FFCP PHASE1:Hg19::chr3:72977990..72978004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37641 | |HGNC=37641 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-190bp_to_ENST00000492727_5end | |association_with_transcript=-190bp_to_ENST00000492727_5end | ||
|cluster_id=chr3:72977990..72978004,+ | |||
|coexpression_cluster_id=C804 | |||
|description=CAGE_peak_1_at_FTH1P23_5end | |description=CAGE_peak_1_at_FTH1P23_5end | ||
|id=chr3:72977990..72978004,+ | |id=chr3:72977990..72978004,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.71e-20!42;CL:0000839!9.14e-20!70;CL:0002194!1.01e-19!63;CL:0000576!1.01e-19!63;CL:0000040!1.01e-19!63;CL:0000559!1.01e-19!63;CL:0000766!5.56e-19!76;CL:0002009!1.13e-18!65;CL:0000860!1.56e-18!45;CL:0000557!1.91e-17!71;CL:0002371!9.59e-12!591;CL:0000548!2.02e-11!679;CL:0000004!2.02e-11!679;CL:0000255!2.02e-11!679;CL:0000012!1.26e-10!682;CL:0000003!2.05e-10!722;CL:0000144!3.43e-10!625;CL:0000048!1.03e-07!430;CL:0000222!1.40e-07!119;CL:0000763!1.97e-07!112;CL:0000049!1.97e-07!112;CL:0000063!2.00e-07!578;CL:0000723!5.19e-07!436 | |ontology_enrichment_celltype=CL:0002057!3.71e-20!42;CL:0000839!9.14e-20!70;CL:0002194!1.01e-19!63;CL:0000576!1.01e-19!63;CL:0000040!1.01e-19!63;CL:0000559!1.01e-19!63;CL:0000766!5.56e-19!76;CL:0002009!1.13e-18!65;CL:0000860!1.56e-18!45;CL:0000557!1.91e-17!71;CL:0002371!9.59e-12!591;CL:0000548!2.02e-11!679;CL:0000004!2.02e-11!679;CL:0000255!2.02e-11!679;CL:0000012!1.26e-10!682;CL:0000003!2.05e-10!722;CL:0000144!3.43e-10!625;CL:0000048!1.03e-07!430;CL:0000222!1.40e-07!119;CL:0000763!1.97e-07!112;CL:0000049!1.97e-07!112;CL:0000063!2.00e-07!578;CL:0000723!5.19e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.54e-18;39!CL:0000234;1.54e-18;39!CL:0000860;2.74e-18;33!CL:0002057;2.74e-18;33!CL:0000576;1.27e-12;48!CL:0000766;1.16e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.14e-24,48;CL:0000234,4.14e-24,48;CL:0002194,2.16e-21,59;CL:0000576,2.16e-21,59;CL:0000040,2.16e-21,59;CL:0000559,2.16e-21,59;CL:0000839,4.75e-21,66;CL:0000766,1.75e-20,72;CL:0000860,2.27e-20,42;CL:0002057,2.27e-20,42;CL:0002009,4.53e-20,61;CL:0000557,1.36e-18,67;CL:0000048,1.32e-09,427;CL:0000723,7.01e-09,433;CL:0000763,1.85e-08,108;CL:0000049,1.85e-08,108;CL:0000222,4.65e-08,121;CL:0000034,5.01e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.51e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.49e-20!167;UBERON:0002371!3.24e-18!80;UBERON:0000926!3.88e-17!448;UBERON:0004120!3.88e-17!448;UBERON:0006603!3.88e-17!448;UBERON:0002405!4.04e-16!115;UBERON:0004765!4.43e-16!101;UBERON:0001434!4.43e-16!101;UBERON:0002193!7.42e-16!112;UBERON:0001474!9.81e-16!86;UBERON:0003081!2.02e-15!216;UBERON:0002390!1.50e-14!102;UBERON:0003061!1.50e-14!102;UBERON:0000468!1.35e-11!659;UBERON:0000467!1.96e-10!625;UBERON:0000923!2.13e-10!604;UBERON:0005291!2.13e-10!604;UBERON:0006598!2.13e-10!604;UBERON:0002532!2.13e-10!604;UBERON:0002050!3.15e-10!605;UBERON:0005423!3.15e-10!605;UBERON:0000480!3.62e-10!626;UBERON:0000922!6.35e-10!612 | |ontology_enrichment_uberon=UBERON:0002204!1.49e-20!167;UBERON:0002371!3.24e-18!80;UBERON:0000926!3.88e-17!448;UBERON:0004120!3.88e-17!448;UBERON:0006603!3.88e-17!448;UBERON:0002405!4.04e-16!115;UBERON:0004765!4.43e-16!101;UBERON:0001434!4.43e-16!101;UBERON:0002193!7.42e-16!112;UBERON:0001474!9.81e-16!86;UBERON:0003081!2.02e-15!216;UBERON:0002390!1.50e-14!102;UBERON:0003061!1.50e-14!102;UBERON:0000468!1.35e-11!659;UBERON:0000467!1.96e-10!625;UBERON:0000923!2.13e-10!604;UBERON:0005291!2.13e-10!604;UBERON:0006598!2.13e-10!604;UBERON:0002532!2.13e-10!604;UBERON:0002050!3.15e-10!605;UBERON:0005423!3.15e-10!605;UBERON:0000480!3.62e-10!626;UBERON:0000922!6.35e-10!612 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.58e-22,167;UBERON:0002371,1.76e-19,76;UBERON:0004765,4.64e-18,90;UBERON:0000926,9.00e-18,315;UBERON:0004120,9.00e-18,315;UBERON:0006603,9.00e-18,315;UBERON:0001434,1.38e-17,100;UBERON:0001474,9.61e-17,82;UBERON:0002193,1.07e-16,108;UBERON:0002405,2.51e-16,93;UBERON:0002390,2.34e-15,98;UBERON:0003061,2.34e-15,98;UBERON:0003081,2.38e-15,203;UBERON:0002050,6.14e-08,564;UBERON:0000923,8.60e-08,560;UBERON:0010316,8.60e-08,560;UBERON:0005291,8.60e-08,560;UBERON:0006598,8.60e-08,560;UBERON:0010317,8.60e-08,560;UBERON:0002532,8.60e-08,560;UBERON:0005423,9.60e-08,581;UBERON:0000922,3.25e-07,592 | |||
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| ||
|short_description=p1@FTH1P23 | |short_description=p1@FTH1P23 | ||
}} | }} |
Latest revision as of 15:08, 19 September 2015
Short description: | p1@FTH1P23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FTH1P23_5end |
Coexpression cluster: | C804_Smooth_mesenchymal_CD14_Mesenchymal_Cardiac_Adipocyte_Fibroblast |
Association with transcript: | -190bp_to_ENST00000492727_5end |
EntrezGene: | NA |
HGNC: | 37641 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.14e-24 | 48 |
phagocyte | 4.14e-24 | 48 |
monopoietic cell | 2.16e-21 | 59 |
monocyte | 2.16e-21 | 59 |
monoblast | 2.16e-21 | 59 |
promonocyte | 2.16e-21 | 59 |
myeloid lineage restricted progenitor cell | 4.75e-21 | 66 |
myeloid leukocyte | 1.75e-20 | 72 |
classical monocyte | 2.27e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.27e-20 | 42 |
macrophage dendritic cell progenitor | 4.53e-20 | 61 |
granulocyte monocyte progenitor cell | 1.36e-18 | 67 |
multi fate stem cell | 1.32e-09 | 427 |
somatic stem cell | 7.01e-09 | 433 |
myeloid cell | 1.85e-08 | 108 |
common myeloid progenitor | 1.85e-08 | 108 |
mesodermal cell | 4.65e-08 | 121 |
stem cell | 5.01e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.58e-22 | 167 |
bone marrow | 1.76e-19 | 76 |
skeletal element | 4.64e-18 | 90 |
mesoderm | 9.00e-18 | 315 |
mesoderm-derived structure | 9.00e-18 | 315 |
presumptive mesoderm | 9.00e-18 | 315 |
skeletal system | 1.38e-17 | 100 |
bone element | 9.61e-17 | 82 |
hemolymphoid system | 1.07e-16 | 108 |
immune system | 2.51e-16 | 93 |
hematopoietic system | 2.34e-15 | 98 |
blood island | 2.34e-15 | 98 |
lateral plate mesoderm | 2.38e-15 | 203 |
embryonic structure | 6.14e-08 | 564 |
germ layer | 8.60e-08 | 560 |
germ layer / neural crest | 8.60e-08 | 560 |
embryonic tissue | 8.60e-08 | 560 |
presumptive structure | 8.60e-08 | 560 |
germ layer / neural crest derived structure | 8.60e-08 | 560 |
epiblast (generic) | 8.60e-08 | 560 |
developing anatomical structure | 9.60e-08 | 581 |
embryo | 3.25e-07 | 592 |