e-11!18;CL:0002546!6.75e-11!18;CL:0002078!2.61e-08!44;CL:0000213!9.64e-08!57;CL:0000215!9.64e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.47e-18;24!CL:0000071;5.97e-14;18!CL:0000115;8.03e-12;36!CL:0002078;1.14e-07;45!CL:1000413;1.64e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.76e-18,24;CL:0000115,7.04e-15,36;CL:0000071,2.90e-14,18;CL:0002546,2.90e-14,18;CL:0002078,6.03e-11,45;CL:0000213,1.73e-09,58;CL:0000215,1.73e-09,58;CL:1000413,1.15e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;5.97e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.53e-35!115;UBERON:0003075!1.78e-18!86;UBERON:0007284!1.78e-18!86;UBERON:0005743!4.57e-17!86;UBERON:0001049!5.81e-17!57;UBERON:0005068!5.81e-17!57;UBERON:0006241!5.81e-17!57;UBERON:0007135!5.81e-17!57;UBERON:0002346!3.29e-16!90;UBERON:0001017!6.04e-16!82;UBERON:0000073!2.44e-15!94;UBERON:0001016!2.44e-15!94;UBERON:0003056!1.78e-14!61;UBERON:0003080!5.47e-14!42;UBERON:0002616!2.20e-13!59;UBERON:0002780!2.34e-13!41;UBERON:0001890!2.34e-13!41;UBERON:0006240!2.34e-13!41;UBERON:0000955!2.91e-12!69;UBERON:0006238!2.91e-12!69;UBERON:0001893!3.71e-11!34;UBERON:0002020!5.27e-11!34;UBERON:0003528!5.27e-11!34;UBERON:0001986!6.75e-11!18;UBERON:0004638!6.75e-11!18;UBERON:0004852!6.75e-11!18;UBERON:0002791!9.93e-11!33;UBERON:0000025!1.01e-10!194;UBERON:0001869!5.50e-10!32;UBERON:0004111!1.72e-09!241;UBERON:0000487!7.04e-09!22;UBERON:0000153!1.18e-08!129;UBERON:0007811!1.18e-08!129;UBERON:0006914!1.53e-08!25;UBERON:0000033!1.53e-08!123;UBERON:0004121!2.47e-08!169;UBERON:0000477!2.77e-08!286;UBERON:0000922!5.11e-08!612;UBERON:0000468!8.86e-08!659;UBERON:0002619!1.38e-07!22;UBERON:0000467!1.76e-07!625;UBERON:0000956!1.79e-07!25;UBERON:0000203!1.79e-07!25;UBERON:0000924!1.99e-07!173;UBERON:0006601!1.99e-07!173;UBERON:0000480!2.52e-07!626;UBERON:0001009!4.79e-07!113;UBERON:0001950!8.77e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.97e-14;18!UBERON:0001986;5.97e-14;18!UBERON:0004852;5.97e-14;18!UBERON:0007023;1.63e-10;114!UBERON:0000487;3.53e-10;22!UBERON:0006914;1.42e-09;25!UBERON:0002780;1.46e-09;41!UBERON:0001890;1.46e-09;41!UBERON:0001893;7.47e-09;34!UBERON:0000073;1.01e-08;53!UBERON:0002616;1.01e-08;53!UBERON:0003528;1.33e-08;34!UBERON:0002020;1.33e-08;34!UBERON:0002791;1.96e-08;32!UBERON:0001869;4.23e-08;32!UBERON:0003915;1.64e-07;9!UBERON:0004700;1.64e-07;9!UBERON:0001917;1.64e-07;9!UBERON:0001638;3.01e-07;9!UBERON:0003920;3.01e-07;9!UBERON:0004582;3.01e-07;9!UBERON:0000490;5.42e-07;33!UBERON:0002619;9.73e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.04e-39,114;UBERON:0003075,7.98e-18,82;UBERON:0007284,7.98e-18,82;UBERON:0002346,4.14e-16,86;UBERON:0001049,5.22e-16,56;UBERON:0005068,5.22e-16,56;UBERON:0006241,5.22e-16,56;UBERON:0007135,5.22e-16,56;UBERON:0001017,1.24e-14,81;UBERON:0004638,2.90e-14,18;UBERON:0001986,2.90e-14,18;UBERON:0004852,2.90e-14,18;UBERON:0000073,5.45e-14,53;UBERON:0002616,5.45e-14,53;UBERON:0010314,6.04e-14,132;UBERON:0001016,6.91e-13,89;UBERON:0002780,7.59e-13,41;UBERON:0001890,7.59e-13,41;UBERON:0003080,7.59e-13,41;UBERON:0006240,7.59e-13,41;UBERON:0000025,1.81e-12,192;UBERON:0010371,1.81e-12,104;UBERON:0003056,3.49e-12,61;UBERON:0004111,5.60e-12,240;UBERON:0000955,1.18e-10,68;UBERON:0006238,1.18e-10,68;UBERON:0001893,1.46e-10,34;UBERON:0000487,2.03e-10,22;UBERON:0003528,2.17e-10,34;UBERON:0002020,2.17e-10,34;UBERON:0006914,8.45e-10,25;UBERON:0002791,2.45e-09,32;UBERON:0001869,3.81e-09,32;UBERON:0001009,8.14e-08,112;UBERON:0004121,9.48e-08,171;UBERON:0000924,9.48e-08,171;UBERON:0006601,9.48e-08,171;UBERON:0003915,1.15e-07,9;UBERON:0004700,1.15e-07,9;UBERON:0001917,1.15e-07,9;UBERON:0001638,2.04e-07,9;UBERON:0003920,2.04e-07,9;UBERON:0004582,2.04e-07,9;UBERON:0000483,2.19e-07,306;UBERON:0000119,4.71e-07,309;UBERON:0004535,5.75e-07,109;UBERON:0000055,6.87e-07,68;UBERON:0002619,8.29e-07,22 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,2.62129646556207,0.791300934685361,0.990130823680373,1.32558950291166,0,0,0,0.487932798790507,0.61560529038394,0.204000691244253,0,1.14494394852423,0.273748850145768,0.502170558379211,0,0.0821005894499457,0,0,0.383829398097213,0,0,0,0.369754010166788,0,0,1.17440175733939,0.553995408531877,0.802177789880567,0.651032612147555,0,0,0.257575567634187,0.436194716338694,0.377875943688809,0.727752183563449,0.464858073811369,0.411167888021826,1.54853185447552,1.1507695692886,0.256160706529101,1.41889337933151,0.344745680736619,0.645484683583826,0,0.376484679085209,0.545812300115692,0.898893937780338,0.612167784741805,1.28371610830437,1.27867425159808,0.329851300186716,1.39624560335142,0.426224750532694,0.580418477257168,1.13477044938228,0.622822248995575,1.00499466102697,0.521482918420201,0.65156653411535,1.21079900526674,2.57794345191295,0.632924774881769,0.422510572623884,0.212604299965044,0.209658645508376,0.898629049171961,1.35159203557356,1.12507910687956,0.285012743741249,0.39783335439818,0.365328307529268,0,1.09227722252426,0,0.853460445133014,0.400395987036012,1.72425731986345,0,0,2.84606484554724,1.76171156811282,1.91136614062614,1.32171328579026,0.560508562981536,0,0.393419540227666,0,0,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0.444859689486181,0.802622484269139,1.04535523804977,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,1.40648818027883,0,0,0.434539556882471,0,0,0.756278537312543,0.886917589850256,0.614843499851882,2.22664428346111,0,0,0,0,0,0,0,0,3.9752481473341,1.72046919021225,3.12426451446835,5.08777147731609,4.19499436209906,4.40188867104108,2.92592953151535,3.35941786920128,4.62496141492723,9.70689777017544,6.44526907374635,9.12326526862215,2.19655851793353,5.51494620518803,3.24056779152704,8.12627527385126,8.75664553242062,5.40535106319947,4.5994991239765,2.84779697870439,1.83201743930407,6.58902087180316,19.3890132074163,0,0,0.12663051166458,0,0,1.06400514659507,1.68203280042692,3.20246987189115,0.74000264525148,0.933633106199299,4.31074150623002,2.12500474047496,0.756787138224657,0.576175924479999,0.937285727335186,0,1.1409436430889,0,1.29177948508141,2.10434827678571,0.561803226808994,0.408308342509787,0.61417158655884,2.6864703105699,0,0,0,0,1.17835279767846,0.250237039743928,0,0,0,0.150238058906597,2.38207584636044,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.969876340912871,0,0.10075209822764,0.169560592310488,0,0,0,2.6834215348511,1.98794652482228,2.5562667431294,1.65857688024593,2.52320850875628,4.37972830890996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38155454624648,0,1.2347220339942,0,0,0,4.13552934676983,0,0.860919069801795,0.514703430895577,0,0,0,0.0925884451585296,2.28065813717227,1.03993478527958,0,2.55046890945169,3.75707821554629,3.17606185074362,1.85194205030644,4.75635380586496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.432359860250884,0.25248486685276,8.06423257510547,1.90994212779139,0,3.4214489204541,1.43958489784653,11.7133792559128,5.43070221998099,0.448524337381443,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,4.82303003295338,19.1737360892065,15.9956785891291,0,0,0,0.479249710983165,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,4.31960861178188,3.90419561572865,0,0.167516265334349,0.637938751653163,12.7331194071021,5.9832291840805,19.0631136180576,1.47229790062968,0,0.542530047399471,0.415941723061614,0.178428988797162,0.788512075169673,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0,0,2.06768026122887,1.50999940573032,0,0.303127571446259,1.66435439510497,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0.232420756919918,0.604297247958111,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,4.54933536283586,2.72149928442425,1.51141141271498,0,0.270946437543853,0,0.254876273045038,0,0,0,0,1.28225062558195,0.656029291399411,8.13445986660758,1.54561517471583,1.09883357782012,1.32015199872941,0,0,0,2.41676795730305,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.511359764496605,0.445160178233687,0.165284915360978,0.192190067365106,0,0.4046311234222,0,1.88887408098384,0,0.616067160352178,0,0,0.37064843820784,0.715624433709956,0,0,0,0,0,0,0,0.539617372749944,0.54907405947211,0.589062011728432,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0.6196469961995,0.845086807596724,1.29070216983646,5.01070109166918,0.35667105148125,0,0.422215270595328,0,0.379473173765715,1.74967360122491,0,0,0,1.69458841398202,0,0,0,0.229723400206959,1.52234282769651,3.0585488285695,1.70894156152249,0,0.411362273086194,2.59389324477087,2.70015718619057,1.58625035258854,0,0,0,0,0,0.142283686696828,0,0.399158742865633,0,1.69338866179106,0.324621940274555,0,0,0,0,0,0,0,0,1.37402137902306,0,0,0.166849141711909,2.73543333562856,0,0,0.270455678475983,0,0,0,15.0903424650051,0,0,0.284136146806413,0,2.67268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| ||
|short_description=p2@ST6GALNAC3 | |||
}} | }} |
Latest revision as of 06:17, 19 September 2015
Short description: | p2@ST6GALNAC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ST6GALNAC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_ENST00000328299_5end |
EntrezGene: | ST6GALNAC3 |
HGNC: | 19343 |
UniProt: | Q8NDV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.76e-18 | 24 |
endothelial cell | 7.04e-15 | 36 |
blood vessel endothelial cell | 2.90e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.90e-14 | 18 |
meso-epithelial cell | 6.03e-11 | 45 |
lining cell | 1.73e-09 | 58 |
barrier cell | 1.73e-09 | 58 |
endothelial cell of artery | 1.15e-07 | 9 |