FFCP PHASE1:Hg19::chr6:70506946..70506957,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55788 | |EntrezGene=55788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23038 | |HGNC=23038 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NUN5 | |UniProt=Q9NUN5 | ||
|association_with_transcript=45bp_to_ENST00000370577_5end | |association_with_transcript=45bp_to_ENST00000370577_5end | ||
|cluster_id=chr6:70506946..70506957,- | |||
|description=CAGE_peak_5_at_LMBRD1_5end | |description=CAGE_peak_5_at_LMBRD1_5end | ||
|id=chr6:70506946..70506957,- | |id=chr6:70506946..70506957,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.16e-07;13 | |ontology_enrichment_celltype_v019=CL:0000136;5.16e-07;13 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.82e-22!115;UBERON:0001049!1.23e-19!57;UBERON:0005068!1.23e-19!57;UBERON:0006241!1.23e-19!57;UBERON:0007135!1.23e-19!57;UBERON:0002616!1.66e-18!59;UBERON:0000955!9.90e-17!69;UBERON:0006238!9.90e-17!69;UBERON:0005743!1.51e-15!86;UBERON:0001017!2.45e-15!82;UBERON:0003075!5.47e-15!86;UBERON:0007284!5.47e-15!86;UBERON:0002346!6.69e-15!90;UBERON:0000073!7.46e-15!94;UBERON:0001016!7.46e-15!94;UBERON:0003080!7.68e-15!42;UBERON:0002780!1.15e-14!41;UBERON:0001890!1.15e-14!41;UBERON:0006240!1.15e-14!41;UBERON:0000033!1.16e-14!123;UBERON:0000153!1.09e-13!129;UBERON:0007811!1.09e-13!129;UBERON:0000475!1.25e-12!365;UBERON:0001893!2.13e-12!34;UBERON:0000924!4.38e-12!173;UBERON:0006601!4.38e-12!173;UBERON:0004121!5.70e-12!169;UBERON:0003056!9.13e-12!61;UBERON:0002020!9.28e-12!34;UBERON:0003528!9.28e-12!34;UBERON:0002791!9.28e-12!33;UBERON:0001869!2.92e-11!32;UBERON:0000477!4.13e-11!286;UBERON:0004111!2.55e-09!241;UBERON:0000468!3.45e-09!659;UBERON:0000481!3.46e-09!347;UBERON:0001950!1.69e-08!20;UBERON:0000956!2.80e-08!25;UBERON:0000203!2.80e-08!25;UBERON:0000025!3.14e-08!194;UBERON:0000467!3.60e-08!625;UBERON:0000480!3.65e-08!626;UBERON:0000062!5.40e-08!511;UBERON:0002619!7.40e-08!22;UBERON:0000119!3.43e-07!312;UBERON:0000923!4.65e-07!604;UBERON:0005291!4.65e-07!604;UBERON:0006598!4.65e-07!604;UBERON:0002532!4.65e-07!604;UBERON:0000483!5.01e-07!309;UBERON:0002050!6.74e-07!605;UBERON:0005423!6.74e-07!605 | |ontology_enrichment_uberon=UBERON:0007023!2.82e-22!115;UBERON:0001049!1.23e-19!57;UBERON:0005068!1.23e-19!57;UBERON:0006241!1.23e-19!57;UBERON:0007135!1.23e-19!57;UBERON:0002616!1.66e-18!59;UBERON:0000955!9.90e-17!69;UBERON:0006238!9.90e-17!69;UBERON:0005743!1.51e-15!86;UBERON:0001017!2.45e-15!82;UBERON:0003075!5.47e-15!86;UBERON:0007284!5.47e-15!86;UBERON:0002346!6.69e-15!90;UBERON:0000073!7.46e-15!94;UBERON:0001016!7.46e-15!94;UBERON:0003080!7.68e-15!42;UBERON:0002780!1.15e-14!41;UBERON:0001890!1.15e-14!41;UBERON:0006240!1.15e-14!41;UBERON:0000033!1.16e-14!123;UBERON:0000153!1.09e-13!129;UBERON:0007811!1.09e-13!129;UBERON:0000475!1.25e-12!365;UBERON:0001893!2.13e-12!34;UBERON:0000924!4.38e-12!173;UBERON:0006601!4.38e-12!173;UBERON:0004121!5.70e-12!169;UBERON:0003056!9.13e-12!61;UBERON:0002020!9.28e-12!34;UBERON:0003528!9.28e-12!34;UBERON:0002791!9.28e-12!33;UBERON:0001869!2.92e-11!32;UBERON:0000477!4.13e-11!286;UBERON:0004111!2.55e-09!241;UBERON:0000468!3.45e-09!659;UBERON:0000481!3.46e-09!347;UBERON:0001950!1.69e-08!20;UBERON:0000956!2.80e-08!25;UBERON:0000203!2.80e-08!25;UBERON:0000025!3.14e-08!194;UBERON:0000467!3.60e-08!625;UBERON:0000480!3.65e-08!626;UBERON:0000062!5.40e-08!511;UBERON:0002619!7.40e-08!22;UBERON:0000119!3.43e-07!312;UBERON:0000923!4.65e-07!604;UBERON:0005291!4.65e-07!604;UBERON:0006598!4.65e-07!604;UBERON:0002532!4.65e-07!604;UBERON:0000483!5.01e-07!309;UBERON:0002050!6.74e-07!605;UBERON:0005423!6.74e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.58e-13;34!UBERON:0000073;6.21e-13;53!UBERON:0002616;6.21e-13;53!UBERON:0002780;7.38e-12;41!UBERON:0001890;7.38e-12;41!UBERON:0001950;8.44e-12;20!UBERON:0001869;1.19e-11;32!UBERON:0002791;1.83e-11;32!UBERON:0003528;2.81e-11;34!UBERON:0002020;2.81e-11;34!UBERON:0002619;2.17e-10;22!UBERON:0000956;5.55e-10;25!UBERON:0000203;5.55e-10;25!UBERON:0001017;2.85e-09;75!UBERON:0000955;1.44e-08;68!UBERON:0007023;1.71e-08;114!UBERON:0000200;4.87e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0001893;2.58e-13;34!UBERON:0000073;6.21e-13;53!UBERON:0002616;6.21e-13;53!UBERON:0002780;7.38e-12;41!UBERON:0001890;7.38e-12;41!UBERON:0001950;8.44e-12;20!UBERON:0001869;1.19e-11;32!UBERON:0002791;1.83e-11;32!UBERON:0003528;2.81e-11;34!UBERON:0002020;2.81e-11;34!UBERON:0002619;2.17e-10;22!UBERON:0000956;5.55e-10;25!UBERON:0000203;5.55e-10;25!UBERON:0001017;2.85e-09;75!UBERON:0000955;1.44e-08;68!UBERON:0007023;1.71e-08;114!UBERON:0000200;4.87e-08;6 | ||
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| ||
|short_description=p5@LMBRD1 | |short_description=p5@LMBRD1 | ||
}} | }} |
Latest revision as of 15:14, 19 September 2015
Short description: | p5@LMBRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LMBRD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000370577_5end |
EntrezGene: | LMBRD1 |
HGNC: | 23038 |
UniProt: | Q9NUN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data