FFCP PHASE1:Hg19::chr3:112359244..112359263,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-481bp_to_uc011bhv.1_5end | |association_with_transcript=-481bp_to_uc011bhv.1_5end | ||
|cluster_id=chr3:112359244..112359263,- | |||
|coexpression_cluster_id=C720 | |||
|description=CAGE_peak_11_at_CCDC80_5end | |description=CAGE_peak_11_at_CCDC80_5end | ||
|id=chr3:112359244..112359263,- | |id=chr3:112359244..112359263,- | ||
|ontology_enrichment_celltype=CL:0000055!3.18e-36!180;CL:0000057!4.04e-23!75;CL:0000680!1.05e-18!57;CL:0000056!1.05e-18!57;CL:0000355!1.05e-18!57;CL:0000187!1.87e-17!54;CL:0000183!3.14e-16!59;CL:0000192!1.05e-14!42;CL:0000514!1.05e-14!42;CL:0000393!1.95e-13!60;CL:0000211!1.95e-13!60;CL:0000359!9.67e-13!32;CL:0002620!6.22e-11!23;CL:0000222!9.73e-10!119;CL:0002334!4.25e-09!12;CL:0002494!1.70e-08!16;CL:0000136!5.64e-08!15;CL:0000048!4.02e-07!430 | |ontology_enrichment_celltype=CL:0000055!3.18e-36!180;CL:0000057!4.04e-23!75;CL:0000680!1.05e-18!57;CL:0000056!1.05e-18!57;CL:0000355!1.05e-18!57;CL:0000187!1.87e-17!54;CL:0000183!3.14e-16!59;CL:0000192!1.05e-14!42;CL:0000514!1.05e-14!42;CL:0000393!1.95e-13!60;CL:0000211!1.95e-13!60;CL:0000359!9.67e-13!32;CL:0002620!6.22e-11!23;CL:0000222!9.73e-10!119;CL:0002334!4.25e-09!12;CL:0002494!1.70e-08!16;CL:0000136!5.64e-08!15;CL:0000048!4.02e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.93e-13;32!CL:0000192;1.34e-11;43!CL:0000134;1.49e-11;55!CL:0000048;6.05e-11;58!CL:0002334;6.16e-11;12!CL:0000187;8.78e-11;55!CL:0000723;1.41e-10;61!CL:0000393;2.09e-09;61!CL:0000211;2.09e-09;61!CL:0002620;2.10e-09;23!CL:0002494;2.43e-09;16!CL:0000057;4.63e-09;73!CL:0002320;1.35e-08;188!CL:0000136;5.59e-08;13!CL:0000034;1.10e-07;69!CL:0000327;3.96e-07;15!CL:0002570;6.31e-07;8!CL:0000499;7.17e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.99e-23,76;CL:0000680,1.41e-21,58;CL:0000056,1.41e-21,58;CL:0000355,1.41e-21,58;CL:0000187,4.92e-20,55;CL:0000048,1.68e-18,427;CL:0000723,1.94e-17,433;CL:0000192,2.33e-16,43;CL:0000514,2.33e-16,43;CL:0000393,2.48e-16,61;CL:0000211,2.48e-16,61;CL:0000034,4.39e-16,441;CL:0000359,3.95e-14,32;CL:0002334,5.96e-11,12;CL:0000222,9.01e-11,121;CL:0000136,1.49e-09,15;CL:0002620,1.76e-09,23;CL:0002494,2.46e-09,16;CL:0002320,1.74e-07,361;CL:0000327,2.96e-07,15;CL:0000499,5.21e-07,28;CL:0002570,6.78e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;1.20e-11;58!CL:0000514;1.34e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.20e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.33e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.62e-19!83;UBERON:0002329!6.62e-19!83;UBERON:0003077!6.62e-19!83;UBERON:0003059!6.62e-19!83;UBERON:0007282!6.62e-19!83;UBERON:0009618!6.62e-19!83;UBERON:0007285!6.62e-19!83;UBERON:0004290!7.40e-19!70;UBERON:0001134!4.77e-18!61;UBERON:0002036!4.77e-18!61;UBERON:0003082!4.77e-18!61;UBERON:0002385!5.75e-18!63;UBERON:0001015!5.75e-18!63;UBERON:0000383!5.75e-18!63;UBERON:0000486!1.06e-16!82;UBERON:0004872!3.60e-13!84;UBERON:0000475!9.81e-11!365;UBERON:0000948!8.39e-10!24;UBERON:0005498!8.39e-10!24;UBERON:0004140!8.39e-10!24;UBERON:0009881!8.39e-10!24;UBERON:0004141!8.39e-10!24;UBERON:0003084!8.39e-10!24;UBERON:0007005!8.39e-10!24;UBERON:0004139!8.39e-10!24;UBERON:0004291!8.39e-10!24;UBERON:0007100!1.48e-09!27;UBERON:0005256!1.52e-09!143;UBERON:0001637!2.31e-09!42;UBERON:0003509!2.31e-09!42;UBERON:0004572!2.31e-09!42;UBERON:0004573!6.52e-09!33;UBERON:0004571!6.52e-09!33;UBERON:0002199!8.08e-09!45;UBERON:0002416!8.08e-09!45;UBERON:0004923!2.23e-08!57;UBERON:0002049!2.43e-08!79;UBERON:0007798!2.43e-08!79;UBERON:0001009!3.20e-08!113;UBERON:0001013!3.97e-08!14;UBERON:0004535!4.55e-08!110;UBERON:0000119!8.47e-08!312;UBERON:0002097!3.90e-07!40;UBERON:0000483!4.13e-07!309;UBERON:0001981!5.83e-07!60;UBERON:0007500!5.83e-07!60;UBERON:0004537!5.83e-07!60;UBERON:0006965!5.83e-07!60;UBERON:0003102!6.69e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.04e-09;14!UBERON:0002384;7.02e-09;198!UBERON:0000948;4.80e-08;22!UBERON:0004573;1.41e-07;33!UBERON:0004571;1.41e-07;33!UBERON:0001637;4.42e-07;42!UBERON:0003509;4.42e-07;42!UBERON:0004572;4.42e-07;42!UBERON:0007100;4.87e-07;25 | |||
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| ||
|short_description=p11@CCDC80 | |short_description=p11@CCDC80 | ||
}} | }} |
Latest revision as of 14:25, 19 September 2015
Short description: | p11@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CCDC80_5end |
Coexpression cluster: | C720_Smooth_Fibroblast_Preadipocyte_Sertoli_Ewing_hepatic_Synoviocyte |
Association with transcript: | -481bp_to_uc011bhv.1_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.99e-23 | 76 |
muscle precursor cell | 1.41e-21 | 58 |
myoblast | 1.41e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.41e-21 | 58 |
muscle cell | 4.92e-20 | 55 |
multi fate stem cell | 1.68e-18 | 427 |
somatic stem cell | 1.94e-17 | 433 |
smooth muscle cell | 2.33e-16 | 43 |
smooth muscle myoblast | 2.33e-16 | 43 |
electrically responsive cell | 2.48e-16 | 61 |
electrically active cell | 2.48e-16 | 61 |
stem cell | 4.39e-16 | 441 |
vascular associated smooth muscle cell | 3.95e-14 | 32 |
preadipocyte | 5.96e-11 | 12 |
mesodermal cell | 9.01e-11 | 121 |
fat cell | 1.49e-09 | 15 |
skin fibroblast | 1.76e-09 | 23 |
cardiocyte | 2.46e-09 | 16 |
connective tissue cell | 1.74e-07 | 361 |
extracellular matrix secreting cell | 2.96e-07 | 15 |
stromal cell | 5.21e-07 | 28 |
mesenchymal stem cell of adipose | 6.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.33e-07 | 14 |