FFCP PHASE1:Hg19::chr6:70576438..70576454,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:70576438..70576454,+ to FFCP PHASE1:Hg19::chr6:70576438..70576454,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1310 | |EntrezGene=1310 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2196 | |HGNC=2196 | ||
|TSSclassifier=strong | |||
|UniProt=Q14993 | |UniProt=Q14993 | ||
|association_with_transcript=0bp_to_NM_001858,uc003pfc.1_5end | |||
|cluster_id=chr6:70576438..70576454,+ | |||
|coexpression_cluster_id=C2867 | |||
|description=CAGE_peak_1_at_COL19A1_5end | |||
|id=chr6:70576438..70576454,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.66e-15!24;CL:0000826!4.66e-15!24;CL:0000236!4.34e-12!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.54e-23;24!CL:0000236;1.13e-16;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.38e-23,24;CL:0000826,4.38e-23,24;CL:0000236,6.11e-18,14;CL:0000542,1.35e-08,53;CL:0000051,1.35e-08,53;CL:0000838,6.04e-08,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.13e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-46!115;UBERON:0001049!1.74e-22!57;UBERON:0005068!1.74e-22!57;UBERON:0006241!1.74e-22!57;UBERON:0007135!1.74e-22!57;UBERON:0001017!6.80e-21!82;UBERON:0005743!1.76e-20!86;UBERON:0002616!9.49e-20!59;UBERON:0000073!2.58e-19!94;UBERON:0001016!2.58e-19!94;UBERON:0003080!1.32e-18!42;UBERON:0000955!2.15e-18!69;UBERON:0006238!2.15e-18!69;UBERON:0002780!3.07e-18!41;UBERON:0001890!3.07e-18!41;UBERON:0006240!3.07e-18!41;UBERON:0002020!2.15e-17!34;UBERON:0003528!2.15e-17!34;UBERON:0001893!2.61e-17!34;UBERON:0001869!7.87e-17!32;UBERON:0002791!1.00e-16!33;UBERON:0002619!1.04e-14!22;UBERON:0002346!1.22e-14!90;UBERON:0003075!2.21e-14!86;UBERON:0007284!2.21e-14!86;UBERON:0001950!2.05e-13!20;UBERON:0000956!7.25e-13!25;UBERON:0000203!7.25e-13!25;UBERON:0000178!2.39e-12!15;UBERON:0000179!2.39e-12!15;UBERON:0000463!2.39e-12!15;UBERON:0000924!1.22e-10!173;UBERON:0006601!1.22e-10!173;UBERON:0003056!1.76e-10!61;UBERON:0004121!2.62e-10!169;UBERON:0000153!8.26e-10!129;UBERON:0007811!8.26e-10!129;UBERON:0000033!6.31e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.41e-21;22!UBERON:0001869;1.78e-20;32!UBERON:0001950;2.67e-19;20!UBERON:0002791;5.12e-19;32!UBERON:0003528;1.97e-18;34!UBERON:0002020;1.97e-18;34!UBERON:0001893;4.46e-18;34!UBERON:0000178;4.71e-18;15!UBERON:0000179;4.71e-18;15!UBERON:0000463;4.71e-18;15!UBERON:0000956;6.14e-18;25!UBERON:0000203;6.14e-18;25!UBERON:0002780;3.09e-15;41!UBERON:0001890;3.09e-15;41!UBERON:0000922;1.84e-12;49!UBERON:0000073;2.01e-12;53!UBERON:0002616;2.01e-12;53!UBERON:0002390;5.43e-12;32!UBERON:0007023;1.52e-10;114!UBERON:0001017;8.63e-10;75!UBERON:0000955;9.88e-09;68!UBERON:0001016;1.10e-07;83!UBERON:0001871;1.67e-07;6!UBERON:0002193;4.14e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.28e-37,114;UBERON:0001869,7.09e-23,32;UBERON:0001049,1.16e-22,56;UBERON:0005068,1.16e-22,56;UBERON:0006241,1.16e-22,56;UBERON:0007135,1.16e-22,56;UBERON:0000073,7.94e-22,53;UBERON:0002616,7.94e-22,53;UBERON:0002619,1.51e-21,22;UBERON:0002791,4.65e-21,32;UBERON:0001893,4.80e-21,34;UBERON:0003528,6.78e-21,34;UBERON:0002020,6.78e-21,34;UBERON:0002780,1.18e-20,41;UBERON:0001890,1.18e-20,41;UBERON:0003080,1.18e-20,41;UBERON:0006240,1.18e-20,41;UBERON:0001950,1.42e-19,20;UBERON:0000956,3.05e-18,25;UBERON:0000203,3.05e-18,25;UBERON:0000178,5.96e-18,15;UBERON:0000179,5.96e-18,15;UBERON:0000463,5.96e-18,15;UBERON:0001017,8.41e-18,81;UBERON:0000955,1.33e-16,68;UBERON:0006238,1.33e-16,68;UBERON:0001016,1.08e-15,89;UBERON:0002346,2.67e-15,86;UBERON:0003075,1.42e-14,82;UBERON:0007284,1.42e-14,82;UBERON:0003056,5.67e-11,61;UBERON:0010371,1.99e-10,104;UBERON:0004121,5.65e-09,171;UBERON:0000924,5.65e-09,171;UBERON:0006601,5.65e-09,171;UBERON:0011216,7.44e-09,223;UBERON:0010314,3.87e-08,132;UBERON:0001871,1.22e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,28.1201333152461,27.0110939290322,30.7759154936486,0,0,0.464448369948228,0,0,0,0,1.13735385989937,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0.232429036905685,1.6446715520873,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0,0,65.1186104506894,58.9829700163102,80.9453421015835,55.9016591562124,68.8681097701941,66.0965305947656,58.8329936778527,62.967547799334,214.024076385153,119.209149442301,127.679258193826,0,1.12101712596307,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06502877754984,0.201504196455281,0,0,0,0,0,0.265059536642971,0.348581828608555,0.414644220061482,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.190493682876507,0,0,0,1.13110241973656,0.300343057843917,8.57479297891735,0,0,0.07333828582095,0,0,0,4.78688609852767,12.4808924293639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,1.91699884393266,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,3.04913549066956,6.50699269288109,1.54657762555539,0.670065061337395,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.946214490203608,0.585707074963566,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,9.09779314940704,6.03999762292127,5.01619521676188,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.64341568457443,0,0,0,0,0.519254429183621,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,1.25671933779759,2.46477787383431,0.767518373630648,0,0,0.725083469571143,0.170453254832202,2.49289699810865,0,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.818999468447914,0,0,0,0,0,0,0.655894752046633,2.63783490051515,0.6196469961995,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,4.58782324285425,4.5571774973933,9.05280746739598,12.752230465672,5.18778648954174,6.48037724685738,4.75875105776562,0,0,0,7.61793018015447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0,9.37652347340122,0,0,0,0,0.593929361665277,0,4.97073823883149,1.82870241333667,0,16.480387422676,0.211125408127993,0.597743964753209,32.6015020326754,0,0.20453736500431,7.75434274404738,0,0,0,0,17.3612393921003,4.7896618469388,0,4.84666373047609,0.834912883456661,0,0,0,0.724999575434793,0,0,0,0.344743373241465,37.9085997398231,14.0636245895967,11.5146380155799,3.85908603601305,30.5163472634166,20.5677423472078,16.8462142803522,2.4132393686937,0,0,0.0769502585037971,0.341826167541004,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.707660516026713,9.16545217400438,9.78519724646052,10.6264987493992,11.9041022436219,0.269604531922708,6.42062117839031,3.04543779442941,8.75782988235197,0,0,0.789168805698781,4.83962864194656,3.97894590119637,0.252746318513952,2.85614496887536,1.45163467956146,0,3.64091151463049,0.313932918407225,1.19472429772959,0,0,0,0,0,0.698906672968121,2.23581842213102,0,0,0,1.35784623083787,0,3.61569185248852,0,0.19871461170299,3.16553979779394,0,0.0801588202515337,0.426905989478705,1.39866726707491,0,0,0,0,0,0,0,0,0,0.288950589901519,3.00210144354895,0.410716136675979,0,0,0,4.18923601908381,1.14580212005842,5.74298419661451,2.1964690054889,3.86303443322914,1.56220020209311,11.0180894878231,0,0,0,0,0,0.295282444544246,2.03215996957883,12.7236750369489,1.90684768556206,0.160753148465019,0,0,3.14963448172101,2.32140586367385,3.09822738955926,0,1.89133697518076,2.7800931711549,0,0,0,4.2881719582402,4.63464379255802,0,0,0,1.30634944043764,0,0,0,0,0,0,0.775697738169303,1.58679122091228,0,0,0.106787412567695,1.41483874589699,0.414239055347196,11.4118185016749,4.34745590175477,0,0,0,0,0,0,0,1.77213635993397,3.66078794705889,1.502291168478,1.14681839138014,1.10929051536852,0.745156835296601,22.8275247644781,0,1.51649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0.389720617678777,0,0.163565394255844,9.82829546539238,0,0,0.19998739585493,0.213383459388282,1.89436477626897,0,0,0,0,0,0.107824811396682,0.157265941855896,0.764467467344097,1.35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| 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| ||
|short_description=p1@COL19A1 | |||
}} | }} |
Latest revision as of 15:18, 19 September 2015
Short description: | p1@COL19A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL19A1_5end |
Coexpression cluster: | C2867_neuroectodermal_CD19_smooth_carcinoid_cerebellum_umbilical_appendix |
Association with transcript: | 0bp_to_NM_001858, uc003pfc.1_5end |
EntrezGene: | COL19A1 |
HGNC: | 2196 |
UniProt: | Q14993 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.38e-23 | 24 |
pro-B cell | 4.38e-23 | 24 |
B cell | 6.11e-18 | 14 |
lymphocyte | 1.35e-08 | 53 |
common lymphoid progenitor | 1.35e-08 | 53 |
lymphoid lineage restricted progenitor cell | 6.04e-08 | 52 |